RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 LONRF2Q1L5Z9 754 aa13.21□□□□□ -0.29
SCARB1-204ENST00000535005 SPECC1LQ69YQ0 1117 aa13.21□□□□□ -0.29
SCARB1-204ENST00000535005 GBP6Q6ZN66 633 aa13.21□□□□□ -0.29
SCARB1-204ENST00000535005 FBXL13Q8NEE6 735 aa13.21□□□□□ -0.29
SCARB1-204ENST00000535005 C18orf25Q96B23 403 aaPredicted RBP13.21□□□□□ -0.29
SCARB1-204ENST00000535005 ZNF689Q96CS4 500 aaPredicted RBP13.21□□□□□ -0.29
SCARB1-204ENST00000535005 FAM84AQ96KN4 292 aa13.21□□□□□ -0.29
SCARB1-204ENST00000535005 PANX2Q96RD6 677 aa13.21□□□□□ -0.29
SCARB1-204ENST00000535005 SLC9A7Q96T83 725 aa13.21□□□□□ -0.29
SCARB1-204ENST00000535005 GDF15Q99988 308 aa13.21□□□□□ -0.29
SCARB1-204ENST00000535005 MRPL9Q9BYD2 267 aaKnown RBP13.21□□□□□ -0.29
SCARB1-204ENST00000535005 YY1AP1Q9H869 796 aa13.21□□□□□ -0.29
SCARB1-204ENST00000535005 MMRN2Q9H8L6 949 aa13.21□□□□□ -0.29
SCARB1-204ENST00000535005 RC3H2Q9HBD1 1191 aaKnown RBP13.21□□□□□ -0.29
SCARB1-204ENST00000535005 CXXC1Q9P0U4 656 aaPredicted RBP13.21□□□□□ -0.29
SCARB1-204ENST00000535005 SIX4Q9UIU6 781 aa13.21□□□□□ -0.29
SCARB1-204ENST00000535005 TRIP11Q15643 1979 aa13.21□□□□□ -0.3
SCARB1-204ENST00000535005 ANO9A1A5B4 782 aa13.2□□□□□ -0.3
SCARB1-204ENST00000535005 ZBBXA8MT70 800 aa13.2□□□□□ -0.3
SCARB1-204ENST00000535005 PES1O00541 588 aaKnown RBP13.2□□□□□ -0.3
SCARB1-204ENST00000535005 SEC31AO94979 1220 aaKnown RBP13.2□□□□□ -0.3
SCARB1-204ENST00000535005 POMCP01189 267 aa13.2□□□□□ -0.3
SCARB1-204ENST00000535005 RPL9P32969 192 aaKnown RBP13.2□□□□□ -0.3
SCARB1-204ENST00000535005 SOX4Q06945 474 aaPredicted RBP13.2□□□□□ -0.3
SCARB1-204ENST00000535005 DSC1Q08554 894 aa13.2□□□□□ -0.3
SCARB1-204ENST00000535005 KCNMA1Q12791 1236 aa13.2□□□□□ -0.3
SCARB1-204ENST00000535005 TUSC3Q13454 348 aa13.2□□□□□ -0.3
SCARB1-204ENST00000535005 BIRC3Q13489 604 aa13.2□□□□□ -0.3
SCARB1-204ENST00000535005 EXOC3L4Q17RC7 722 aa13.2□□□□□ -0.3
SCARB1-204ENST00000535005 SRLQ86TD4 932 aa13.2□□□□□ -0.3
SCARB1-204ENST00000535005 EHBP1Q8NDI1 1231 aa13.2□□□□□ -0.3
SCARB1-204ENST00000535005 LMO3Q8TAP4 145 aa13.2□□□□□ -0.3
SCARB1-204ENST00000535005 TAS1R2Q8TE23 839 aa13.2□□□□□ -0.3
SCARB1-204ENST00000535005 TBC1D13Q9NVG8 400 aa13.2□□□□□ -0.3
SCARB1-204ENST00000535005 RAB20Q9NX57 234 aa13.2□□□□□ -0.3
SCARB1-204ENST00000535005 TUBGCP4Q9UGJ1 667 aa13.2□□□□□ -0.3
SCARB1-204ENST00000535005 ADAM21Q9UKJ8 722 aa13.2□□□□□ -0.3
SCARB1-204ENST00000535005 INPP5FQ9Y2H2 1132 aa13.2□□□□□ -0.3
SCARB1-204ENST00000535005 SIK3Q9Y2K2 1263 aa13.2□□□□□ -0.3
SCARB1-204ENST00000535005 SLC4A7Q9Y6M7 1214 aa13.2□□□□□ -0.3
SCARB1-204ENST00000535005 PDCD11Q14690 1871 aaKnown RBP13.2□□□□□ -0.3
SCARB1-204ENST00000535005 MYO1CO00159 1063 aa13.2□□□□□ -0.3
SCARB1-204ENST00000535005 TULP1O00294 542 aaPredicted RBP13.2□□□□□ -0.3
SCARB1-204ENST00000535005 PHACTR2O75167 634 aa13.2□□□□□ -0.3
SCARB1-204ENST00000535005 UPP2O95045 317 aa13.2□□□□□ -0.3
SCARB1-204ENST00000535005 GJB5O95377 273 aa13.2□□□□□ -0.3
SCARB1-204ENST00000535005 STAU1O95793 577 aaKnown RBP13.2□□□□□ -0.3
SCARB1-204ENST00000535005 CST3P01034 146 aaPredicted RBP13.2□□□□□ -0.3
SCARB1-204ENST00000535005 HLA-DRAP01903 254 aa13.2□□□□□ -0.3
SCARB1-204ENST00000535005 CCDC175P0C221 793 aa13.2□□□□□ -0.3
SCARB1-204ENST00000535005 TNNT3P45378 269 aaPredicted RBP13.2□□□□□ -0.3
SCARB1-204ENST00000535005 GATMP50440 423 aa13.2□□□□□ -0.3
SCARB1-204ENST00000535005 RBP5P82980 135 aa13.2□□□□□ -0.3
SCARB1-204ENST00000535005 HTRA4P83105 476 aaPredicted RBP13.2□□□□□ -0.3
SCARB1-204ENST00000535005 NCOA4Q13772 614 aa13.2□□□□□ -0.3
SCARB1-204ENST00000535005 DPY19L2P1Q6NXN4 242 aa13.2□□□□□ -0.3
SCARB1-204ENST00000535005 TAF4BQ92750 862 aa13.2□□□□□ -0.3
SCARB1-204ENST00000535005 SEMA4DQ92854 862 aa13.2□□□□□ -0.3
SCARB1-204ENST00000535005 DDX27Q96GQ7 796 aaKnown RBP13.2□□□□□ -0.3
SCARB1-204ENST00000535005 UROC1Q96N76 676 aa13.2□□□□□ -0.3
SCARB1-204ENST00000535005 TBKBP1A7MCY6 615 aa13.19□□□□□ -0.3
SCARB1-204ENST00000535005 H0YGN5 161 aa13.19□□□□□ -0.3
SCARB1-204ENST00000535005 PIRO00625 290 aa13.19□□□□□ -0.3
SCARB1-204ENST00000535005 FANCGO15287 622 aa13.19□□□□□ -0.3
SCARB1-204ENST00000535005 ZC3H11AO75152 810 aaKnown RBP eCLIP13.19□□□□□ -0.3
SCARB1-204ENST00000535005 ITGB3P05106 788 aa13.19□□□□□ -0.3
SCARB1-204ENST00000535005 PAX3P23760 479 aa13.19□□□□□ -0.3
SCARB1-204ENST00000535005 PON1P27169 355 aa13.19□□□□□ -0.3
SCARB1-204ENST00000535005 ATICP31939 592 aa13.19□□□□□ -0.3
SCARB1-204ENST00000535005 GUCY2FP51841 1108 aa13.19□□□□□ -0.3
SCARB1-204ENST00000535005 SGSM1Q2NKQ1 1148 aa13.19□□□□□ -0.3
SCARB1-204ENST00000535005 C9orf57Q5W0N0 161 aa13.19□□□□□ -0.3
SCARB1-204ENST00000535005 CMTR2Q8IYT2 770 aaKnown RBP13.19□□□□□ -0.3
SCARB1-204ENST00000535005 LRRC52Q8N7C0 313 aa13.19□□□□□ -0.3
SCARB1-204ENST00000535005 FAXDC2Q96IV6 333 aa13.19□□□□□ -0.3
SCARB1-204ENST00000535005 VRTNQ9H8Y1 702 aa13.19□□□□□ -0.3
SCARB1-204ENST00000535005 MED4Q9NPJ6 270 aa13.19□□□□□ -0.3
SCARB1-204ENST00000535005 PLCB1Q9NQ66 1216 aa13.19□□□□□ -0.3
SCARB1-204ENST00000535005 GCNT4Q9P109 453 aa13.19□□□□□ -0.3
SCARB1-204ENST00000535005 DDHD2O94830 711 aa13.18□□□□□ -0.3
SCARB1-204ENST00000535005 ASS1P00966 412 aaKnown RBP13.18□□□□□ -0.3
SCARB1-204ENST00000535005 BMP8BP34820 402 aa13.18□□□□□ -0.3
SCARB1-204ENST00000535005 TRPC3Q13507 836 aa13.18□□□□□ -0.3
SCARB1-204ENST00000535005 COL4A6Q14031 1691 aa13.18□□□□□ -0.3
SCARB1-204ENST00000535005 SCARA3Q6AZY7 606 aa13.18□□□□□ -0.3
SCARB1-204ENST00000535005 ITIH6Q6UXX5 1313 aa13.18□□□□□ -0.3
SCARB1-204ENST00000535005 ZNF280BQ86YH2 543 aa13.18□□□□□ -0.3
SCARB1-204ENST00000535005 HERC6Q8IVU3 1022 aa13.18□□□□□ -0.3
SCARB1-204ENST00000535005 COLGALT2Q8IYK4 626 aa13.18□□□□□ -0.3
SCARB1-204ENST00000535005 LRRC43Q8N309 656 aa13.18□□□□□ -0.3
SCARB1-204ENST00000535005 TMEM175Q9BSA9 504 aa13.18□□□□□ -0.3
SCARB1-204ENST00000535005 CRACR2AQ9BSW2 395 aa13.18□□□□□ -0.3
SCARB1-204ENST00000535005 INTS2Q9H0H0 1204 aaKnown RBP13.18□□□□□ -0.3
SCARB1-204ENST00000535005 XYLT2Q9H1B5 865 aa13.18□□□□□ -0.3
SCARB1-204ENST00000535005 MYO1AQ9UBC5 1043 aa13.18□□□□□ -0.3
SCARB1-204ENST00000535005 CDC23Q9UJX2 597 aa13.18□□□□□ -0.3
SCARB1-204ENST00000535005 AGAP1Q9UPQ3 857 aa13.18□□□□□ -0.3
SCARB1-204ENST00000535005 SLC9A1P19634 815 aa13.18□□□□□ -0.3
SCARB1-204ENST00000535005 MCM3P25205 808 aa13.18□□□□□ -0.3
SCARB1-204ENST00000535005 POLR2BP30876 1174 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms