RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 PLA2G2FQ9BZM2 168 aa19.35■□□□□ 0.69
PCF11-206ENST00000533018 ZFP14Q9HCL3 533 aa19.35■□□□□ 0.69
PCF11-206ENST00000533018 CCDC39Q9UFE4 941 aa19.35■□□□□ 0.69
PCF11-206ENST00000533018 CLIC4Q9Y696 253 aa19.35■□□□□ 0.69
PCF11-206ENST00000533018 COL4A3Q01955 1670 aa19.34■□□□□ 0.69
PCF11-206ENST00000533018 FAM170BA6NMN3 283 aa19.34■□□□□ 0.69
PCF11-206ENST00000533018 OAZ2O95190 189 aa19.34■□□□□ 0.69
PCF11-206ENST00000533018 OR4Q2P0C623 313 aa19.34■□□□□ 0.69
PCF11-206ENST00000533018 MYL4P12829 197 aa19.34■□□□□ 0.69
PCF11-206ENST00000533018 ACOT2P49753 483 aa19.34■□□□□ 0.69
PCF11-206ENST00000533018 CEBPZQ03701 1054 aaKnown RBP19.34■□□□□ 0.69
PCF11-206ENST00000533018 ZC2HC1CQ53FD0 456 aaPredicted RBP19.34■□□□□ 0.69
PCF11-206ENST00000533018 PRSS36Q5K4E3 855 aa19.34■□□□□ 0.69
PCF11-206ENST00000533018 ADALQ6DHV7 355 aa19.34■□□□□ 0.69
PCF11-206ENST00000533018 JADE1Q6IE81 842 aa19.34■□□□□ 0.69
PCF11-206ENST00000533018 TPRG1Q6ZUI0 275 aa19.34■□□□□ 0.69
PCF11-206ENST00000533018 DYMQ7RTS9 669 aa19.34■□□□□ 0.69
PCF11-206ENST00000533018 HS6ST3Q8IZP7 471 aa19.34■□□□□ 0.69
PCF11-206ENST00000533018 ADSSL1Q8N142 457 aa19.34■□□□□ 0.69
PCF11-206ENST00000533018 ELSPBP1Q96BH3 223 aa19.34■□□□□ 0.69
PCF11-206ENST00000533018 OXCT2Q9BYC2 517 aaPredicted RBP19.34■□□□□ 0.69
PCF11-206ENST00000533018 CCSER1Q9C0I3 900 aa19.34■□□□□ 0.69
PCF11-206ENST00000533018 ASAH2Q9NR71 780 aa19.34■□□□□ 0.69
PCF11-206ENST00000533018 DLGAP2Q9P1A6 1054 aa19.34■□□□□ 0.69
PCF11-206ENST00000533018 MAFFQ9ULX9 164 aa19.34■□□□□ 0.69
PCF11-206ENST00000533018 R4GN57 208 aa19.34■□□□□ 0.69
PCF11-206ENST00000533018 ANK1P16157 1881 aa19.34■□□□□ 0.69
PCF11-206ENST00000533018 FAM189A1O60320 539 aa19.33■□□□□ 0.68
PCF11-206ENST00000533018 GLULP15104 373 aa19.33■□□□□ 0.68
PCF11-206ENST00000533018 CCR2P41597 374 aa19.33■□□□□ 0.68
PCF11-206ENST00000533018 GTF2BQ00403 316 aa19.33■□□□□ 0.68
PCF11-206ENST00000533018 GRM2Q14416 872 aa19.33■□□□□ 0.68
PCF11-206ENST00000533018 FAM78AQ5JUQ0 283 aa19.33■□□□□ 0.68
PCF11-206ENST00000533018 SPATA1Q5VX52 437 aa19.33■□□□□ 0.68
PCF11-206ENST00000533018 OVOS1Q6IE37 1185 aa19.33■□□□□ 0.68
PCF11-206ENST00000533018 USP49Q70CQ1 688 aa19.33■□□□□ 0.68
PCF11-206ENST00000533018 CD302Q8IX05 232 aa19.33■□□□□ 0.68
PCF11-206ENST00000533018 KCNN1Q92952 543 aa19.33■□□□□ 0.68
PCF11-206ENST00000533018 TSPAN18Q96SJ8 248 aa19.33■□□□□ 0.68
PCF11-206ENST00000533018 SLITRK6Q9H5Y7 841 aa19.33■□□□□ 0.68
PCF11-206ENST00000533018 SPATA6Q9NWH7 488 aaPredicted RBP19.33■□□□□ 0.68
PCF11-206ENST00000533018 CEP72Q9P209 647 aa19.33■□□□□ 0.68
PCF11-206ENST00000533018 CPSF3Q9UKF6 684 aaKnown RBP19.33■□□□□ 0.68
PCF11-206ENST00000533018 MTF2Q9Y483 593 aaPredicted RBP19.33■□□□□ 0.68
PCF11-206ENST00000533018 FRYLO94915 3013 aa19.33■□□□□ 0.68
PCF11-206ENST00000533018 OR6C75A6NL08 312 aa19.32■□□□□ 0.68
PCF11-206ENST00000533018 ANKRD63C9JTQ0 380 aa19.32■□□□□ 0.68
PCF11-206ENST00000533018 PPEF2O14830 753 aa19.32■□□□□ 0.68
PCF11-206ENST00000533018 MICAL2O94851 1124 aa19.32■□□□□ 0.68
PCF11-206ENST00000533018 GJA1P17302 382 aa19.32■□□□□ 0.68
PCF11-206ENST00000533018 TXLNAP40222 546 aa19.32■□□□□ 0.68
PCF11-206ENST00000533018 DUSP4Q13115 394 aa19.32■□□□□ 0.68
PCF11-206ENST00000533018 CUL4AQ13619 759 aa19.32■□□□□ 0.68
PCF11-206ENST00000533018 TMEM132DQ14C87 1099 aa19.32■□□□□ 0.68
PCF11-206ENST00000533018 ARMCX5Q6P1M9 558 aa19.32■□□□□ 0.68
PCF11-206ENST00000533018 SLC39A4Q6P5W5 647 aa19.32■□□□□ 0.68
PCF11-206ENST00000533018 POTEHQ6S545 545 aa19.32■□□□□ 0.68
PCF11-206ENST00000533018 MAP4K3Q8IVH8 894 aa19.32■□□□□ 0.68
PCF11-206ENST00000533018 BRD9Q9H8M2 597 aa19.32■□□□□ 0.68
PCF11-206ENST00000533018 HEBP1Q9NRV9 189 aa19.32■□□□□ 0.68
PCF11-206ENST00000533018 YIPF1Q9Y548 306 aa19.32■□□□□ 0.68
PCF11-206ENST00000533018 TCHHQ07283 1943 aa19.31■□□□□ 0.68
PCF11-206ENST00000533018 EP300Q09472 2414 aaPredicted RBP19.31■□□□□ 0.68
PCF11-206ENST00000533018 TISP43B9A030 160 aa19.31■□□□□ 0.68
PCF11-206ENST00000533018 NFICP08651 508 aa19.31■□□□□ 0.68
PCF11-206ENST00000533018 SP9P0CG40 484 aa19.31■□□□□ 0.68
PCF11-206ENST00000533018 ODC1P11926 461 aa19.31■□□□□ 0.68
PCF11-206ENST00000533018 ALDH1A3P47895 512 aa19.31■□□□□ 0.68
PCF11-206ENST00000533018 AARSP49588 968 aaKnown RBP eCLIP19.31■□□□□ 0.68
PCF11-206ENST00000533018 EPHB3P54753 998 aa19.31■□□□□ 0.68
PCF11-206ENST00000533018 LILRA4P59901 499 aa19.31■□□□□ 0.68
PCF11-206ENST00000533018 PLD1Q13393 1074 aa19.31■□□□□ 0.68
PCF11-206ENST00000533018 RRAGBQ5VZM2 374 aa19.31■□□□□ 0.68
PCF11-206ENST00000533018 C9orf57Q5W0N0 161 aa19.31■□□□□ 0.68
PCF11-206ENST00000533018 SLFN12LQ6IEE8 588 aa19.31■□□□□ 0.68
PCF11-206ENST00000533018 FAM173BQ6P4H8 233 aa19.31■□□□□ 0.68
PCF11-206ENST00000533018 ZC3H14Q6PJT7 736 aaKnown RBP19.31■□□□□ 0.68
PCF11-206ENST00000533018 ZNF852Q6ZMS4 543 aa19.31■□□□□ 0.68
PCF11-206ENST00000533018 LEMD2Q8NC56 503 aa19.31■□□□□ 0.68
PCF11-206ENST00000533018 SENP8Q96LD8 212 aa19.31■□□□□ 0.68
PCF11-206ENST00000533018 ZSWIM3Q96MP5 696 aa19.31■□□□□ 0.68
PCF11-206ENST00000533018 FIZ1Q96SL8 496 aa19.31■□□□□ 0.68
PCF11-206ENST00000533018 DDX23Q9BUQ8 820 aaKnown RBP19.31■□□□□ 0.68
PCF11-206ENST00000533018 TRMT61BQ9BVS5 477 aaKnown RBP19.31■□□□□ 0.68
PCF11-206ENST00000533018 LTB4R2Q9NPC1 389 aa19.31■□□□□ 0.68
PCF11-206ENST00000533018 AGO2Q9UKV8 859 aaKnown RBP19.31■□□□□ 0.68
PCF11-206ENST00000533018 SLC27A5Q9Y2P5 690 aa19.31■□□□□ 0.68
PCF11-206ENST00000533018 GVINP1Q7Z2Y8 2422 aa19.3■□□□□ 0.68
PCF11-206ENST00000533018 LAMTOR5O43504 91 aa19.3■□□□□ 0.68
PCF11-206ENST00000533018 LMNAP02545 664 aaKnown RBP19.3■□□□□ 0.68
PCF11-206ENST00000533018 ADRB2P07550 413 aa19.3■□□□□ 0.68
PCF11-206ENST00000533018 TYMPP19971 482 aa19.3■□□□□ 0.68
PCF11-206ENST00000533018 GPR17Q13304 367 aa19.3■□□□□ 0.68
PCF11-206ENST00000533018 PTPAQ15257 358 aa19.3■□□□□ 0.68
PCF11-206ENST00000533018 SFR1Q86XK3 245 aa19.3■□□□□ 0.68
PCF11-206ENST00000533018 ZSCAN18Q8TBC5 510 aaPredicted RBP19.3■□□□□ 0.68
PCF11-206ENST00000533018 POMGNT1Q8WZA1 660 aa19.3■□□□□ 0.68
PCF11-206ENST00000533018 SMARCD2Q92925 531 aa19.3■□□□□ 0.68
PCF11-206ENST00000533018 ASB16Q96NS5 453 aa19.3■□□□□ 0.68
PCF11-206ENST00000533018 CLIC6Q96NY7 704 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms