RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 ARHGAP29Q52LW3 1261 aa8.57□□□□□ -1.04
NXF1-215ENST00000533440 BMP2KLQ5H9B9 411 aa8.57□□□□□ -1.04
NXF1-215ENST00000533440 EARS2Q5JPH6 523 aaKnown RBP8.57□□□□□ -1.04
NXF1-215ENST00000533440 TCEAL6Q6IPX3 200 aa8.57□□□□□ -1.04
NXF1-215ENST00000533440 PKN3Q6P5Z2 889 aa8.57□□□□□ -1.04
NXF1-215ENST00000533440 ALKAL1Q6UXT8 129 aa8.57□□□□□ -1.04
NXF1-215ENST00000533440 MAEAQ7L5Y9 396 aa8.57□□□□□ -1.04
NXF1-215ENST00000533440 TMC8Q8IU68 726 aa8.57□□□□□ -1.04
NXF1-215ENST00000533440 BEST2Q8NFU1 509 aa8.57□□□□□ -1.04
NXF1-215ENST00000533440 FAM200AQ8TCP9 573 aa8.57□□□□□ -1.04
NXF1-215ENST00000533440 BSNDQ8WZ55 320 aa8.57□□□□□ -1.04
NXF1-215ENST00000533440 TCEAL3Q969E4 200 aa8.57□□□□□ -1.04
NXF1-215ENST00000533440 CCDC43Q96MW1 224 aaKnown RBP8.57□□□□□ -1.04
NXF1-215ENST00000533440 MKNK1Q9BUB5 465 aa8.57□□□□□ -1.04
NXF1-215ENST00000533440 EDEM2Q9BV94 578 aa8.57□□□□□ -1.04
NXF1-215ENST00000533440 DUSP15Q9H1R2 295 aaPredicted RBP8.57□□□□□ -1.04
NXF1-215ENST00000533440 SLITRK6Q9H5Y7 841 aa8.57□□□□□ -1.04
NXF1-215ENST00000533440 RTN4Q9NQC3 1192 aaKnown RBP8.57□□□□□ -1.04
NXF1-215ENST00000533440 OBP2AQ9NY56 170 aa8.57□□□□□ -1.04
NXF1-215ENST00000533440 GTSE1Q9NYZ3 720 aa8.57□□□□□ -1.04
NXF1-215ENST00000533440 PCDHA12Q9UN75 941 aa8.57□□□□□ -1.04
NXF1-215ENST00000533440 EML5Q05BV3 1969 aa8.57□□□□□ -1.04
NXF1-215ENST00000533440 LOC400499M0QZD8 3231 aa8.56□□□□□ -1.04
NXF1-215ENST00000533440 FREM2Q5SZK8 3169 aa8.56□□□□□ -1.04
NXF1-215ENST00000533440 A0A087WWV3 80 aa8.56□□□□□ -1.04
NXF1-215ENST00000533440 A0A1W2PRU2 124 aa8.56□□□□□ -1.04
NXF1-215ENST00000533440 C4orf47A7E2U8 309 aa8.56□□□□□ -1.04
NXF1-215ENST00000533440 PODXLO00592 558 aa8.56□□□□□ -1.04
NXF1-215ENST00000533440 TOP3BO95985 862 aaKnown RBP8.56□□□□□ -1.04
NXF1-215ENST00000533440 CEACAM1P13688 526 aa8.56□□□□□ -1.04
NXF1-215ENST00000533440 WEE1P30291 646 aa8.56□□□□□ -1.04
NXF1-215ENST00000533440 NAMPTP43490 491 aa8.56□□□□□ -1.04
NXF1-215ENST00000533440 RING1Q06587 406 aa8.56□□□□□ -1.04
NXF1-215ENST00000533440 TOB2Q14106 344 aaPredicted RBP8.56□□□□□ -1.04
NXF1-215ENST00000533440 GSE1Q14687 1217 aa8.56□□□□□ -1.04
NXF1-215ENST00000533440 TMEM132AQ24JP5 1023 aa8.56□□□□□ -1.04
NXF1-215ENST00000533440 CTXN3Q4LDR2 81 aa8.56□□□□□ -1.04
NXF1-215ENST00000533440 STXBP5Q5T5C0 1151 aa8.56□□□□□ -1.04
NXF1-215ENST00000533440 NT5DC1Q5TFE4 455 aa8.56□□□□□ -1.04
NXF1-215ENST00000533440 ZNF280DQ6N043 979 aa8.56□□□□□ -1.04
NXF1-215ENST00000533440 RNF19BQ6ZMZ0 732 aa8.56□□□□□ -1.04
NXF1-215ENST00000533440 PIK3AP1Q6ZUJ8 805 aa8.56□□□□□ -1.04
NXF1-215ENST00000533440 ARID3BQ8IVW6 561 aaPredicted RBP8.56□□□□□ -1.04
NXF1-215ENST00000533440 CAMKK1Q8N5S9 505 aa8.56□□□□□ -1.04
NXF1-215ENST00000533440 TTC8Q8TAM2 541 aa8.56□□□□□ -1.04
NXF1-215ENST00000533440 OXER1Q8TDS5 423 aa8.56□□□□□ -1.04
NXF1-215ENST00000533440 ZNF274Q96GC6 653 aaPredicted RBP8.56□□□□□ -1.04
NXF1-215ENST00000533440 ZFYVE19Q96K21 471 aa8.56□□□□□ -1.04
NXF1-215ENST00000533440 SUSD3Q96L08 255 aa8.56□□□□□ -1.04
NXF1-215ENST00000533440 ZMAT2Q96NC0 199 aaKnown RBP8.56□□□□□ -1.04
NXF1-215ENST00000533440 SCNM1Q9BWG6 230 aa8.56□□□□□ -1.04
NXF1-215ENST00000533440 DNAJC25Q9H1X3 360 aa8.56□□□□□ -1.04
NXF1-215ENST00000533440 YIPF1Q9Y548 306 aa8.56□□□□□ -1.04
NXF1-215ENST00000533440 LNP1A1A4G5 178 aa8.55□□□□□ -1.04
NXF1-215ENST00000533440 BCLAF3A2AJT9 711 aaKnown RBP8.55□□□□□ -1.04
NXF1-215ENST00000533440 TAF4O00268 1085 aa8.55□□□□□ -1.04
NXF1-215ENST00000533440 CPLX1O14810 134 aa8.55□□□□□ -1.04
NXF1-215ENST00000533440 ATG13O75143 517 aa8.55□□□□□ -1.04
NXF1-215ENST00000533440 VNN2O95498 520 aa8.55□□□□□ -1.04
NXF1-215ENST00000533440 SPATA31C1P0DKV0 1188 aa8.55□□□□□ -1.04
NXF1-215ENST00000533440 KCNE1P15382 129 aa8.55□□□□□ -1.04
NXF1-215ENST00000533440 ATP2B1P20020 1258 aa8.55□□□□□ -1.04
NXF1-215ENST00000533440 CSRP1P21291 193 aaKnown RBP8.55□□□□□ -1.04
NXF1-215ENST00000533440 PSMA5P28066 241 aa8.55□□□□□ -1.04
NXF1-215ENST00000533440 RPL9P32969 192 aaKnown RBP8.55□□□□□ -1.04
NXF1-215ENST00000533440 GRM5P41594 1212 aa8.55□□□□□ -1.04
NXF1-215ENST00000533440 PLCB2Q00722 1185 aa8.55□□□□□ -1.04
NXF1-215ENST00000533440 TNK2Q07912 1038 aa8.55□□□□□ -1.04
NXF1-215ENST00000533440 TMEM196Q5HYL7 178 aa8.55□□□□□ -1.04
NXF1-215ENST00000533440 SH3PXD2AQ5TCZ1 1133 aa8.55□□□□□ -1.04
NXF1-215ENST00000533440 ATF7IP2Q5U623 682 aa8.55□□□□□ -1.04
NXF1-215ENST00000533440 DAB2IPQ5VWQ8 1189 aa8.55□□□□□ -1.04
NXF1-215ENST00000533440 GAREM2Q75VX8 874 aa8.55□□□□□ -1.04
NXF1-215ENST00000533440 HAUS6Q7Z4H7 955 aa8.55□□□□□ -1.04
NXF1-215ENST00000533440 CEP120Q8N960 986 aa8.55□□□□□ -1.04
NXF1-215ENST00000533440 DDX12PQ92771 950 aa8.55□□□□□ -1.04
NXF1-215ENST00000533440 TMEM209Q96SK2 561 aa8.55□□□□□ -1.04
NXF1-215ENST00000533440 TTC12Q9H892 705 aaPredicted RBP8.55□□□□□ -1.04
NXF1-215ENST00000533440 SLC38A7Q9NVC3 462 aa8.55□□□□□ -1.04
NXF1-215ENST00000533440 TPCN1Q9ULQ1 816 aa8.55□□□□□ -1.04
NXF1-215ENST00000533440 LHX6Q9UPM6 363 aa8.55□□□□□ -1.04
NXF1-215ENST00000533440 SLC8A2Q9UPR5 921 aa8.55□□□□□ -1.04
NXF1-215ENST00000533440 NUP210Q8TEM1 1887 aaPredicted RBP8.55□□□□□ -1.04
NXF1-215ENST00000533440 ITPR1Q14643 2758 aa8.54□□□□□ -1.04
NXF1-215ENST00000533440 FAM205CA6NFA0 338 aa8.54□□□□□ -1.04
NXF1-215ENST00000533440 DPYSL4O14531 572 aa8.54□□□□□ -1.04
NXF1-215ENST00000533440 CDX4O14627 284 aaPredicted RBP8.54□□□□□ -1.04
NXF1-215ENST00000533440 TRDMT1O14717 391 aaKnown RBP8.54□□□□□ -1.04
NXF1-215ENST00000533440 RHOBTB1O94844 696 aa8.54□□□□□ -1.04
NXF1-215ENST00000533440 PRAMEF12O95522 483 aa8.54□□□□□ -1.04
NXF1-215ENST00000533440 CAVIN2O95810 425 aa8.54□□□□□ -1.04
NXF1-215ENST00000533440 CPB1P15086 417 aa8.54□□□□□ -1.04
NXF1-215ENST00000533440 LIG1P18858 919 aa8.54□□□□□ -1.04
NXF1-215ENST00000533440 CYP11B2P19099 503 aa8.54□□□□□ -1.04
NXF1-215ENST00000533440 EFNA5P52803 228 aa8.54□□□□□ -1.04
NXF1-215ENST00000533440 YARSP54577 528 aaKnown RBP8.54□□□□□ -1.04
NXF1-215ENST00000533440 PLD1Q13393 1074 aa8.54□□□□□ -1.04
NXF1-215ENST00000533440 ELF2Q15723 593 aa8.54□□□□□ -1.04
NXF1-215ENST00000533440 CALCRLQ16602 461 aa8.54□□□□□ -1.04
NXF1-215ENST00000533440 ITPRIPL2Q3MIP1 535 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms