RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 TATDN1Q6P1N9 297 aa11.87□□□□□ -0.51
AMBRA1-211ENST00000533727 BTNL9Q6UXG8 535 aa11.87□□□□□ -0.51
AMBRA1-211ENST00000533727 SPDYE1Q8NFV5 336 aaPredicted RBP11.87□□□□□ -0.51
AMBRA1-211ENST00000533727 TSSK1BQ9BXA7 367 aa11.87□□□□□ -0.51
AMBRA1-211ENST00000533727 BFARQ9NZS9 450 aa11.87□□□□□ -0.51
AMBRA1-211ENST00000533727 ZNF286BP0CG31 522 aa11.87□□□□□ -0.51
AMBRA1-211ENST00000533727 SNX1Q13596 522 aa11.87□□□□□ -0.51
AMBRA1-211ENST00000533727 PIGHQ14442 188 aaPredicted RBP11.87□□□□□ -0.51
AMBRA1-211ENST00000533727 LY6KQ17RY6 165 aa11.87□□□□□ -0.51
AMBRA1-211ENST00000533727 ZPBP2Q6X784 338 aa11.87□□□□□ -0.51
AMBRA1-211ENST00000533727 CGRRF1Q99675 332 aa11.87□□□□□ -0.51
AMBRA1-211ENST00000533727 SENP6Q9GZR1 1112 aaPredicted RBP11.87□□□□□ -0.51
AMBRA1-211ENST00000533727 CYP39A1Q9NYL5 469 aa11.87□□□□□ -0.51
AMBRA1-211ENST00000533727 PIK3CDO00329 1044 aa11.87□□□□□ -0.51
AMBRA1-211ENST00000533727 FBXO21O94952 628 aa11.87□□□□□ -0.51
AMBRA1-211ENST00000533727 GRK4P32298 578 aa11.87□□□□□ -0.51
AMBRA1-211ENST00000533727 NPTX2P47972 431 aa11.87□□□□□ -0.51
AMBRA1-211ENST00000533727 GYS2P54840 703 aa11.87□□□□□ -0.51
AMBRA1-211ENST00000533727 LAMTOR4Q0VGL1 99 aa11.87□□□□□ -0.51
AMBRA1-211ENST00000533727 USP38Q8NB14 1042 aa11.87□□□□□ -0.51
AMBRA1-211ENST00000533727 EPB41L5Q9HCM4 733 aa11.87□□□□□ -0.51
AMBRA1-211ENST00000533727 AGPAT3Q9NRZ7 376 aa11.87□□□□□ -0.51
AMBRA1-211ENST00000533727 TXLNGQ9NUQ3 528 aa11.87□□□□□ -0.51
AMBRA1-211ENST00000533727 LMO7Q8WWI1 1683 aa11.87□□□□□ -0.51
AMBRA1-211ENST00000533727 TBKBP1A7MCY6 615 aa11.86□□□□□ -0.51
AMBRA1-211ENST00000533727 MTSS1O43312 755 aa11.86□□□□□ -0.51
AMBRA1-211ENST00000533727 GPC4O75487 556 aa11.86□□□□□ -0.51
AMBRA1-211ENST00000533727 PDGFRBP09619 1106 aa11.86□□□□□ -0.51
AMBRA1-211ENST00000533727 PRKAR2AP13861 404 aaKnown RBP11.86□□□□□ -0.51
AMBRA1-211ENST00000533727 DR1Q01658 176 aa11.86□□□□□ -0.51
AMBRA1-211ENST00000533727 GTF2H3Q13889 308 aa11.86□□□□□ -0.51
AMBRA1-211ENST00000533727 CELF3Q5SZQ8 465 aaKnown RBP11.86□□□□□ -0.51
AMBRA1-211ENST00000533727 VSIG10LQ86VR7 867 aa11.86□□□□□ -0.51
AMBRA1-211ENST00000533727 METTL16Q86W50 562 aaKnown RBP11.86□□□□□ -0.51
AMBRA1-211ENST00000533727 ZFPM1Q8IX07 1006 aa11.86□□□□□ -0.51
AMBRA1-211ENST00000533727 TAB3Q8N5C8 712 aaPredicted RBP11.86□□□□□ -0.51
AMBRA1-211ENST00000533727 PDCD7Q8N8D1 485 aaKnown RBP11.86□□□□□ -0.51
AMBRA1-211ENST00000533727 PDCD6IPQ8WUM4 868 aaKnown RBP11.86□□□□□ -0.51
AMBRA1-211ENST00000533727 USP13Q92995 863 aaPredicted RBP11.86□□□□□ -0.51
AMBRA1-211ENST00000533727 ASB7Q9H672 318 aa11.86□□□□□ -0.51
AMBRA1-211ENST00000533727 ITGA11Q9UKX5 1188 aa11.86□□□□□ -0.51
AMBRA1-211ENST00000533727 SALL3Q9BXA9 1300 aa11.86□□□□□ -0.51
AMBRA1-211ENST00000533727 APOL1O14791 398 aa11.86□□□□□ -0.51
AMBRA1-211ENST00000533727 CHEK2O96017 543 aa11.86□□□□□ -0.51
AMBRA1-211ENST00000533727 F9P00740 461 aa11.86□□□□□ -0.51
AMBRA1-211ENST00000533727 LGALS2P05162 132 aa11.86□□□□□ -0.51
AMBRA1-211ENST00000533727 DEUP1Q05D60 604 aa11.86□□□□□ -0.51
AMBRA1-211ENST00000533727 FAM133BQ5BKY9 247 aaKnown RBP11.86□□□□□ -0.51
AMBRA1-211ENST00000533727 CLEC17AQ6ZS10 378 aa11.86□□□□□ -0.51
AMBRA1-211ENST00000533727 WDR49Q8IV35 697 aa11.86□□□□□ -0.51
AMBRA1-211ENST00000533727 AGXT2Q9BYV1 514 aa11.86□□□□□ -0.51
AMBRA1-211ENST00000533727 UMODL1Q5DID0 1318 aa11.86□□□□□ -0.51
AMBRA1-211ENST00000533727 A0A087WZ62 844 aa11.86□□□□□ -0.51
AMBRA1-211ENST00000533727 CFAP69A5D8W1 941 aa11.86□□□□□ -0.51
AMBRA1-211ENST00000533727 ITGB3P05106 788 aa11.86□□□□□ -0.51
AMBRA1-211ENST00000533727 HSPA8P11142 646 aaKnown RBP11.86□□□□□ -0.51
AMBRA1-211ENST00000533727 ATP1A3P13637 1013 aa11.86□□□□□ -0.51
AMBRA1-211ENST00000533727 PDGFRAP16234 1089 aa11.86□□□□□ -0.51
AMBRA1-211ENST00000533727 TAC1P20366 129 aa11.86□□□□□ -0.51
AMBRA1-211ENST00000533727 ADCYAP1R1P41586 468 aa11.86□□□□□ -0.51
AMBRA1-211ENST00000533727 ESRRGP62508 458 aa11.86□□□□□ -0.51
AMBRA1-211ENST00000533727 NALCNQ8IZF0 1738 aa11.86□□□□□ -0.51
AMBRA1-211ENST00000533727 ARMC2Q8NEN0 867 aa11.86□□□□□ -0.51
AMBRA1-211ENST00000533727 CXorf38Q8TB03 319 aa11.86□□□□□ -0.51
AMBRA1-211ENST00000533727 OSMRQ99650 979 aa11.86□□□□□ -0.51
AMBRA1-211ENST00000533727 FDXACB1Q9BRP7 624 aaPredicted RBP11.86□□□□□ -0.51
AMBRA1-211ENST00000533727 NAGPAQ9UK23 515 aa11.86□□□□□ -0.51
AMBRA1-211ENST00000533727 VTNP04004 478 aa11.86□□□□□ -0.51
AMBRA1-211ENST00000533727 ETFBP38117 255 aa11.86□□□□□ -0.51
AMBRA1-211ENST00000533727 TMED1Q13445 227 aa11.86□□□□□ -0.51
AMBRA1-211ENST00000533727 GLE1Q53GS7 698 aaKnown RBP11.86□□□□□ -0.51
AMBRA1-211ENST00000533727 PDLIM2Q96JY6 352 aa11.86□□□□□ -0.51
AMBRA1-211ENST00000533727 PI4K2BG5E9Z4 385 aa11.85□□□□□ -0.51
AMBRA1-211ENST00000533727 CYP26A1O43174 497 aa11.85□□□□□ -0.51
AMBRA1-211ENST00000533727 VDRP11473 427 aa11.85□□□□□ -0.51
AMBRA1-211ENST00000533727 CDH6P55285 790 aa11.85□□□□□ -0.51
AMBRA1-211ENST00000533727 ROR1Q01973 937 aa11.85□□□□□ -0.51
AMBRA1-211ENST00000533727 PAN2Q504Q3 1202 aaKnown RBP11.85□□□□□ -0.51
AMBRA1-211ENST00000533727 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.85□□□□□ -0.51
AMBRA1-211ENST00000533727 DNAJB3Q8WWF6 145 aa11.85□□□□□ -0.51
AMBRA1-211ENST00000533727 TRIM54Q9BYV2 358 aa11.85□□□□□ -0.51
AMBRA1-211ENST00000533727 THG1LQ9NWX6 298 aaKnown RBP11.85□□□□□ -0.51
AMBRA1-211ENST00000533727 ABI2Q9NYB9 513 aaPredicted RBP11.85□□□□□ -0.51
AMBRA1-211ENST00000533727 PCSK1NQ9UHG2 260 aa11.85□□□□□ -0.51
AMBRA1-211ENST00000533727 CAPN11Q9UMQ6 739 aa11.85□□□□□ -0.51
AMBRA1-211ENST00000533727 HEY1Q9Y5J3 304 aa11.85□□□□□ -0.51
AMBRA1-211ENST00000533727 IQANK1A0A1B0GTG1 560 aa11.85□□□□□ -0.51
AMBRA1-211ENST00000533727 SSU72P8A0A1W2PR75 194 aa11.85□□□□□ -0.51
AMBRA1-211ENST00000533727 CUL1Q13616 776 aa11.85□□□□□ -0.51
AMBRA1-211ENST00000533727 BBS9Q3SYG4 887 aa11.85□□□□□ -0.51
AMBRA1-211ENST00000533727 ACRBPQ8NEB7 543 aa11.85□□□□□ -0.51
AMBRA1-211ENST00000533727 KRT35Q92764 455 aa11.85□□□□□ -0.51
AMBRA1-211ENST00000533727 UROC1Q96N76 676 aa11.85□□□□□ -0.51
AMBRA1-211ENST00000533727 SOWAHDA6NJG2 315 aa11.85□□□□□ -0.51
AMBRA1-211ENST00000533727 HMGB1P1B2RPK0 211 aaPredicted RBP11.85□□□□□ -0.51
AMBRA1-211ENST00000533727 CYB561D2O14569 222 aa11.85□□□□□ -0.51
AMBRA1-211ENST00000533727 FOXP2O15409 715 aa11.85□□□□□ -0.51
AMBRA1-211ENST00000533727 KDM1AO60341 852 aa11.85□□□□□ -0.51
AMBRA1-211ENST00000533727 MED24O75448 989 aa11.85□□□□□ -0.51
AMBRA1-211ENST00000533727 CTDNEP1O95476 244 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms