RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 H3BNC9 293 aa18.22■□□□□ 0.51
SF3B2-211ENST00000531041 TPM2P07951 284 aa18.22■□□□□ 0.51
SF3B2-211ENST00000531041 MYL6P60660 151 aa18.22■□□□□ 0.51
SF3B2-211ENST00000531041 UBE3AQ05086 875 aa18.22■□□□□ 0.51
SF3B2-211ENST00000531041 CETN1Q12798 172 aa18.22■□□□□ 0.51
SF3B2-211ENST00000531041 ELAVL2Q12926 359 aaKnown RBP18.22■□□□□ 0.51
SF3B2-211ENST00000531041 TIGD5Q53EQ6 642 aa18.22■□□□□ 0.51
SF3B2-211ENST00000531041 FUT10Q6P4F1 479 aa18.22■□□□□ 0.51
SF3B2-211ENST00000531041 DDX53Q86TM3 631 aaKnown RBP18.22■□□□□ 0.51
SF3B2-211ENST00000531041 GAS2L3Q86XJ1 694 aa18.22■□□□□ 0.51
SF3B2-211ENST00000531041 RNF168Q8IYW5 571 aaPredicted RBP18.22■□□□□ 0.51
SF3B2-211ENST00000531041 RNF214Q8ND24 703 aa18.22■□□□□ 0.51
SF3B2-211ENST00000531041 SUSD3Q96L08 255 aa18.22■□□□□ 0.51
SF3B2-211ENST00000531041 VPS16Q9H269 839 aa18.22■□□□□ 0.51
SF3B2-211ENST00000531041 RAB20Q9NX57 234 aa18.22■□□□□ 0.51
SF3B2-211ENST00000531041 GDAP2Q9NXN4 497 aa18.22■□□□□ 0.51
SF3B2-211ENST00000531041 LZTS1Q9Y250 596 aa18.22■□□□□ 0.51
SF3B2-211ENST00000531041 KPNA7A9QM74 516 aa18.21■□□□□ 0.51
SF3B2-211ENST00000531041 SPTLC1O15269 473 aa18.21■□□□□ 0.51
SF3B2-211ENST00000531041 ASS1P00966 412 aaKnown RBP18.21■□□□□ 0.51
SF3B2-211ENST00000531041 BRCC3P46736 316 aa18.21■□□□□ 0.51
SF3B2-211ENST00000531041 COPB1P53618 953 aaKnown RBP18.21■□□□□ 0.51
SF3B2-211ENST00000531041 HABP4Q5JVS0 413 aaKnown RBP18.21■□□□□ 0.51
SF3B2-211ENST00000531041 SPPL3Q8TCT6 385 aa18.21■□□□□ 0.51
SF3B2-211ENST00000531041 ARNTL2Q8WYA1 636 aa18.21■□□□□ 0.51
SF3B2-211ENST00000531041 TAF4BQ92750 862 aa18.21■□□□□ 0.51
SF3B2-211ENST00000531041 VN1R3Q9BXE9 311 aa18.21■□□□□ 0.51
SF3B2-211ENST00000531041 GPR62Q9BZJ7 368 aa18.21■□□□□ 0.51
SF3B2-211ENST00000531041 IMPG2Q9BZV3 1241 aa18.21■□□□□ 0.51
SF3B2-211ENST00000531041 CERS4Q9HA82 394 aa18.21■□□□□ 0.51
SF3B2-211ENST00000531041 M0QZQ0 153 aa18.2■□□□□ 0.5
SF3B2-211ENST00000531041 GPM6BQ13491 265 aa18.2■□□□□ 0.5
SF3B2-211ENST00000531041 SEMA4DQ92854 862 aa18.2■□□□□ 0.5
SF3B2-211ENST00000531041 RBSNQ9H1K0 784 aa18.2■□□□□ 0.5
SF3B2-211ENST00000531041 ALG13Q9NP73 1137 aaKnown RBP18.2■□□□□ 0.5
SF3B2-211ENST00000531041 PUF60Q9UHX1 559 aaKnown RBP18.2■□□□□ 0.5
SF3B2-211ENST00000531041 I3L4J1 428 aa18.19■□□□□ 0.5
SF3B2-211ENST00000531041 PES1O00541 588 aaKnown RBP18.19■□□□□ 0.5
SF3B2-211ENST00000531041 SOD2P04179 222 aa18.19■□□□□ 0.5
SF3B2-211ENST00000531041 ZNF699Q32M78 642 aa18.19■□□□□ 0.5
SF3B2-211ENST00000531041 WDR72Q3MJ13 1102 aa18.19■□□□□ 0.5
SF3B2-211ENST00000531041 FAM171A1Q5VUB5 890 aa18.19■□□□□ 0.5
SF3B2-211ENST00000531041 GPR153Q6NV75 609 aa18.19■□□□□ 0.5
SF3B2-211ENST00000531041 CCDC150Q8NCX0 1101 aa18.19■□□□□ 0.5
SF3B2-211ENST00000531041 LMO3Q8TAP4 145 aa18.19■□□□□ 0.5
SF3B2-211ENST00000531041 LRCH3Q96II8 777 aa18.19■□□□□ 0.5
SF3B2-211ENST00000531041 SENP8Q96LD8 212 aa18.19■□□□□ 0.5
SF3B2-211ENST00000531041 TTYH1Q9H313 450 aaPredicted RBP18.19■□□□□ 0.5
SF3B2-211ENST00000531041 ARHGEF37A1IGU5 675 aa18.18■□□□□ 0.5
SF3B2-211ENST00000531041 LGALS16A8MUM7 142 aa18.18■□□□□ 0.5
SF3B2-211ENST00000531041 CYB561D2O14569 222 aa18.18■□□□□ 0.5
SF3B2-211ENST00000531041 SYN3O14994 580 aa18.18■□□□□ 0.5
SF3B2-211ENST00000531041 LRRN2O75325 713 aa18.18■□□□□ 0.5
SF3B2-211ENST00000531041 FGFR3P22607 806 aa18.18■□□□□ 0.5
SF3B2-211ENST00000531041 USP41Q3LFD5 358 aa18.18■□□□□ 0.5
SF3B2-211ENST00000531041 ZNF667Q5HYK9 610 aa18.18■□□□□ 0.5
SF3B2-211ENST00000531041 DSTYKQ6XUX3 929 aa18.18■□□□□ 0.5
SF3B2-211ENST00000531041 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.18■□□□□ 0.5
SF3B2-211ENST00000531041 GBP6Q6ZN66 633 aa18.18■□□□□ 0.5
SF3B2-211ENST00000531041 DPH6Q7L8W6 267 aa18.18■□□□□ 0.5
SF3B2-211ENST00000531041 TAS1R1Q7RTX1 841 aa18.18■□□□□ 0.5
SF3B2-211ENST00000531041 EHBP1Q8NDI1 1231 aa18.18■□□□□ 0.5
SF3B2-211ENST00000531041 POF1BQ8WVV4 589 aa18.18■□□□□ 0.5
SF3B2-211ENST00000531041 FAXDC2Q96IV6 333 aa18.18■□□□□ 0.5
SF3B2-211ENST00000531041 PI4K2AQ9BTU6 479 aa18.18■□□□□ 0.5
SF3B2-211ENST00000531041 HERC2P3Q9BVR0 1158 aa18.18■□□□□ 0.5
SF3B2-211ENST00000531041 CHST7Q9NS84 486 aa18.18■□□□□ 0.5
SF3B2-211ENST00000531041 GCNT4Q9P109 453 aa18.18■□□□□ 0.5
SF3B2-211ENST00000531041 PCDHB8Q9UN66 801 aa18.18■□□□□ 0.5
SF3B2-211ENST00000531041 SNX9Q9Y5X1 595 aa18.18■□□□□ 0.5
SF3B2-211ENST00000531041 EPOPA6NHQ4 379 aa18.17■□□□□ 0.5
SF3B2-211ENST00000531041 GRM6O15303 877 aa18.17■□□□□ 0.5
SF3B2-211ENST00000531041 SERPINC1P01008 464 aa18.17■□□□□ 0.5
SF3B2-211ENST00000531041 CYP11A1P05108 521 aa18.17■□□□□ 0.5
SF3B2-211ENST00000531041 ODC1P11926 461 aa18.17■□□□□ 0.5
SF3B2-211ENST00000531041 DNAJB1P25685 340 aa18.17■□□□□ 0.5
SF3B2-211ENST00000531041 NOP14P78316 857 aaKnown RBP18.17■□□□□ 0.5
SF3B2-211ENST00000531041 FANCCQ00597 558 aa18.17■□□□□ 0.5
SF3B2-211ENST00000531041 EXOC3L4Q17RC7 722 aa18.17■□□□□ 0.5
SF3B2-211ENST00000531041 FILIP1LQ4L180 1135 aa18.17■□□□□ 0.5
SF3B2-211ENST00000531041 WDR44Q5JSH3 913 aa18.17■□□□□ 0.5
SF3B2-211ENST00000531041 ZNF697Q5TEC3 545 aa18.17■□□□□ 0.5
SF3B2-211ENST00000531041 LIMS2Q7Z4I7 341 aa18.17■□□□□ 0.5
SF3B2-211ENST00000531041 GPR65Q8IYL9 337 aa18.17■□□□□ 0.5
SF3B2-211ENST00000531041 VPS52Q8N1B4 723 aa18.17■□□□□ 0.5
SF3B2-211ENST00000531041 LMAN2LQ9H0V9 348 aa18.17■□□□□ 0.5
SF3B2-211ENST00000531041 RTN4Q9NQC3 1192 aaKnown RBP18.17■□□□□ 0.5
SF3B2-211ENST00000531041 MTCL1Q9Y4B5 1905 aaKnown RBP18.17■□□□□ 0.5
SF3B2-211ENST00000531041 A0A1B0GTH6 734 aa18.16■□□□□ 0.5
SF3B2-211ENST00000531041 HUS1O60921 280 aa18.16■□□□□ 0.5
SF3B2-211ENST00000531041 CTSAP10619 480 aa18.16■□□□□ 0.5
SF3B2-211ENST00000531041 P4HA1P13674 534 aa18.16■□□□□ 0.5
SF3B2-211ENST00000531041 TYMPP19971 482 aa18.16■□□□□ 0.5
SF3B2-211ENST00000531041 TKTP29401 623 aaKnown RBP18.16■□□□□ 0.5
SF3B2-211ENST00000531041 TNNC1P63316 161 aa18.16■□□□□ 0.5
SF3B2-211ENST00000531041 DSG1Q02413 1049 aa18.16■□□□□ 0.5
SF3B2-211ENST00000531041 CAMK1Q14012 370 aa18.16■□□□□ 0.5
SF3B2-211ENST00000531041 FKBP15Q5T1M5 1219 aa18.16■□□□□ 0.5
SF3B2-211ENST00000531041 SPOPLQ6IQ16 392 aa18.16■□□□□ 0.5
SF3B2-211ENST00000531041 TOP6BLQ8N6T0 577 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms