RNA–Protein interactions for RNA: ENST00000531872.5

NXF1-212, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 390 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-212ENST00000531872 BEST2Q8NFU1 509 aa8.57□□□□□ -1.04
NXF1-212ENST00000531872 FAM200AQ8TCP9 573 aa8.57□□□□□ -1.04
NXF1-212ENST00000531872 BSNDQ8WZ55 320 aa8.57□□□□□ -1.04
NXF1-212ENST00000531872 TCEAL3Q969E4 200 aa8.57□□□□□ -1.04
NXF1-212ENST00000531872 CCDC43Q96MW1 224 aaKnown RBP8.57□□□□□ -1.04
NXF1-212ENST00000531872 MKNK1Q9BUB5 465 aa8.57□□□□□ -1.04
NXF1-212ENST00000531872 EDEM2Q9BV94 578 aa8.57□□□□□ -1.04
NXF1-212ENST00000531872 DUSP15Q9H1R2 295 aaPredicted RBP8.57□□□□□ -1.04
NXF1-212ENST00000531872 SLITRK6Q9H5Y7 841 aa8.57□□□□□ -1.04
NXF1-212ENST00000531872 OBP2AQ9NY56 170 aa8.57□□□□□ -1.04
NXF1-212ENST00000531872 GTSE1Q9NYZ3 720 aa8.57□□□□□ -1.04
NXF1-212ENST00000531872 PCDHA12Q9UN75 941 aa8.57□□□□□ -1.04
NXF1-212ENST00000531872 EML5Q05BV3 1969 aa8.57□□□□□ -1.04
NXF1-212ENST00000531872 LOC400499M0QZD8 3231 aa8.56□□□□□ -1.04
NXF1-212ENST00000531872 FREM2Q5SZK8 3169 aa8.56□□□□□ -1.04
NXF1-212ENST00000531872 A0A087WWV3 80 aa8.56□□□□□ -1.04
NXF1-212ENST00000531872 A0A1W2PRU2 124 aa8.56□□□□□ -1.04
NXF1-212ENST00000531872 C4orf47A7E2U8 309 aa8.56□□□□□ -1.04
NXF1-212ENST00000531872 PODXLO00592 558 aa8.56□□□□□ -1.04
NXF1-212ENST00000531872 TOP3BO95985 862 aaKnown RBP8.56□□□□□ -1.04
NXF1-212ENST00000531872 CEACAM1P13688 526 aa8.56□□□□□ -1.04
NXF1-212ENST00000531872 WEE1P30291 646 aa8.56□□□□□ -1.04
NXF1-212ENST00000531872 NAMPTP43490 491 aa8.56□□□□□ -1.04
NXF1-212ENST00000531872 RING1Q06587 406 aa8.56□□□□□ -1.04
NXF1-212ENST00000531872 TOB2Q14106 344 aaPredicted RBP8.56□□□□□ -1.04
NXF1-212ENST00000531872 TMEM132AQ24JP5 1023 aa8.56□□□□□ -1.04
NXF1-212ENST00000531872 CTXN3Q4LDR2 81 aa8.56□□□□□ -1.04
NXF1-212ENST00000531872 STXBP5Q5T5C0 1151 aa8.56□□□□□ -1.04
NXF1-212ENST00000531872 NT5DC1Q5TFE4 455 aa8.56□□□□□ -1.04
NXF1-212ENST00000531872 ZNF280DQ6N043 979 aa8.56□□□□□ -1.04
NXF1-212ENST00000531872 RNF19BQ6ZMZ0 732 aa8.56□□□□□ -1.04
NXF1-212ENST00000531872 PIK3AP1Q6ZUJ8 805 aa8.56□□□□□ -1.04
NXF1-212ENST00000531872 ARID3BQ8IVW6 561 aaPredicted RBP8.56□□□□□ -1.04
NXF1-212ENST00000531872 CAMKK1Q8N5S9 505 aa8.56□□□□□ -1.04
NXF1-212ENST00000531872 TTC8Q8TAM2 541 aa8.56□□□□□ -1.04
NXF1-212ENST00000531872 OXER1Q8TDS5 423 aa8.56□□□□□ -1.04
NXF1-212ENST00000531872 ZNF274Q96GC6 653 aaPredicted RBP8.56□□□□□ -1.04
NXF1-212ENST00000531872 ZFYVE19Q96K21 471 aa8.56□□□□□ -1.04
NXF1-212ENST00000531872 SUSD3Q96L08 255 aa8.56□□□□□ -1.04
NXF1-212ENST00000531872 ZMAT2Q96NC0 199 aaKnown RBP8.56□□□□□ -1.04
NXF1-212ENST00000531872 SCNM1Q9BWG6 230 aa8.56□□□□□ -1.04
NXF1-212ENST00000531872 DNAJC25Q9H1X3 360 aa8.56□□□□□ -1.04
NXF1-212ENST00000531872 YIPF1Q9Y548 306 aa8.56□□□□□ -1.04
NXF1-212ENST00000531872 LNP1A1A4G5 178 aa8.55□□□□□ -1.04
NXF1-212ENST00000531872 BCLAF3A2AJT9 711 aaKnown RBP8.55□□□□□ -1.04
NXF1-212ENST00000531872 TAF4O00268 1085 aa8.55□□□□□ -1.04
NXF1-212ENST00000531872 CPLX1O14810 134 aa8.55□□□□□ -1.04
NXF1-212ENST00000531872 ATG13O75143 517 aa8.55□□□□□ -1.04
NXF1-212ENST00000531872 VNN2O95498 520 aa8.55□□□□□ -1.04
NXF1-212ENST00000531872 SPATA31C1P0DKV0 1188 aa8.55□□□□□ -1.04
NXF1-212ENST00000531872 KCNE1P15382 129 aa8.55□□□□□ -1.04
NXF1-212ENST00000531872 ATP2B1P20020 1258 aa8.55□□□□□ -1.04
NXF1-212ENST00000531872 CSRP1P21291 193 aaKnown RBP8.55□□□□□ -1.04
NXF1-212ENST00000531872 PSMA5P28066 241 aa8.55□□□□□ -1.04
NXF1-212ENST00000531872 RPL9P32969 192 aaKnown RBP8.55□□□□□ -1.04
NXF1-212ENST00000531872 GRM5P41594 1212 aa8.55□□□□□ -1.04
NXF1-212ENST00000531872 PLCB2Q00722 1185 aa8.55□□□□□ -1.04
NXF1-212ENST00000531872 TNK2Q07912 1038 aa8.55□□□□□ -1.04
NXF1-212ENST00000531872 TMEM196Q5HYL7 178 aa8.55□□□□□ -1.04
NXF1-212ENST00000531872 SH3PXD2AQ5TCZ1 1133 aa8.55□□□□□ -1.04
NXF1-212ENST00000531872 ATF7IP2Q5U623 682 aa8.55□□□□□ -1.04
NXF1-212ENST00000531872 DAB2IPQ5VWQ8 1189 aa8.55□□□□□ -1.04
NXF1-212ENST00000531872 GAREM2Q75VX8 874 aa8.55□□□□□ -1.04
NXF1-212ENST00000531872 HAUS6Q7Z4H7 955 aa8.55□□□□□ -1.04
NXF1-212ENST00000531872 CEP120Q8N960 986 aa8.55□□□□□ -1.04
NXF1-212ENST00000531872 DDX12PQ92771 950 aa8.55□□□□□ -1.04
NXF1-212ENST00000531872 TMEM209Q96SK2 561 aa8.55□□□□□ -1.04
NXF1-212ENST00000531872 TTC12Q9H892 705 aaPredicted RBP8.55□□□□□ -1.04
NXF1-212ENST00000531872 SLC38A7Q9NVC3 462 aa8.55□□□□□ -1.04
NXF1-212ENST00000531872 TPCN1Q9ULQ1 816 aa8.55□□□□□ -1.04
NXF1-212ENST00000531872 LHX6Q9UPM6 363 aa8.55□□□□□ -1.04
NXF1-212ENST00000531872 SLC8A2Q9UPR5 921 aa8.55□□□□□ -1.04
NXF1-212ENST00000531872 NUP210Q8TEM1 1887 aaPredicted RBP8.55□□□□□ -1.04
NXF1-212ENST00000531872 ITPR1Q14643 2758 aa8.54□□□□□ -1.04
NXF1-212ENST00000531872 FAM205CA6NFA0 338 aa8.54□□□□□ -1.04
NXF1-212ENST00000531872 DPYSL4O14531 572 aa8.54□□□□□ -1.04
NXF1-212ENST00000531872 CDX4O14627 284 aaPredicted RBP8.54□□□□□ -1.04
NXF1-212ENST00000531872 TRDMT1O14717 391 aaKnown RBP8.54□□□□□ -1.04
NXF1-212ENST00000531872 RHOBTB1O94844 696 aa8.54□□□□□ -1.04
NXF1-212ENST00000531872 PRAMEF12O95522 483 aa8.54□□□□□ -1.04
NXF1-212ENST00000531872 CAVIN2O95810 425 aa8.54□□□□□ -1.04
NXF1-212ENST00000531872 CPB1P15086 417 aa8.54□□□□□ -1.04
NXF1-212ENST00000531872 LIG1P18858 919 aa8.54□□□□□ -1.04
NXF1-212ENST00000531872 CYP11B2P19099 503 aa8.54□□□□□ -1.04
NXF1-212ENST00000531872 EFNA5P52803 228 aa8.54□□□□□ -1.04
NXF1-212ENST00000531872 YARSP54577 528 aaKnown RBP8.54□□□□□ -1.04
NXF1-212ENST00000531872 PLD1Q13393 1074 aa8.54□□□□□ -1.04
NXF1-212ENST00000531872 ELF2Q15723 593 aa8.54□□□□□ -1.04
NXF1-212ENST00000531872 CALCRLQ16602 461 aa8.54□□□□□ -1.04
NXF1-212ENST00000531872 ITPRIPL2Q3MIP1 535 aa8.54□□□□□ -1.04
NXF1-212ENST00000531872 FSTL4Q6MZW2 842 aa8.54□□□□□ -1.04
NXF1-212ENST00000531872 CPLX2Q6PUV4 134 aaKnown RBP8.54□□□□□ -1.04
NXF1-212ENST00000531872 APBB1IPQ7Z5R6 666 aaPredicted RBP8.54□□□□□ -1.04
NXF1-212ENST00000531872 CATSPER3Q86XQ3 398 aa8.54□□□□□ -1.04
NXF1-212ENST00000531872 GPIHBP1Q8IV16 184 aa8.54□□□□□ -1.04
NXF1-212ENST00000531872 APPL2Q8NEU8 664 aa8.54□□□□□ -1.04
NXF1-212ENST00000531872 DEPTORQ8TB45 409 aa8.54□□□□□ -1.04
NXF1-212ENST00000531872 BPIFB1Q8TDL5 484 aa8.54□□□□□ -1.04
NXF1-212ENST00000531872 ZCCHC14Q8WYQ9 949 aaKnown RBP8.54□□□□□ -1.04
NXF1-212ENST00000531872 CHFRQ96EP1 664 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms