RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 CCZ1P86791 482 aaPredicted RBP11.77□□□□□ -0.53
CCDC90B-218ENST00000533761 PPP3CAQ08209 521 aa11.77□□□□□ -0.53
CCDC90B-218ENST00000533761 LRMPQ12912 555 aa11.77□□□□□ -0.53
CCDC90B-218ENST00000533761 TMEM240Q5SV17 173 aa11.77□□□□□ -0.53
CCDC90B-218ENST00000533761 CRELD2Q6UXH1 353 aaPredicted RBP11.77□□□□□ -0.53
CCDC90B-218ENST00000533761 RTN4RL1Q86UN2 441 aaPredicted RBP11.77□□□□□ -0.53
CCDC90B-218ENST00000533761 IRF7Q92985 503 aa11.77□□□□□ -0.53
CCDC90B-218ENST00000533761 ZNF830Q96NB3 372 aaPredicted RBP11.77□□□□□ -0.53
CCDC90B-218ENST00000533761 GDF15Q99988 308 aa11.77□□□□□ -0.53
CCDC90B-218ENST00000533761 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.77□□□□□ -0.53
CCDC90B-218ENST00000533761 UBE2OQ9C0C9 1292 aaKnown RBP11.77□□□□□ -0.53
CCDC90B-218ENST00000533761 TMEM117Q9H0C3 514 aa11.77□□□□□ -0.53
CCDC90B-218ENST00000533761 KCNF1Q9H3M0 494 aa11.77□□□□□ -0.53
CCDC90B-218ENST00000533761 DEF6Q9H4E7 631 aa11.77□□□□□ -0.53
CCDC90B-218ENST00000533761 PDE11AQ9HCR9 933 aa11.77□□□□□ -0.53
CCDC90B-218ENST00000533761 FAM105AQ9NUU6 356 aa11.77□□□□□ -0.53
CCDC90B-218ENST00000533761 RAB20Q9NX57 234 aa11.77□□□□□ -0.53
CCDC90B-218ENST00000533761 NXF1Q9UBU9 619 aaKnown RBP11.77□□□□□ -0.53
CCDC90B-218ENST00000533761 PCDHB2Q9Y5E7 798 aa11.77□□□□□ -0.53
CCDC90B-218ENST00000533761 C9IYK1 514 aa11.76□□□□□ -0.53
CCDC90B-218ENST00000533761 FAM189A1O60320 539 aa11.76□□□□□ -0.53
CCDC90B-218ENST00000533761 MGEA5O60502 916 aa11.76□□□□□ -0.53
CCDC90B-218ENST00000533761 ZNF623O75123 536 aa11.76□□□□□ -0.53
CCDC90B-218ENST00000533761 OFD1O75665 1012 aa11.76□□□□□ -0.53
CCDC90B-218ENST00000533761 EOMESO95936 686 aa11.76□□□□□ -0.53
CCDC90B-218ENST00000533761 AMHP03971 560 aa11.76□□□□□ -0.53
CCDC90B-218ENST00000533761 SLC9A1P19634 815 aa11.76□□□□□ -0.53
CCDC90B-218ENST00000533761 FECHP22830 423 aa11.76□□□□□ -0.53
CCDC90B-218ENST00000533761 ANXA13P27216 316 aa11.76□□□□□ -0.53
CCDC90B-218ENST00000533761 STAT1P42224 750 aa11.76□□□□□ -0.53
CCDC90B-218ENST00000533761 KLK7P49862 253 aa11.76□□□□□ -0.53
CCDC90B-218ENST00000533761 MFAP3P55082 362 aa11.76□□□□□ -0.53
CCDC90B-218ENST00000533761 TRPC3Q13507 836 aa11.76□□□□□ -0.53
CCDC90B-218ENST00000533761 RAPGEF1Q13905 1077 aa11.76□□□□□ -0.53
CCDC90B-218ENST00000533761 MEA1Q16626 185 aa11.76□□□□□ -0.53
CCDC90B-218ENST00000533761 ZACNQ401N2 412 aa11.76□□□□□ -0.53
CCDC90B-218ENST00000533761 EPC2Q52LR7 807 aa11.76□□□□□ -0.53
CCDC90B-218ENST00000533761 SV2AQ7L0J3 742 aa11.76□□□□□ -0.53
CCDC90B-218ENST00000533761 CDR2LQ86X02 465 aaPredicted RBP11.76□□□□□ -0.53
CCDC90B-218ENST00000533761 SNIP1Q8TAD8 396 aaKnown RBP11.76□□□□□ -0.53
CCDC90B-218ENST00000533761 HERVK_113Q902F9 699 aa11.76□□□□□ -0.53
CCDC90B-218ENST00000533761 JAKMIP2Q96AA8 810 aa11.76□□□□□ -0.53
CCDC90B-218ENST00000533761 CCDC42Q96M95 316 aa11.76□□□□□ -0.53
CCDC90B-218ENST00000533761 STK33Q9BYT3 514 aa11.76□□□□□ -0.53
CCDC90B-218ENST00000533761 HAPLN2Q9GZV7 340 aa11.76□□□□□ -0.53
CCDC90B-218ENST00000533761 DERAQ9Y315 318 aa11.76□□□□□ -0.53
CCDC90B-218ENST00000533761 FCF1Q9Y324 198 aaKnown RBP11.76□□□□□ -0.53
CCDC90B-218ENST00000533761 C2CD2Q9Y426 696 aa11.76□□□□□ -0.53
CCDC90B-218ENST00000533761 ARIH1Q9Y4X5 557 aaPredicted RBP11.76□□□□□ -0.53
CCDC90B-218ENST00000533761 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.75□□□□□ -0.53
CCDC90B-218ENST00000533761 LRRC53A6NM62 1247 aa11.75□□□□□ -0.53
CCDC90B-218ENST00000533761 ZBBXA8MT70 800 aa11.75□□□□□ -0.53
CCDC90B-218ENST00000533761 SERPING1P05155 500 aa11.75□□□□□ -0.53
CCDC90B-218ENST00000533761 CCDC175P0C221 793 aa11.75□□□□□ -0.53
CCDC90B-218ENST00000533761 FERP16591 822 aa11.75□□□□□ -0.53
CCDC90B-218ENST00000533761 TBXAS1P24557 533 aaPredicted RBP11.75□□□□□ -0.53
CCDC90B-218ENST00000533761 BMP8BP34820 402 aa11.75□□□□□ -0.53
CCDC90B-218ENST00000533761 KRT83P78385 493 aa11.75□□□□□ -0.53
CCDC90B-218ENST00000533761 FAM189BP81408 668 aa11.75□□□□□ -0.53
CCDC90B-218ENST00000533761 GCNT1Q02742 428 aa11.75□□□□□ -0.53
CCDC90B-218ENST00000533761 ENOX2Q16206 610 aaKnown RBP11.75□□□□□ -0.53
CCDC90B-218ENST00000533761 ASIC2Q16515 512 aa11.75□□□□□ -0.53
CCDC90B-218ENST00000533761 TCTN1Q2MV58 587 aa11.75□□□□□ -0.53
CCDC90B-218ENST00000533761 UBXN11Q5T124 520 aa11.75□□□□□ -0.53
CCDC90B-218ENST00000533761 EEF1DP3Q658K8 133 aa11.75□□□□□ -0.53
CCDC90B-218ENST00000533761 PDXDC1Q6P996 788 aa11.75□□□□□ -0.53
CCDC90B-218ENST00000533761 ZSWIM2Q8NEG5 633 aa11.75□□□□□ -0.53
CCDC90B-218ENST00000533761 KIAA1524Q8TCG1 905 aa11.75□□□□□ -0.53
CCDC90B-218ENST00000533761 TAF4BQ92750 862 aa11.75□□□□□ -0.53
CCDC90B-218ENST00000533761 PGBD4Q96DM1 585 aa11.75□□□□□ -0.53
CCDC90B-218ENST00000533761 FAXDC2Q96IV6 333 aa11.75□□□□□ -0.53
CCDC90B-218ENST00000533761 GANQ9H2C0 597 aa11.75□□□□□ -0.53
CCDC90B-218ENST00000533761 ELAC1Q9H777 363 aaKnown RBP11.75□□□□□ -0.53
CCDC90B-218ENST00000533761 NLRC4Q9NPP4 1024 aa11.75□□□□□ -0.53
CCDC90B-218ENST00000533761 PCDHB7Q9Y5E2 793 aa11.75□□□□□ -0.53
CCDC90B-218ENST00000533761 SLC4A7Q9Y6M7 1214 aa11.75□□□□□ -0.53
CCDC90B-218ENST00000533761 NPTXRO95502 500 aa11.75□□□□□ -0.53
CCDC90B-218ENST00000533761 CXCL8P10145 99 aa11.75□□□□□ -0.53
CCDC90B-218ENST00000533761 P4HA1P13674 534 aa11.75□□□□□ -0.53
CCDC90B-218ENST00000533761 TNFSF9P41273 254 aa11.75□□□□□ -0.53
CCDC90B-218ENST00000533761 OSTNP61366 133 aa11.75□□□□□ -0.53
CCDC90B-218ENST00000533761 WDR5P61964 334 aaKnown RBP11.75□□□□□ -0.53
CCDC90B-218ENST00000533761 TFAMQ00059 246 aaKnown RBP11.75□□□□□ -0.53
CCDC90B-218ENST00000533761 TMEM132DQ14C87 1099 aa11.75□□□□□ -0.53
CCDC90B-218ENST00000533761 SPA17Q15506 151 aa11.75□□□□□ -0.53
CCDC90B-218ENST00000533761 SGSM1Q2NKQ1 1148 aa11.75□□□□□ -0.53
CCDC90B-218ENST00000533761 TDRD12Q587J7 1177 aaKnown RBP11.75□□□□□ -0.53
CCDC90B-218ENST00000533761 C15orf39Q6ZRI6 1047 aa11.75□□□□□ -0.53
CCDC90B-218ENST00000533761 ECHDC2Q86YB7 292 aa11.75□□□□□ -0.53
CCDC90B-218ENST00000533761 PPM1KQ8N3J5 372 aa11.75□□□□□ -0.53
CCDC90B-218ENST00000533761 PHOSPHO2Q8TCD6 241 aa11.75□□□□□ -0.53
CCDC90B-218ENST00000533761 LINC01599Q8WXQ3 324 aa11.75□□□□□ -0.53
CCDC90B-218ENST00000533761 BAP1Q92560 729 aa11.75□□□□□ -0.53
CCDC90B-218ENST00000533761 EIF2AQ9BY44 585 aaKnown RBP11.75□□□□□ -0.53
CCDC90B-218ENST00000533761 UBN1Q9NPG3 1134 aa11.75□□□□□ -0.53
CCDC90B-218ENST00000533761 TMEM161AQ9NX61 479 aa11.75□□□□□ -0.53
CCDC90B-218ENST00000533761 AIPL1Q9NZN9 384 aa11.75□□□□□ -0.53
CCDC90B-218ENST00000533761 DNAJC12Q9UKB3 198 aa11.75□□□□□ -0.53
CCDC90B-218ENST00000533761 LRFN2Q9ULH4 789 aa11.75□□□□□ -0.53
CCDC90B-218ENST00000533761 IPPQ9Y573 584 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms