RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 PLA2G2FQ9BZM2 168 aa18.28■□□□□ 0.52
CPSF1-207ENST00000531727 TIMM13Q9Y5L4 95 aaPredicted RBP18.28■□□□□ 0.52
CPSF1-207ENST00000531727 GLULP15104 373 aa18.27■□□□□ 0.52
CPSF1-207ENST00000531727 CCR2P41597 374 aa18.27■□□□□ 0.52
CPSF1-207ENST00000531727 TWF1Q12792 350 aa18.27■□□□□ 0.52
CPSF1-207ENST00000531727 CYP4A22Q5TCH4 519 aa18.27■□□□□ 0.52
CPSF1-207ENST00000531727 TANGO2Q6ICL3 276 aa18.27■□□□□ 0.52
CPSF1-207ENST00000531727 JADE1Q6IE81 842 aa18.27■□□□□ 0.52
CPSF1-207ENST00000531727 IQCEQ6IPM2 695 aa18.27■□□□□ 0.52
CPSF1-207ENST00000531727 DSTYKQ6XUX3 929 aa18.27■□□□□ 0.52
CPSF1-207ENST00000531727 USP49Q70CQ1 688 aa18.27■□□□□ 0.52
CPSF1-207ENST00000531727 USP37Q86T82 979 aa18.27■□□□□ 0.52
CPSF1-207ENST00000531727 C1orf210Q8IVY1 113 aa18.27■□□□□ 0.52
CPSF1-207ENST00000531727 KRI1Q8N9T8 703 aaKnown RBP18.27■□□□□ 0.52
CPSF1-207ENST00000531727 FAM212AQ96EL1 285 aa18.27■□□□□ 0.52
CPSF1-207ENST00000531727 ZNF512Q96ME7 567 aaPredicted RBP18.27■□□□□ 0.52
CPSF1-207ENST00000531727 ST6GALNAC4Q9H4F1 302 aa18.27■□□□□ 0.52
CPSF1-207ENST00000531727 CEP72Q9P209 647 aa18.27■□□□□ 0.52
CPSF1-207ENST00000531727 STK17AQ9UEE5 414 aa18.27■□□□□ 0.52
CPSF1-207ENST00000531727 ZFHX2Q9C0A1 2572 aaPredicted RBP18.27■□□□□ 0.51
CPSF1-207ENST00000531727 ANK1P16157 1881 aa18.26■□□□□ 0.51
CPSF1-207ENST00000531727 TSC2P49815 1807 aa18.26■□□□□ 0.51
CPSF1-207ENST00000531727 OR6C75A6NL08 312 aa18.26■□□□□ 0.51
CPSF1-207ENST00000531727 ANKRD63C9JTQ0 380 aa18.26■□□□□ 0.51
CPSF1-207ENST00000531727 NRG2O14511 850 aaPredicted RBP18.26■□□□□ 0.51
CPSF1-207ENST00000531727 PPEF2O14830 753 aa18.26■□□□□ 0.51
CPSF1-207ENST00000531727 LRRN2O75325 713 aa18.26■□□□□ 0.51
CPSF1-207ENST00000531727 VNN2O95498 520 aa18.26■□□□□ 0.51
CPSF1-207ENST00000531727 TYMPP19971 482 aa18.26■□□□□ 0.51
CPSF1-207ENST00000531727 PAX3P23760 479 aa18.26■□□□□ 0.51
CPSF1-207ENST00000531727 FCARP24071 287 aa18.26■□□□□ 0.51
CPSF1-207ENST00000531727 EPHA5P54756 1037 aa18.26■□□□□ 0.51
CPSF1-207ENST00000531727 LILRA4P59901 499 aa18.26■□□□□ 0.51
CPSF1-207ENST00000531727 RESTQ13127 1097 aa18.26■□□□□ 0.51
CPSF1-207ENST00000531727 ZC2HC1CQ53FD0 456 aaPredicted RBP18.26■□□□□ 0.51
CPSF1-207ENST00000531727 HS6ST3Q8IZP7 471 aa18.26■□□□□ 0.51
CPSF1-207ENST00000531727 LEMD2Q8NC56 503 aa18.26■□□□□ 0.51
CPSF1-207ENST00000531727 CCDC39Q9UFE4 941 aa18.26■□□□□ 0.51
CPSF1-207ENST00000531727 FBXO2Q9UK22 296 aaPredicted RBP18.26■□□□□ 0.51
CPSF1-207ENST00000531727 DERAQ9Y315 318 aa18.26■□□□□ 0.51
CPSF1-207ENST00000531727 YIPF1Q9Y548 306 aa18.26■□□□□ 0.51
CPSF1-207ENST00000531727 SRPRBQ9Y5M8 271 aaKnown RBP18.26■□□□□ 0.51
CPSF1-207ENST00000531727 CFAP54Q96N23 3096 aa18.25■□□□□ 0.51
CPSF1-207ENST00000531727 NFICP08651 508 aa18.25■□□□□ 0.51
CPSF1-207ENST00000531727 OR4Q2P0C623 313 aa18.25■□□□□ 0.51
CPSF1-207ENST00000531727 ACOT2P49753 483 aa18.25■□□□□ 0.51
CPSF1-207ENST00000531727 TMEM132DQ14C87 1099 aa18.25■□□□□ 0.51
CPSF1-207ENST00000531727 UBXN2BQ14CS0 331 aa18.25■□□□□ 0.51
CPSF1-207ENST00000531727 FAM78AQ5JUQ0 283 aa18.25■□□□□ 0.51
CPSF1-207ENST00000531727 C9orf57Q5W0N0 161 aa18.25■□□□□ 0.51
CPSF1-207ENST00000531727 ADALQ6DHV7 355 aa18.25■□□□□ 0.51
CPSF1-207ENST00000531727 OVOS1Q6IE37 1185 aa18.25■□□□□ 0.51
CPSF1-207ENST00000531727 SLFN12LQ6IEE8 588 aa18.25■□□□□ 0.51
CPSF1-207ENST00000531727 HVCN1Q96D96 273 aa18.25■□□□□ 0.51
CPSF1-207ENST00000531727 ASB16Q96NS5 453 aa18.25■□□□□ 0.51
CPSF1-207ENST00000531727 PGLYRP2Q96PD5 576 aa18.25■□□□□ 0.51
CPSF1-207ENST00000531727 OSBPL6Q9BZF3 934 aa18.25■□□□□ 0.51
CPSF1-207ENST00000531727 ASB7Q9H672 318 aa18.25■□□□□ 0.51
CPSF1-207ENST00000531727 ZFP14Q9HCL3 533 aa18.25■□□□□ 0.51
CPSF1-207ENST00000531727 ASAH2Q9NR71 780 aa18.25■□□□□ 0.51
CPSF1-207ENST00000531727 STYXL1Q9Y6J8 313 aa18.25■□□□□ 0.51
CPSF1-207ENST00000531727 PATJQ8NI35 1801 aa18.25■□□□□ 0.51
CPSF1-207ENST00000531727 TISP43B9A030 160 aa18.24■□□□□ 0.51
CPSF1-207ENST00000531727 MOSPD3O75425 235 aa18.24■□□□□ 0.51
CPSF1-207ENST00000531727 ODC1P11926 461 aa18.24■□□□□ 0.51
CPSF1-207ENST00000531727 MYL4P12829 197 aa18.24■□□□□ 0.51
CPSF1-207ENST00000531727 SYT1P21579 422 aa18.24■□□□□ 0.51
CPSF1-207ENST00000531727 GPR17Q13304 367 aa18.24■□□□□ 0.51
CPSF1-207ENST00000531727 PLD1Q13393 1074 aa18.24■□□□□ 0.51
CPSF1-207ENST00000531727 MYBPC2Q14324 1141 aa18.24■□□□□ 0.51
CPSF1-207ENST00000531727 RRAGBQ5VZM2 374 aa18.24■□□□□ 0.51
CPSF1-207ENST00000531727 DYMQ7RTS9 669 aa18.24■□□□□ 0.51
CPSF1-207ENST00000531727 ZNF720Q7Z2F6 126 aa18.24■□□□□ 0.51
CPSF1-207ENST00000531727 SFR1Q86XK3 245 aa18.24■□□□□ 0.51
CPSF1-207ENST00000531727 DNASE1L2Q92874 299 aa18.24■□□□□ 0.51
CPSF1-207ENST00000531727 SENP8Q96LD8 212 aa18.24■□□□□ 0.51
CPSF1-207ENST00000531727 BCO2Q9BYV7 579 aa18.24■□□□□ 0.51
CPSF1-207ENST00000531727 SEMA4AQ9H3S1 761 aa18.24■□□□□ 0.51
CPSF1-207ENST00000531727 LTB4R2Q9NPC1 389 aa18.24■□□□□ 0.51
CPSF1-207ENST00000531727 SEL1LQ9UBV2 794 aa18.24■□□□□ 0.51
CPSF1-207ENST00000531727 AGO2Q9UKV8 859 aaKnown RBP18.24■□□□□ 0.51
CPSF1-207ENST00000531727 MTF2Q9Y483 593 aaPredicted RBP18.24■□□□□ 0.51
CPSF1-207ENST00000531727 ANO9A1A5B4 782 aa18.23■□□□□ 0.51
CPSF1-207ENST00000531727 FAM170BA6NMN3 283 aa18.23■□□□□ 0.51
CPSF1-207ENST00000531727 PIRO00625 290 aa18.23■□□□□ 0.51
CPSF1-207ENST00000531727 SPTLC1O15269 473 aa18.23■□□□□ 0.51
CPSF1-207ENST00000531727 SP9P0CG40 484 aa18.23■□□□□ 0.51
CPSF1-207ENST00000531727 CD72P21854 359 aa18.23■□□□□ 0.51
CPSF1-207ENST00000531727 TXLNAP40222 546 aa18.23■□□□□ 0.51
CPSF1-207ENST00000531727 MAGEA9P43362 315 aa18.23■□□□□ 0.51
CPSF1-207ENST00000531727 POU5F1Q01860 360 aaKnown RBP18.23■□□□□ 0.51
CPSF1-207ENST00000531727 DUSP4Q13115 394 aa18.23■□□□□ 0.51
CPSF1-207ENST00000531727 FAM173BQ6P4H8 233 aa18.23■□□□□ 0.51
CPSF1-207ENST00000531727 TPRG1Q6ZUI0 275 aa18.23■□□□□ 0.51
CPSF1-207ENST00000531727 ADSSL1Q8N142 457 aa18.23■□□□□ 0.51
CPSF1-207ENST00000531727 SMARCD2Q92925 531 aa18.23■□□□□ 0.51
CPSF1-207ENST00000531727 ZSWIM3Q96MP5 696 aa18.23■□□□□ 0.51
CPSF1-207ENST00000531727 CLIC6Q96NY7 704 aa18.23■□□□□ 0.51
CPSF1-207ENST00000531727 CRISPLD1Q9H336 500 aa18.23■□□□□ 0.51
CPSF1-207ENST00000531727 C2CD2Q9Y426 696 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms