RNA–Protein interactions for RNA: ENST00000533961.1

RDX-215, Transcript of radixin, humanhuman

TSL 2

Gene RDX, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-215ENST00000533961 MED25Q71SY5 747 aa4.45□□□□□ -1.7
RDX-215ENST00000533961 C14orf80Q86SX3 495 aa4.45□□□□□ -1.7
RDX-215ENST00000533961 FMNL3Q8IVF7 1028 aa4.45□□□□□ -1.7
RDX-215ENST00000533961 COLGALT2Q8IYK4 626 aa4.45□□□□□ -1.7
RDX-215ENST00000533961 GRAMD1CQ8IYS0 662 aa4.45□□□□□ -1.7
RDX-215ENST00000533961 TMEM132CQ8N3T6 1108 aa4.45□□□□□ -1.7
RDX-215ENST00000533961 FITM2Q8N6M3 262 aa4.45□□□□□ -1.7
RDX-215ENST00000533961 OR56A1Q8NGH5 318 aa4.45□□□□□ -1.7
RDX-215ENST00000533961 PPP1R35Q8TAP8 253 aa4.45□□□□□ -1.7
RDX-215ENST00000533961 LRFN3Q9BTN0 628 aa4.45□□□□□ -1.7
RDX-215ENST00000533961 WDR11Q9BZH6 1224 aa4.45□□□□□ -1.7
RDX-215ENST00000533961 SLC13A1Q9BZW2 595 aa4.45□□□□□ -1.7
RDX-215ENST00000533961 GALNT9Q9HCQ5 603 aa4.45□□□□□ -1.7
RDX-215ENST00000533961 PCDHB1Q9Y5F3 818 aa4.45□□□□□ -1.7
RDX-215ENST00000533961 MAST3O60307 1309 aa4.45□□□□□ -1.7
RDX-215ENST00000533961 PNPLA7Q6ZV29 1317 aa4.45□□□□□ -1.7
RDX-215ENST00000533961 A0A1B0GTW7 788 aa4.44□□□□□ -1.7
RDX-215ENST00000533961 ERN1O75460 977 aaKnown RBP4.44□□□□□ -1.7
RDX-215ENST00000533961 ESRRBO95718 433 aa4.44□□□□□ -1.7
RDX-215ENST00000533961 CKBP12277 381 aa4.44□□□□□ -1.7
RDX-215ENST00000533961 HOXB6P17509 224 aaKnown RBP4.44□□□□□ -1.7
RDX-215ENST00000533961 TYRP1P17643 537 aa4.44□□□□□ -1.7
RDX-215ENST00000533961 CXCR5P32302 372 aa4.44□□□□□ -1.7
RDX-215ENST00000533961 ZNF280AP59817 542 aaPredicted RBP4.44□□□□□ -1.7
RDX-215ENST00000533961 CTXN1P60606 82 aa4.44□□□□□ -1.7
RDX-215ENST00000533961 CREMQ03060 361 aa4.44□□□□□ -1.7
RDX-215ENST00000533961 FOXF2Q12947 444 aa4.44□□□□□ -1.7
RDX-215ENST00000533961 RESTQ13127 1097 aa4.44□□□□□ -1.7
RDX-215ENST00000533961 MPP3Q13368 585 aa4.44□□□□□ -1.7
RDX-215ENST00000533961 MTM1Q13496 603 aa4.44□□□□□ -1.7
RDX-215ENST00000533961 UBE3BQ7Z3V4 1068 aa4.44□□□□□ -1.7
RDX-215ENST00000533961 SRRM1Q8IYB3 904 aaKnown RBP4.44□□□□□ -1.7
RDX-215ENST00000533961 CELF5Q8N6W0 485 aaKnown RBP4.44□□□□□ -1.7
RDX-215ENST00000533961 ZNF366Q8N895 744 aa4.44□□□□□ -1.7
RDX-215ENST00000533961 DCBLD1Q8N8Z6 715 aa4.44□□□□□ -1.7
RDX-215ENST00000533961 FAM98AQ8NCA5 519 aaKnown RBP4.44□□□□□ -1.7
RDX-215ENST00000533961 SIMC1Q8NDZ2 872 aa4.44□□□□□ -1.7
RDX-215ENST00000533961 ANKS1AQ92625 1134 aa4.44□□□□□ -1.7
RDX-215ENST00000533961 HDAC10Q969S8 669 aa4.44□□□□□ -1.7
RDX-215ENST00000533961 TMX3Q96JJ7 454 aa4.44□□□□□ -1.7
RDX-215ENST00000533961 PNKPQ96T60 521 aa4.44□□□□□ -1.7
RDX-215ENST00000533961 TEX101Q9BY14 249 aa4.44□□□□□ -1.7
RDX-215ENST00000533961 SLC29A3Q9BZD2 475 aa4.44□□□□□ -1.7
RDX-215ENST00000533961 TBCCD1Q9NVR7 557 aa4.44□□□□□ -1.7
RDX-215ENST00000533961 DMTF1Q9Y222 760 aa4.44□□□□□ -1.7
RDX-215ENST00000533961 EPN1Q9Y6I3 576 aaPredicted RBP4.44□□□□□ -1.7
RDX-215ENST00000533961 TCRBV7S2A1N4TA0A589 114 aa4.43□□□□□ -1.7
RDX-215ENST00000533961 AP1G1O43747 822 aa4.43□□□□□ -1.7
RDX-215ENST00000533961 LPXNO60711 386 aa4.43□□□□□ -1.7
RDX-215ENST00000533961 SBK3P0C264 359 aa4.43□□□□□ -1.7
RDX-215ENST00000533961 MTHFD1P11586 935 aaKnown RBP4.43□□□□□ -1.7
RDX-215ENST00000533961 DDCP20711 480 aa4.43□□□□□ -1.7
RDX-215ENST00000533961 FDXRP22570 491 aa4.43□□□□□ -1.7
RDX-215ENST00000533961 SLC6A2P23975 617 aa4.43□□□□□ -1.7
RDX-215ENST00000533961 PTH2RP49190 550 aa4.43□□□□□ -1.7
RDX-215ENST00000533961 SEC24CP53992 1094 aa4.43□□□□□ -1.7
RDX-215ENST00000533961 ATP8B2P98198 1209 aa4.43□□□□□ -1.7
RDX-215ENST00000533961 CDC42EP1Q00587 391 aa4.43□□□□□ -1.7
RDX-215ENST00000533961 RAB39AQ14964 217 aa4.43□□□□□ -1.7
RDX-215ENST00000533961 IFIT1BQ5T764 474 aaKnown RBP4.43□□□□□ -1.7
RDX-215ENST00000533961 TSHZ3Q63HK5 1081 aa4.43□□□□□ -1.7
RDX-215ENST00000533961 ZNF529Q6P280 563 aa4.43□□□□□ -1.7
RDX-215ENST00000533961 MIER2Q8N344 545 aa4.43□□□□□ -1.7
RDX-215ENST00000533961 SH2D3CQ8N5H7 860 aa4.43□□□□□ -1.7
RDX-215ENST00000533961 Q8N9P0 234 aaPredicted RBP4.43□□□□□ -1.7
RDX-215ENST00000533961 ADAM2Q99965 735 aa4.43□□□□□ -1.7
RDX-215ENST00000533961 VRK1Q99986 396 aaPredicted RBP4.43□□□□□ -1.7
RDX-215ENST00000533961 CDH19Q9H159 772 aa4.43□□□□□ -1.7
RDX-215ENST00000533961 MAN1C1Q9NR34 630 aa4.43□□□□□ -1.7
RDX-215ENST00000533961 CALCOCO1Q9P1Z2 691 aa4.43□□□□□ -1.7
RDX-215ENST00000533961 ANKFY1Q9P2R3 1169 aa4.43□□□□□ -1.7
RDX-215ENST00000533961 DDX20Q9UHI6 824 aaKnown RBP4.43□□□□□ -1.7
RDX-215ENST00000533961 COL3A1P02461 1466 aaPredicted RBP4.43□□□□□ -1.7
RDX-215ENST00000533961 CCDC78A2IDD5 438 aa4.42□□□□□ -1.7
RDX-215ENST00000533961 DNAJC9-AS1A6NH13 148 aa4.42□□□□□ -1.7
RDX-215ENST00000533961 TSPAN6O43657 245 aa4.42□□□□□ -1.7
RDX-215ENST00000533961 HAUS5O94927 633 aa4.42□□□□□ -1.7
RDX-215ENST00000533961 SPDEFO95238 335 aa4.42□□□□□ -1.7
RDX-215ENST00000533961 GPANK1O95872 356 aa4.42□□□□□ -1.7
RDX-215ENST00000533961 ANXA1P04083 346 aa4.42□□□□□ -1.7
RDX-215ENST00000533961 PDCP20941 246 aa4.42□□□□□ -1.7
RDX-215ENST00000533961 PHKA1P46020 1223 aa4.42□□□□□ -1.7
RDX-215ENST00000533961 EPHB1P54762 984 aa4.42□□□□□ -1.7
RDX-215ENST00000533961 DSC2Q02487 901 aa4.42□□□□□ -1.7
RDX-215ENST00000533961 NFE2Q16621 373 aaPredicted RBP4.42□□□□□ -1.7
RDX-215ENST00000533961 CHPFQ8IZ52 775 aa4.42□□□□□ -1.7
RDX-215ENST00000533961 AOPEPQ8N6M6 819 aa4.42□□□□□ -1.7
RDX-215ENST00000533961 CAGE1Q8TC20 777 aa4.42□□□□□ -1.7
RDX-215ENST00000533961 DMRTA2Q96SC8 542 aa4.42□□□□□ -1.7
RDX-215ENST00000533961 NEU1Q99519 415 aa4.42□□□□□ -1.7
RDX-215ENST00000533961 ALOXE3Q9BYJ1 711 aa4.42□□□□□ -1.7
RDX-215ENST00000533961 C11orf54Q9H0W9 315 aaPredicted RBP4.42□□□□□ -1.7
RDX-215ENST00000533961 SLC12A5Q9H2X9 1139 aa4.42□□□□□ -1.7
RDX-215ENST00000533961 ARMT1Q9H993 441 aa4.42□□□□□ -1.7
RDX-215ENST00000533961 TDP1Q9NUW8 608 aa4.42□□□□□ -1.7
RDX-215ENST00000533961 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.42□□□□□ -1.7
RDX-215ENST00000533961 STAP2Q9UGK3 403 aa4.42□□□□□ -1.7
RDX-215ENST00000533961 SLC23A1Q9UHI7 598 aa4.42□□□□□ -1.7
RDX-215ENST00000533961 PCDHA3Q9Y5H8 950 aa4.42□□□□□ -1.7
RDX-215ENST00000533961 ARHGEF17Q96PE2 2063 aaPredicted RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms