RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 RNPC3Q96LT9 517 aaKnown RBP20.44■□□□□ 0.86
SMPD1-205ENST00000531303 UROC1Q96N76 676 aa20.44■□□□□ 0.86
SMPD1-205ENST00000531303 MMS19Q96T76 1030 aa20.44■□□□□ 0.86
SMPD1-205ENST00000531303 TTYH3Q9C0H2 523 aa20.44■□□□□ 0.86
SMPD1-205ENST00000531303 NIF3L1Q9GZT8 377 aa20.44■□□□□ 0.86
SMPD1-205ENST00000531303 SNX9Q9Y5X1 595 aa20.44■□□□□ 0.86
SMPD1-205ENST00000531303 COL4A6Q14031 1691 aa20.44■□□□□ 0.86
SMPD1-205ENST00000531303 GOLGA6L6A8MZA4 724 aa20.43■□□□□ 0.86
SMPD1-205ENST00000531303 PTMAP06454 111 aaKnown RBP20.43■□□□□ 0.86
SMPD1-205ENST00000531303 PNPLA4P41247 253 aa20.43■□□□□ 0.86
SMPD1-205ENST00000531303 RAP1GAPP47736 663 aa20.43■□□□□ 0.86
SMPD1-205ENST00000531303 LILRA4P59901 499 aa20.43■□□□□ 0.86
SMPD1-205ENST00000531303 CCDC173Q0VFZ6 552 aa20.43■□□□□ 0.86
SMPD1-205ENST00000531303 CUL2Q13617 745 aa20.43■□□□□ 0.86
SMPD1-205ENST00000531303 TRIM14Q14142 442 aa20.43■□□□□ 0.86
SMPD1-205ENST00000531303 SV2CQ496J9 727 aa20.43■□□□□ 0.86
SMPD1-205ENST00000531303 FIGNQ5HY92 759 aa20.43■□□□□ 0.86
SMPD1-205ENST00000531303 HERC6Q8IVU3 1022 aa20.43■□□□□ 0.86
SMPD1-205ENST00000531303 KREMEN1Q96MU8 473 aa20.43■□□□□ 0.86
SMPD1-205ENST00000531303 SPAG5Q96R06 1193 aa20.43■□□□□ 0.86
SMPD1-205ENST00000531303 SLC9A7Q96T83 725 aa20.43■□□□□ 0.86
SMPD1-205ENST00000531303 UBE2OQ9C0C9 1292 aaKnown RBP20.43■□□□□ 0.86
SMPD1-205ENST00000531303 CAPN11Q9UMQ6 739 aa20.43■□□□□ 0.86
SMPD1-205ENST00000531303 LUC7L2Q9Y383 392 aaKnown RBP20.43■□□□□ 0.86
SMPD1-205ENST00000531303 KPNA7A9QM74 516 aa20.43■□□□□ 0.86
SMPD1-205ENST00000531303 NT5C1B-RDH14C9J2C7 533 aa20.43■□□□□ 0.86
SMPD1-205ENST00000531303 I3L4J1 428 aa20.43■□□□□ 0.86
SMPD1-205ENST00000531303 GJB5O95377 273 aa20.43■□□□□ 0.86
SMPD1-205ENST00000531303 ALDH2P05091 517 aa20.43■□□□□ 0.86
SMPD1-205ENST00000531303 WEE2P0C1S8 567 aa20.43■□□□□ 0.86
SMPD1-205ENST00000531303 PNMA6AP0CW24 399 aaPredicted RBP20.43■□□□□ 0.86
SMPD1-205ENST00000531303 USP8P40818 1118 aa20.43■□□□□ 0.86
SMPD1-205ENST00000531303 SLC11A1P49279 550 aa20.43■□□□□ 0.86
SMPD1-205ENST00000531303 MFAP3P55082 362 aa20.43■□□□□ 0.86
SMPD1-205ENST00000531303 ARID5BQ14865 1188 aa20.43■□□□□ 0.86
SMPD1-205ENST00000531303 DRAP1Q14919 205 aaPredicted RBP20.43■□□□□ 0.86
SMPD1-205ENST00000531303 DCLRE1AQ6PJP8 1040 aa20.43■□□□□ 0.86
SMPD1-205ENST00000531303 CCDC186Q7Z3E2 898 aa20.43■□□□□ 0.86
SMPD1-205ENST00000531303 PDLIM2Q96JY6 352 aa20.43■□□□□ 0.86
SMPD1-205ENST00000531303 NAA15Q9BXJ9 866 aaKnown RBP20.43■□□□□ 0.86
SMPD1-205ENST00000531303 SMYD3Q9H7B4 428 aa20.43■□□□□ 0.86
SMPD1-205ENST00000531303 IMPACTQ9P2X3 320 aa20.43■□□□□ 0.86
SMPD1-205ENST00000531303 FAN1Q9Y2M0 1017 aa20.43■□□□□ 0.86
SMPD1-205ENST00000531303 AKR1B15C9JRZ8 316 aaPredicted RBP20.42■□□□□ 0.86
SMPD1-205ENST00000531303 NRP1O14786 923 aa20.42■□□□□ 0.86
SMPD1-205ENST00000531303 KIF4AO95239 1232 aa20.42■□□□□ 0.86
SMPD1-205ENST00000531303 ITGB1P05556 798 aa20.42■□□□□ 0.86
SMPD1-205ENST00000531303 P4HA1P13674 534 aa20.42■□□□□ 0.86
SMPD1-205ENST00000531303 CD58P19256 250 aa20.42■□□□□ 0.86
SMPD1-205ENST00000531303 KRT9P35527 623 aa20.42■□□□□ 0.86
SMPD1-205ENST00000531303 ASPAP45381 313 aa20.42■□□□□ 0.86
SMPD1-205ENST00000531303 CDH8P55286 799 aa20.42■□□□□ 0.86
SMPD1-205ENST00000531303 DSTYKQ6XUX3 929 aa20.42■□□□□ 0.86
SMPD1-205ENST00000531303 CMTR2Q8IYT2 770 aaKnown RBP20.42■□□□□ 0.86
SMPD1-205ENST00000531303 ZNF397Q8NF99 534 aaPredicted RBP20.42■□□□□ 0.86
SMPD1-205ENST00000531303 BAP1Q92560 729 aa20.42■□□□□ 0.86
SMPD1-205ENST00000531303 CWH43Q9H720 699 aa20.42■□□□□ 0.86
SMPD1-205ENST00000531303 VRTNQ9H8Y1 702 aa20.42■□□□□ 0.86
SMPD1-205ENST00000531303 RC3H2Q9HBD1 1191 aaKnown RBP20.42■□□□□ 0.86
SMPD1-205ENST00000531303 MRPL42Q9Y6G3 142 aaKnown RBP20.42■□□□□ 0.86
SMPD1-205ENST00000531303 PDE4DIPQ5VU43 2346 aa20.42■□□□□ 0.86
SMPD1-205ENST00000531303 A0A1W2PQJ5 194 aa20.41■□□□□ 0.86
SMPD1-205ENST00000531303 LRRC53A6NM62 1247 aa20.41■□□□□ 0.86
SMPD1-205ENST00000531303 GRXCR1A8MXD5 290 aa20.41■□□□□ 0.86
SMPD1-205ENST00000531303 TLL1O43897 1013 aa20.41■□□□□ 0.86
SMPD1-205ENST00000531303 STAU1O95793 577 aaKnown RBP20.41■□□□□ 0.86
SMPD1-205ENST00000531303 TBXAS1P24557 533 aaPredicted RBP20.41■□□□□ 0.86
SMPD1-205ENST00000531303 BRCC3P46736 316 aa20.41■□□□□ 0.86
SMPD1-205ENST00000531303 RABGGTBP53611 331 aa20.41■□□□□ 0.86
SMPD1-205ENST00000531303 BCAR1P56945 870 aa20.41■□□□□ 0.86
SMPD1-205ENST00000531303 ZBED6P86452 979 aa20.41■□□□□ 0.86
SMPD1-205ENST00000531303 GCNT1Q02742 428 aa20.41■□□□□ 0.86
SMPD1-205ENST00000531303 RASIP1Q5U651 963 aa20.41■□□□□ 0.86
SMPD1-205ENST00000531303 PDXDC1Q6P996 788 aa20.41■□□□□ 0.86
SMPD1-205ENST00000531303 CD300LGQ6UXG3 332 aa20.41■□□□□ 0.86
SMPD1-205ENST00000531303 PHOSPHO2Q8TCD6 241 aa20.41■□□□□ 0.86
SMPD1-205ENST00000531303 RSPH1Q8WYR4 309 aa20.41■□□□□ 0.86
SMPD1-205ENST00000531303 IQCDQ96DY2 449 aa20.41■□□□□ 0.86
SMPD1-205ENST00000531303 COLEC11Q9BWP8 271 aa20.41■□□□□ 0.86
SMPD1-205ENST00000531303 STK33Q9BYT3 514 aa20.41■□□□□ 0.86
SMPD1-205ENST00000531303 EDEM3Q9BZQ6 932 aa20.41■□□□□ 0.86
SMPD1-205ENST00000531303 SDCBP2Q9H190 292 aa20.41■□□□□ 0.86
SMPD1-205ENST00000531303 INSL6Q9Y581 213 aa20.41■□□□□ 0.86
SMPD1-205ENST00000531303 FOXN3O00409 490 aaPredicted RBP20.4■□□□□ 0.86
SMPD1-205ENST00000531303 CYB561D2O14569 222 aa20.4■□□□□ 0.86
SMPD1-205ENST00000531303 MFAP3LO75121 409 aa20.4■□□□□ 0.86
SMPD1-205ENST00000531303 TADA2AO75478 443 aa20.4■□□□□ 0.86
SMPD1-205ENST00000531303 GALTP07902 379 aa20.4■□□□□ 0.86
SMPD1-205ENST00000531303 KRT5P13647 590 aa20.4■□□□□ 0.86
SMPD1-205ENST00000531303 RFX1P22670 979 aa20.4■□□□□ 0.86
SMPD1-205ENST00000531303 ARID5AQ03989 594 aa20.4■□□□□ 0.86
SMPD1-205ENST00000531303 TIGD5Q53EQ6 642 aa20.4■□□□□ 0.86
SMPD1-205ENST00000531303 SENP8Q96LD8 212 aa20.4■□□□□ 0.86
SMPD1-205ENST00000531303 TMEM175Q9BSA9 504 aa20.4■□□□□ 0.86
SMPD1-205ENST00000531303 FBXL5Q9UKA1 691 aa20.4■□□□□ 0.86
SMPD1-205ENST00000531303 PCDHB4Q9Y5E5 795 aa20.4■□□□□ 0.86
SMPD1-205ENST00000531303 HUS1O60921 280 aa20.39■□□□□ 0.85
SMPD1-205ENST00000531303 ALDH7A1P49419 539 aaKnown RBP20.39■□□□□ 0.85
SMPD1-205ENST00000531303 JAM2P57087 298 aa20.39■□□□□ 0.85
SMPD1-205ENST00000531303 HTRA4P83105 476 aaPredicted RBP20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms