RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 EVPLQ92817 2033 aa14.28□□□□□ -0.12
BEST1-208ENST00000534553 SPOPO43791 374 aa14.28□□□□□ -0.12
BEST1-208ENST00000534553 DUSP11O75319 330 aaKnown RBP14.28□□□□□ -0.12
BEST1-208ENST00000534553 CALB1P05937 261 aa14.28□□□□□ -0.12
BEST1-208ENST00000534553 COMTP21964 271 aa14.28□□□□□ -0.12
BEST1-208ENST00000534553 EIF4BP23588 611 aaKnown RBP14.28□□□□□ -0.12
BEST1-208ENST00000534553 EPHB4P54760 987 aa14.28□□□□□ -0.12
BEST1-208ENST00000534553 ADAM17P78536 824 aa14.28□□□□□ -0.12
BEST1-208ENST00000534553 CRHR2Q13324 411 aa14.28□□□□□ -0.12
BEST1-208ENST00000534553 NNTQ13423 1086 aa14.28□□□□□ -0.12
BEST1-208ENST00000534553 MESDQ14696 234 aa14.28□□□□□ -0.12
BEST1-208ENST00000534553 PRAMEF19Q5SWL8 479 aa14.28□□□□□ -0.12
BEST1-208ENST00000534553 SEL1L2Q5TEA6 688 aa14.28□□□□□ -0.12
BEST1-208ENST00000534553 NAA35Q5VZE5 725 aa14.28□□□□□ -0.12
BEST1-208ENST00000534553 C1orf127Q8N9H9 656 aa14.28□□□□□ -0.12
BEST1-208ENST00000534553 TMEM35BQ8NCS4 154 aa14.28□□□□□ -0.12
BEST1-208ENST00000534553 CD101Q93033 1021 aa14.28□□□□□ -0.12
BEST1-208ENST00000534553 CYFIP2Q96F07 1278 aa14.28□□□□□ -0.12
BEST1-208ENST00000534553 SMARCAL1Q9NZC9 954 aa14.28□□□□□ -0.12
BEST1-208ENST00000534553 ADAM22Q9P0K1 906 aa14.28□□□□□ -0.12
BEST1-208ENST00000534553 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.28□□□□□ -0.12
BEST1-208ENST00000534553 UMODL1Q5DID0 1318 aa14.28□□□□□ -0.12
BEST1-208ENST00000534553 MYO1FO00160 1098 aa14.27□□□□□ -0.12
BEST1-208ENST00000534553 GPR32O75388 356 aa14.27□□□□□ -0.12
BEST1-208ENST00000534553 NFICP08651 508 aa14.27□□□□□ -0.12
BEST1-208ENST00000534553 KRT19P08727 400 aa14.27□□□□□ -0.12
BEST1-208ENST00000534553 DARSP14868 501 aaKnown RBP14.27□□□□□ -0.12
BEST1-208ENST00000534553 CDH5P33151 784 aaPredicted RBP14.27□□□□□ -0.12
BEST1-208ENST00000534553 YARSP54577 528 aaKnown RBP14.27□□□□□ -0.12
BEST1-208ENST00000534553 TAP1Q03518 808 aa14.27□□□□□ -0.12
BEST1-208ENST00000534553 CASP8Q14790 479 aa14.27□□□□□ -0.12
BEST1-208ENST00000534553 FSCN1Q16658 493 aaKnown RBP14.27□□□□□ -0.12
BEST1-208ENST00000534553 SLC10A6Q3KNW5 377 aa14.27□□□□□ -0.12
BEST1-208ENST00000534553 JADE1Q6IE81 842 aa14.27□□□□□ -0.12
BEST1-208ENST00000534553 CATSPER4Q7RTX7 472 aa14.27□□□□□ -0.12
BEST1-208ENST00000534553 CPB2Q96IY4 423 aa14.27□□□□□ -0.12
BEST1-208ENST00000534553 RUNDC3BQ96NL0 473 aa14.27□□□□□ -0.12
BEST1-208ENST00000534553 KRT12Q99456 494 aa14.27□□□□□ -0.12
BEST1-208ENST00000534553 GDF3Q9NR23 364 aa14.27□□□□□ -0.12
BEST1-208ENST00000534553 PARVAQ9NVD7 372 aa14.27□□□□□ -0.12
BEST1-208ENST00000534553 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.27□□□□□ -0.12
BEST1-208ENST00000534553 ANAPC7Q9UJX3 599 aa14.27□□□□□ -0.12
BEST1-208ENST00000534553 PCDHA3Q9Y5H8 950 aa14.27□□□□□ -0.12
BEST1-208ENST00000534553 C17orf102A2RUQ5 167 aa14.27□□□□□ -0.13
BEST1-208ENST00000534553 HEXIM1O94992 359 aaKnown RBP14.27□□□□□ -0.13
BEST1-208ENST00000534553 FGGP02679 453 aa14.27□□□□□ -0.13
BEST1-208ENST00000534553 ITGB3P05106 788 aa14.27□□□□□ -0.13
BEST1-208ENST00000534553 HOXC8P31273 242 aa14.27□□□□□ -0.13
BEST1-208ENST00000534553 RWDD2BP57060 319 aa14.27□□□□□ -0.13
BEST1-208ENST00000534553 RBP5P82980 135 aa14.27□□□□□ -0.13
BEST1-208ENST00000534553 LACTBP83111 547 aaPredicted RBP14.27□□□□□ -0.13
BEST1-208ENST00000534553 PAK2Q13177 524 aa14.27□□□□□ -0.13
BEST1-208ENST00000534553 CCL14Q16627 93 aa14.27□□□□□ -0.13
BEST1-208ENST00000534553 KIZQ2M2Z5 673 aa14.27□□□□□ -0.13
BEST1-208ENST00000534553 MFSD14CQ5VZR4 134 aa14.27□□□□□ -0.13
BEST1-208ENST00000534553 PLEKHA7Q6IQ23 1121 aa14.27□□□□□ -0.13
BEST1-208ENST00000534553 TAF2Q6P1X5 1199 aa14.27□□□□□ -0.13
BEST1-208ENST00000534553 CDR2LQ86X02 465 aaPredicted RBP14.27□□□□□ -0.13
BEST1-208ENST00000534553 REM2Q8IYK8 340 aaPredicted RBP14.27□□□□□ -0.13
BEST1-208ENST00000534553 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.27□□□□□ -0.13
BEST1-208ENST00000534553 CPA5Q8WXQ8 436 aa14.27□□□□□ -0.13
BEST1-208ENST00000534553 ELMO3Q96BJ8 720 aa14.27□□□□□ -0.13
BEST1-208ENST00000534553 SPC25Q9HBM1 224 aa14.27□□□□□ -0.13
BEST1-208ENST00000534553 DMGDHQ9UI17 866 aaKnown RBP14.27□□□□□ -0.13
BEST1-208ENST00000534553 SIX4Q9UIU6 781 aa14.27□□□□□ -0.13
BEST1-208ENST00000534553 STRIP2Q9ULQ0 834 aa14.27□□□□□ -0.13
BEST1-208ENST00000534553 KAT6AQ92794 2004 aa14.26□□□□□ -0.13
BEST1-208ENST00000534553 SPDYE4A6NLX3 237 aa14.26□□□□□ -0.13
BEST1-208ENST00000534553 ATMINO43313 823 aaPredicted RBP14.26□□□□□ -0.13
BEST1-208ENST00000534553 SASH3O75995 380 aa14.26□□□□□ -0.13
BEST1-208ENST00000534553 MYL3P08590 195 aa14.26□□□□□ -0.13
BEST1-208ENST00000534553 MMP8P22894 467 aa14.26□□□□□ -0.13
BEST1-208ENST00000534553 RRM1P23921 792 aa14.26□□□□□ -0.13
BEST1-208ENST00000534553 POLR2BP30876 1174 aaKnown RBP14.26□□□□□ -0.13
BEST1-208ENST00000534553 MAN1A1P33908 653 aa14.26□□□□□ -0.13
BEST1-208ENST00000534553 PEX5P50542 639 aa14.26□□□□□ -0.13
BEST1-208ENST00000534553 MYO1EQ12965 1108 aa14.26□□□□□ -0.13
BEST1-208ENST00000534553 PTP4A2Q12974 167 aa14.26□□□□□ -0.13
BEST1-208ENST00000534553 CUL1Q13616 776 aa14.26□□□□□ -0.13
BEST1-208ENST00000534553 WDR72Q3MJ13 1102 aa14.26□□□□□ -0.13
BEST1-208ENST00000534553 TMEM192Q8IY95 271 aa14.26□□□□□ -0.13
BEST1-208ENST00000534553 AENQ8WTP8 325 aaKnown RBP14.26□□□□□ -0.13
BEST1-208ENST00000534553 MAIP1Q8WWC4 291 aa14.26□□□□□ -0.13
BEST1-208ENST00000534553 PPP1R16BQ96T49 567 aa14.26□□□□□ -0.13
BEST1-208ENST00000534553 FAM49AQ9H0Q0 323 aaPredicted RBP14.26□□□□□ -0.13
BEST1-208ENST00000534553 LHX5Q9H2C1 402 aa14.26□□□□□ -0.13
BEST1-208ENST00000534553 ABT1Q9ULW3 272 aaKnown RBP14.26□□□□□ -0.13
BEST1-208ENST00000534553 SART1O43290 800 aaKnown RBP14.25□□□□□ -0.13
BEST1-208ENST00000534553 ANK1P16157 1881 aa14.25□□□□□ -0.13
BEST1-208ENST00000534553 CD58P19256 250 aa14.25□□□□□ -0.13
BEST1-208ENST00000534553 DCAF12L1Q5VU92 463 aa14.25□□□□□ -0.13
BEST1-208ENST00000534553 C7orf31Q8N865 590 aa14.25□□□□□ -0.13
BEST1-208ENST00000534553 SMC1BQ8NDV3 1235 aa14.25□□□□□ -0.13
BEST1-208ENST00000534553 CXorf38Q8TB03 319 aa14.25□□□□□ -0.13
BEST1-208ENST00000534553 CAVIN3Q969G5 261 aa14.25□□□□□ -0.13
BEST1-208ENST00000534553 NXF1Q9UBU9 619 aaKnown RBP14.25□□□□□ -0.13
BEST1-208ENST00000534553 MTUS1Q9ULD2 1270 aa14.25□□□□□ -0.13
BEST1-208ENST00000534553 KIAA1257Q9ULG3 409 aa14.25□□□□□ -0.13
BEST1-208ENST00000534553 TMEM110-MUSTN1A8MSY1 372 aa14.25□□□□□ -0.13
BEST1-208ENST00000534553 XPOTO43592 962 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms