RNA–Protein interactions for RNA: ENST00000532475.1

NUP98-219, Transcript of nucleoporin 98, humanhuman

TSL 4

Gene NUP98, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-219ENST00000532475 INO80B-WBP1J3KQ70 363 aa9.13□□□□□ -0.95
NUP98-219ENST00000532475 PRPF3O43395 683 aaKnown RBP9.13□□□□□ -0.95
NUP98-219ENST00000532475 LRP3O75074 770 aa9.13□□□□□ -0.95
NUP98-219ENST00000532475 XYLBO75191 536 aa9.13□□□□□ -0.95
NUP98-219ENST00000532475 ERLIN2O94905 339 aa9.13□□□□□ -0.95
NUP98-219ENST00000532475 KIF4AO95239 1232 aa9.13□□□□□ -0.95
NUP98-219ENST00000532475 PROS1P07225 676 aa9.13□□□□□ -0.95
NUP98-219ENST00000532475 RHOP08100 348 aa9.13□□□□□ -0.95
NUP98-219ENST00000532475 CHRNB1P11230 501 aa9.13□□□□□ -0.95
NUP98-219ENST00000532475 CEBPBP17676 345 aa9.13□□□□□ -0.95
NUP98-219ENST00000532475 FCARP24071 287 aa9.13□□□□□ -0.95
NUP98-219ENST00000532475 QARSP47897 775 aaKnown RBP9.13□□□□□ -0.95
NUP98-219ENST00000532475 PTENP60484 403 aa9.13□□□□□ -0.95
NUP98-219ENST00000532475 SHC2P98077 582 aa9.13□□□□□ -0.95
NUP98-219ENST00000532475 PSMD5Q16401 504 aa9.13□□□□□ -0.95
NUP98-219ENST00000532475 WDR44Q5JSH3 913 aa9.13□□□□□ -0.95
NUP98-219ENST00000532475 FAM78AQ5JUQ0 283 aa9.13□□□□□ -0.95
NUP98-219ENST00000532475 NOTUMQ6P988 496 aa9.13□□□□□ -0.95
NUP98-219ENST00000532475 FAM160A2Q8N612 972 aaPredicted RBP9.13□□□□□ -0.95
NUP98-219ENST00000532475 ETNPPLQ8TBG4 499 aa9.13□□□□□ -0.95
NUP98-219ENST00000532475 FAM3CQ92520 227 aa9.13□□□□□ -0.95
NUP98-219ENST00000532475 TCEAL4Q96EI5 215 aa9.13□□□□□ -0.95
NUP98-219ENST00000532475 ZSWIM3Q96MP5 696 aa9.13□□□□□ -0.95
NUP98-219ENST00000532475 BRD9Q9H8M2 597 aa9.13□□□□□ -0.95
NUP98-219ENST00000532475 PRDM16Q9HAZ2 1276 aa9.13□□□□□ -0.95
NUP98-219ENST00000532475 RBM12Q9NTZ6 932 aaKnown RBP9.13□□□□□ -0.95
NUP98-219ENST00000532475 SMG1Q96Q15 3661 aaKnown RBP9.12□□□□□ -0.95
NUP98-219ENST00000532475 CYP3A7-CYP3A51PA0A087WV96 503 aa9.12□□□□□ -0.95
NUP98-219ENST00000532475 K7ESF4 209 aa9.12□□□□□ -0.95
NUP98-219ENST00000532475 MAN2B1O00754 1011 aa9.12□□□□□ -0.95
NUP98-219ENST00000532475 AXIN1O15169 862 aa9.12□□□□□ -0.95
NUP98-219ENST00000532475 ASAP2O43150 1006 aa9.12□□□□□ -0.95
NUP98-219ENST00000532475 NPTXRO95502 500 aa9.12□□□□□ -0.95
NUP98-219ENST00000532475 CYP3A7P24462 503 aa9.12□□□□□ -0.95
NUP98-219ENST00000532475 CCNE1P24864 410 aa9.12□□□□□ -0.95
NUP98-219ENST00000532475 HOXA9P31269 272 aa9.12□□□□□ -0.95
NUP98-219ENST00000532475 VIPR2P41587 438 aa9.12□□□□□ -0.95
NUP98-219ENST00000532475 CCR2P41597 374 aa9.12□□□□□ -0.95
NUP98-219ENST00000532475 CREMQ03060 361 aa9.12□□□□□ -0.95
NUP98-219ENST00000532475 MBTD1Q05BQ5 628 aa9.12□□□□□ -0.95
NUP98-219ENST00000532475 RAB33AQ14088 237 aa9.12□□□□□ -0.95
NUP98-219ENST00000532475 EMC2Q15006 297 aa9.12□□□□□ -0.95
NUP98-219ENST00000532475 NTRK3Q16288 839 aa9.12□□□□□ -0.95
NUP98-219ENST00000532475 UVSSAQ2YD98 709 aa9.12□□□□□ -0.95
NUP98-219ENST00000532475 IL31Q6EBC2 164 aa9.12□□□□□ -0.95
NUP98-219ENST00000532475 MAP4K3Q8IVH8 894 aa9.12□□□□□ -0.95
NUP98-219ENST00000532475 CCDC12Q8WUD4 166 aaPredicted RBP9.12□□□□□ -0.95
NUP98-219ENST00000532475 ELSPBP1Q96BH3 223 aa9.12□□□□□ -0.95
NUP98-219ENST00000532475 JPH2Q9BR39 696 aaPredicted RBP9.12□□□□□ -0.95
NUP98-219ENST00000532475 ESYT1Q9BSJ8 1104 aa9.12□□□□□ -0.95
NUP98-219ENST00000532475 TRMT61BQ9BVS5 477 aaKnown RBP9.12□□□□□ -0.95
NUP98-219ENST00000532475 TRIM6Q9C030 488 aaPredicted RBP9.12□□□□□ -0.95
NUP98-219ENST00000532475 ARRDC1-AS1Q9H2J1 176 aa9.12□□□□□ -0.95
NUP98-219ENST00000532475 SMOC1Q9H4F8 434 aa9.12□□□□□ -0.95
NUP98-219ENST00000532475 ZNF334Q9HCZ1 680 aaPredicted RBP9.12□□□□□ -0.95
NUP98-219ENST00000532475 SRA1Q9HD15 236 aaKnown RBP9.12□□□□□ -0.95
NUP98-219ENST00000532475 XPNPEP1Q9NQW7 623 aa9.12□□□□□ -0.95
NUP98-219ENST00000532475 GDE1Q9NZC3 331 aa9.12□□□□□ -0.95
NUP98-219ENST00000532475 RGL1Q9NZL6 768 aa9.12□□□□□ -0.95
NUP98-219ENST00000532475 NBEAQ8NFP9 2946 aa9.12□□□□□ -0.95
NUP98-219ENST00000532475 RALGAPA1Q6GYQ0 2036 aa9.12□□□□□ -0.95
NUP98-219ENST00000532475 FLNBO75369 2602 aaKnown RBP9.12□□□□□ -0.95
NUP98-219ENST00000532475 AKAP13Q12802 2813 aa9.12□□□□□ -0.95
NUP98-219ENST00000532475 SETXQ7Z333 2677 aaKnown RBP9.11□□□□□ -0.95
NUP98-219ENST00000532475 SF3B1O75533 1304 aaKnown RBP eCLIP9.11□□□□□ -0.95
NUP98-219ENST00000532475 A0A087WWV3 80 aa9.11□□□□□ -0.95
NUP98-219ENST00000532475 A0A1B0GUA9 196 aa9.11□□□□□ -0.95
NUP98-219ENST00000532475 PTGESO14684 152 aa9.11□□□□□ -0.95
NUP98-219ENST00000532475 SLC37A4O43826 429 aa9.11□□□□□ -0.95
NUP98-219ENST00000532475 KCNK5O95279 499 aa9.11□□□□□ -0.95
NUP98-219ENST00000532475 SPINK2P20155 84 aa9.11□□□□□ -0.95
NUP98-219ENST00000532475 AXLP30530 894 aa9.11□□□□□ -0.95
NUP98-219ENST00000532475 GDI1P31150 447 aa9.11□□□□□ -0.95
NUP98-219ENST00000532475 YWHABP31946 246 aaKnown RBP9.11□□□□□ -0.95
NUP98-219ENST00000532475 CCR3P51677 355 aa9.11□□□□□ -0.95
NUP98-219ENST00000532475 GRIK3Q13003 919 aa9.11□□□□□ -0.95
NUP98-219ENST00000532475 TUSC3Q13454 348 aa9.11□□□□□ -0.95
NUP98-219ENST00000532475 CTTNQ14247 550 aaKnown RBP9.11□□□□□ -0.95
NUP98-219ENST00000532475 ACAP1Q15027 740 aa9.11□□□□□ -0.95
NUP98-219ENST00000532475 NAB2Q15742 525 aa9.11□□□□□ -0.95
NUP98-219ENST00000532475 XKR9Q5GH70 373 aa9.11□□□□□ -0.95
NUP98-219ENST00000532475 CD300LGQ6UXG3 332 aa9.11□□□□□ -0.95
NUP98-219ENST00000532475 VITQ6UXI7 678 aa9.11□□□□□ -0.95
NUP98-219ENST00000532475 Q6ZS52 159 aa9.11□□□□□ -0.95
NUP98-219ENST00000532475 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.11□□□□□ -0.95
NUP98-219ENST00000532475 BICD2Q8TD16 824 aa9.11□□□□□ -0.95
NUP98-219ENST00000532475 ASAP3Q8TDY4 903 aa9.11□□□□□ -0.95
NUP98-219ENST00000532475 DDX1Q92499 740 aaKnown RBP9.11□□□□□ -0.95
NUP98-219ENST00000532475 DNASE1L2Q92874 299 aa9.11□□□□□ -0.95
NUP98-219ENST00000532475 SRPK1Q96SB4 655 aaKnown RBP9.11□□□□□ -0.95
NUP98-219ENST00000532475 ZFP14Q9HCL3 533 aa9.11□□□□□ -0.95
NUP98-219ENST00000532475 VAV3Q9UKW4 847 aa9.11□□□□□ -0.95
NUP98-219ENST00000532475 USP20Q9Y2K6 914 aa9.11□□□□□ -0.95
NUP98-219ENST00000532475 CDY1Q9Y6F8 540 aa9.11□□□□□ -0.95
NUP98-219ENST00000532475 PIAS3Q9Y6X2 628 aa9.11□□□□□ -0.95
NUP98-219ENST00000532475 LOC400499M0QZD8 3231 aa9.11□□□□□ -0.95
NUP98-219ENST00000532475 NCANO14594 1321 aa9.1□□□□□ -0.95
NUP98-219ENST00000532475 I3L4J1 428 aa9.1□□□□□ -0.95
NUP98-219ENST00000532475 TOP3BO95985 862 aaKnown RBP9.1□□□□□ -0.95
NUP98-219ENST00000532475 POU2F2P09086 479 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms