RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 TRPV6Q9H1D0 765 aa8.52□□□□□ -1.05
CASP4-212ENST00000533730 HIPK3Q9H422 1215 aa8.52□□□□□ -1.05
CASP4-212ENST00000533730 ZSCAN16Q9H4T2 348 aaPredicted RBP8.52□□□□□ -1.05
CASP4-212ENST00000533730 TRMT13Q9NUP7 481 aaKnown RBP8.52□□□□□ -1.05
CASP4-212ENST00000533730 VAV3Q9UKW4 847 aa8.52□□□□□ -1.05
CASP4-212ENST00000533730 ZMYND8Q9ULU4 1186 aaPredicted RBP8.52□□□□□ -1.05
CASP4-212ENST00000533730 CEP131Q9UPN4 1083 aa8.52□□□□□ -1.05
CASP4-212ENST00000533730 IGSF9BQ9UPX0 1349 aa8.52□□□□□ -1.05
CASP4-212ENST00000533730 TRIM43BA6NCK2 446 aa8.51□□□□□ -1.05
CASP4-212ENST00000533730 F8W735 103 aaPredicted RBP8.51□□□□□ -1.05
CASP4-212ENST00000533730 STX6O43752 255 aa8.51□□□□□ -1.05
CASP4-212ENST00000533730 CAND2O75155 1236 aa8.51□□□□□ -1.05
CASP4-212ENST00000533730 ITGAVP06756 1048 aa8.51□□□□□ -1.05
CASP4-212ENST00000533730 SYN1P17600 705 aa8.51□□□□□ -1.05
CASP4-212ENST00000533730 MARK3P27448 753 aa8.51□□□□□ -1.05
CASP4-212ENST00000533730 PRPHP41219 470 aa8.51□□□□□ -1.05
CASP4-212ENST00000533730 PMS1P54277 932 aaKnown RBP8.51□□□□□ -1.05
CASP4-212ENST00000533730 PSMC5P62195 406 aa8.51□□□□□ -1.05
CASP4-212ENST00000533730 ETF1P62495 437 aaKnown RBP8.51□□□□□ -1.05
CASP4-212ENST00000533730 STRN3Q13033 797 aa8.51□□□□□ -1.05
CASP4-212ENST00000533730 PLCB4Q15147 1175 aa8.51□□□□□ -1.05
CASP4-212ENST00000533730 EPHA7Q15375 998 aa8.51□□□□□ -1.05
CASP4-212ENST00000533730 ZNF174Q15697 407 aa8.51□□□□□ -1.05
CASP4-212ENST00000533730 ZNF484Q5JVG2 852 aa8.51□□□□□ -1.05
CASP4-212ENST00000533730 MFSD5Q6N075 450 aa8.51□□□□□ -1.05
CASP4-212ENST00000533730 LHFPL2Q6ZUX7 228 aa8.51□□□□□ -1.05
CASP4-212ENST00000533730 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.51□□□□□ -1.05
CASP4-212ENST00000533730 RSPH3Q86UC2 560 aa8.51□□□□□ -1.05
CASP4-212ENST00000533730 SERINC5Q86VE9 423 aa8.51□□□□□ -1.05
CASP4-212ENST00000533730 ERMNQ8TAM6 284 aa8.51□□□□□ -1.05
CASP4-212ENST00000533730 LMBR1Q8WVP7 490 aa8.51□□□□□ -1.05
CASP4-212ENST00000533730 TRIM43Q96BQ3 446 aaPredicted RBP8.51□□□□□ -1.05
CASP4-212ENST00000533730 UIMC1Q96RL1 719 aa8.51□□□□□ -1.05
CASP4-212ENST00000533730 SMAD5Q99717 465 aaKnown RBP8.51□□□□□ -1.05
CASP4-212ENST00000533730 SPOCK3Q9BQ16 436 aa8.51□□□□□ -1.05
CASP4-212ENST00000533730 RAB34Q9BZG1 259 aa8.51□□□□□ -1.05
CASP4-212ENST00000533730 RNPEPQ9H4A4 650 aa8.51□□□□□ -1.05
CASP4-212ENST00000533730 TTC12Q9H892 705 aaPredicted RBP8.51□□□□□ -1.05
CASP4-212ENST00000533730 NRBP2Q9NSY0 501 aa8.51□□□□□ -1.05
CASP4-212ENST00000533730 APEX2Q9UBZ4 518 aa8.51□□□□□ -1.05
CASP4-212ENST00000533730 SFMBT1Q9UHJ3 866 aa8.51□□□□□ -1.05
CASP4-212ENST00000533730 TUBE1Q9UJT0 475 aa8.51□□□□□ -1.05
CASP4-212ENST00000533730 TELO2Q9Y4R8 837 aa8.51□□□□□ -1.05
CASP4-212ENST00000533730 PDE4DIPQ5VU43 2346 aa8.51□□□□□ -1.05
CASP4-212ENST00000533730 A0A1W2PPC1 479 aa8.5□□□□□ -1.05
CASP4-212ENST00000533730 MBLAC1A4D2B0 266 aaPredicted RBP8.5□□□□□ -1.05
CASP4-212ENST00000533730 C9IYK1 514 aa8.5□□□□□ -1.05
CASP4-212ENST00000533730 PRODHO43272 600 aa8.5□□□□□ -1.05
CASP4-212ENST00000533730 PFKMP08237 780 aa8.5□□□□□ -1.05
CASP4-212ENST00000533730 CYP2C9P11712 490 aa8.5□□□□□ -1.05
CASP4-212ENST00000533730 INSRRP14616 1297 aa8.5□□□□□ -1.05
CASP4-212ENST00000533730 CPEP16870 476 aa8.5□□□□□ -1.05
CASP4-212ENST00000533730 NOS3P29474 1203 aa8.5□□□□□ -1.05
CASP4-212ENST00000533730 BMP8BP34820 402 aa8.5□□□□□ -1.05
CASP4-212ENST00000533730 RFC2P35250 354 aa8.5□□□□□ -1.05
CASP4-212ENST00000533730 GRIA2P42262 883 aa8.5□□□□□ -1.05
CASP4-212ENST00000533730 TXKP42681 527 aa8.5□□□□□ -1.05
CASP4-212ENST00000533730 MAGEA10P43363 369 aaPredicted RBP8.5□□□□□ -1.05
CASP4-212ENST00000533730 QARSP47897 775 aaKnown RBP8.5□□□□□ -1.05
CASP4-212ENST00000533730 TOB1P50616 345 aaPredicted RBP8.5□□□□□ -1.05
CASP4-212ENST00000533730 RAB27AP51159 221 aa8.5□□□□□ -1.05
CASP4-212ENST00000533730 SUMO1P63165 101 aaKnown RBP8.5□□□□□ -1.05
CASP4-212ENST00000533730 ADAM17P78536 824 aa8.5□□□□□ -1.05
CASP4-212ENST00000533730 PRKCEQ02156 737 aa8.5□□□□□ -1.05
CASP4-212ENST00000533730 FPGSQ05932 587 aa8.5□□□□□ -1.05
CASP4-212ENST00000533730 SPIRE1Q08AE8 756 aa8.5□□□□□ -1.05
CASP4-212ENST00000533730 PPIGQ13427 754 aaKnown RBP eCLIP8.5□□□□□ -1.05
CASP4-212ENST00000533730 BIRC2Q13490 618 aa8.5□□□□□ -1.05
CASP4-212ENST00000533730 MAP7Q14244 749 aa8.5□□□□□ -1.05
CASP4-212ENST00000533730 PDIA5Q14554 519 aa8.5□□□□□ -1.05
CASP4-212ENST00000533730 XKR3Q5GH77 459 aa8.5□□□□□ -1.05
CASP4-212ENST00000533730 NCAPH2Q6IBW4 605 aa8.5□□□□□ -1.05
CASP4-212ENST00000533730 RPAINQ86UA6 219 aa8.5□□□□□ -1.05
CASP4-212ENST00000533730 ZNF227Q86WZ6 799 aa8.5□□□□□ -1.05
CASP4-212ENST00000533730 PHACTR4Q8IZ21 702 aa8.5□□□□□ -1.05
CASP4-212ENST00000533730 PPM1KQ8N3J5 372 aa8.5□□□□□ -1.05
CASP4-212ENST00000533730 LRRN4CLQ8ND94 238 aa8.5□□□□□ -1.05
CASP4-212ENST00000533730 UBASH3BQ8TF42 649 aa8.5□□□□□ -1.05
CASP4-212ENST00000533730 WFDC12Q8WWY7 111 aa8.5□□□□□ -1.05
CASP4-212ENST00000533730 GJA10Q969M2 543 aa8.5□□□□□ -1.05
CASP4-212ENST00000533730 DHRS1Q96LJ7 313 aa8.5□□□□□ -1.05
CASP4-212ENST00000533730 RPS6KC1Q96S38 1066 aa8.5□□□□□ -1.05
CASP4-212ENST00000533730 GDF15Q99988 308 aa8.5□□□□□ -1.05
CASP4-212ENST00000533730 WNT10AQ9GZT5 417 aa8.5□□□□□ -1.05
CASP4-212ENST00000533730 SETD4Q9NVD3 440 aa8.5□□□□□ -1.05
CASP4-212ENST00000533730 SUCOQ9UBS9 1254 aaKnown RBP8.5□□□□□ -1.05
CASP4-212ENST00000533730 TJP2Q9UDY2 1190 aa8.5□□□□□ -1.05
CASP4-212ENST00000533730 HIF3AQ9Y2N7 669 aa8.5□□□□□ -1.05
CASP4-212ENST00000533730 PCDHB6Q9Y5E3 794 aa8.5□□□□□ -1.05
CASP4-212ENST00000533730 MAGEB2O15479 319 aa8.49□□□□□ -1.05
CASP4-212ENST00000533730 PABPC1P11940 636 aaKnown RBP8.49□□□□□ -1.05
CASP4-212ENST00000533730 MUTP22033 750 aa8.49□□□□□ -1.05
CASP4-212ENST00000533730 NEK2P51955 445 aa8.49□□□□□ -1.05
CASP4-212ENST00000533730 NLRP12P59046 1061 aa8.49□□□□□ -1.05
CASP4-212ENST00000533730 ATP2C1P98194 919 aaPredicted RBP8.49□□□□□ -1.05
CASP4-212ENST00000533730 RESTQ13127 1097 aa8.49□□□□□ -1.05
CASP4-212ENST00000533730 ZC3H12AQ5D1E8 599 aaKnown RBP8.49□□□□□ -1.05
CASP4-212ENST00000533730 ARL6IP4Q66PJ3 421 aaKnown RBP8.49□□□□□ -1.05
CASP4-212ENST00000533730 HAUS3Q68CZ6 603 aa8.49□□□□□ -1.05
CASP4-212ENST00000533730 HEATR6Q6AI08 1181 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms