RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 ITGB3P05106 788 aa16.49■□□□□ 0.23
CCS-206ENST00000530961 FGFR3P22607 806 aa16.49■□□□□ 0.23
CCS-206ENST00000530961 IGFBP6P24592 240 aaPredicted RBP16.49■□□□□ 0.23
CCS-206ENST00000530961 POLR2BP30876 1174 aaKnown RBP16.49■□□□□ 0.23
CCS-206ENST00000530961 GTF2H1P32780 548 aa16.49■□□□□ 0.23
CCS-206ENST00000530961 BRCC3P46736 316 aa16.49■□□□□ 0.23
CCS-206ENST00000530961 GLUD2P49448 558 aa16.49■□□□□ 0.23
CCS-206ENST00000530961 TAF6P49848 677 aa16.49■□□□□ 0.23
CCS-206ENST00000530961 CREMQ03060 361 aa16.49■□□□□ 0.23
CCS-206ENST00000530961 KIAA0319Q5VV43 1072 aa16.49■□□□□ 0.23
CCS-206ENST00000530961 LMBRD2Q68DH5 695 aaPredicted RBP16.49■□□□□ 0.23
CCS-206ENST00000530961 FRMD5Q7Z6J6 570 aa16.49■□□□□ 0.23
CCS-206ENST00000530961 APPL2Q8NEU8 664 aa16.49■□□□□ 0.23
CCS-206ENST00000530961 CXorf38Q8TB03 319 aa16.49■□□□□ 0.23
CCS-206ENST00000530961 ZNF516Q92618 1163 aa16.49■□□□□ 0.23
CCS-206ENST00000530961 SRRTQ9BXP5 876 aaKnown RBP16.49■□□□□ 0.23
CCS-206ENST00000530961 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.49■□□□□ 0.232e-6■■□□□ 14.5
CCS-206ENST00000530961 ARMCX3Q9UH62 379 aaPredicted RBP16.49■□□□□ 0.23
CCS-206ENST00000530961 AGAP1Q9UPQ3 857 aa16.49■□□□□ 0.23
CCS-206ENST00000530961 CHD9Q3L8U1 2897 aa16.49■□□□□ 0.23
CCS-206ENST00000530961 PTPRJQ12913 1337 aa16.48■□□□□ 0.23
CCS-206ENST00000530961 C2orf71A6NGG8 1288 aa16.48■□□□□ 0.23
CCS-206ENST00000530961 M0QZQ0 153 aa16.48■□□□□ 0.23
CCS-206ENST00000530961 C4BPAP04003 597 aaKnown RBP16.48■□□□□ 0.23
CCS-206ENST00000530961 KRT19P08727 400 aa16.48■□□□□ 0.23
CCS-206ENST00000530961 DLG4P78352 724 aa16.48■□□□□ 0.23
CCS-206ENST00000530961 MYO1EQ12965 1108 aa16.48■□□□□ 0.23
CCS-206ENST00000530961 PTPN14Q15678 1187 aa16.48■□□□□ 0.23
CCS-206ENST00000530961 STX1AQ16623 288 aa16.48■□□□□ 0.23
CCS-206ENST00000530961 SV2CQ496J9 727 aa16.48■□□□□ 0.23
CCS-206ENST00000530961 PLPP4Q5VZY2 271 aa16.48■□□□□ 0.23
CCS-206ENST00000530961 DSTYKQ6XUX3 929 aa16.48■□□□□ 0.23
CCS-206ENST00000530961 CEP57Q86XR8 500 aa16.48■□□□□ 0.23
CCS-206ENST00000530961 PIK3R5Q8WYR1 880 aa16.48■□□□□ 0.23
CCS-206ENST00000530961 CDCA3Q99618 268 aaPredicted RBP16.48■□□□□ 0.23
CCS-206ENST00000530961 EMILIN2Q9BXX0 1053 aa16.48■□□□□ 0.23
CCS-206ENST00000530961 TLE6Q9H808 572 aa16.48■□□□□ 0.23
CCS-206ENST00000530961 SIX4Q9UIU6 781 aa16.48■□□□□ 0.23
CCS-206ENST00000530961 PCDHB8Q9UN66 801 aa16.48■□□□□ 0.23
CCS-206ENST00000530961 PTPRSQ13332 1948 aa16.48■□□□□ 0.23
CCS-206ENST00000530961 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.47■□□□□ 0.23
CCS-206ENST00000530961 HIDE1A8MVS5 230 aa16.47■□□□□ 0.23
CCS-206ENST00000530961 KPNA7A9QM74 516 aa16.47■□□□□ 0.23
CCS-206ENST00000530961 PPEF2O14830 753 aa16.47■□□□□ 0.23
CCS-206ENST00000530961 PHACTR2O75167 634 aa16.47■□□□□ 0.23
CCS-206ENST00000530961 CSPG5O95196 566 aa16.47■□□□□ 0.23
CCS-206ENST00000530961 BIRC3Q13489 604 aa16.47■□□□□ 0.23
CCS-206ENST00000530961 TRPC3Q13507 836 aa16.47■□□□□ 0.23
CCS-206ENST00000530961 NFKBIBQ15653 356 aa16.47■□□□□ 0.23
CCS-206ENST00000530961 TPD52L1Q16890 204 aaPredicted RBP16.47■□□□□ 0.23
CCS-206ENST00000530961 ZACNQ401N2 412 aa16.47■□□□□ 0.23
CCS-206ENST00000530961 CCDC40Q4G0X9 1142 aa16.47■□□□□ 0.23
CCS-206ENST00000530961 TCEAL5Q5H9L2 206 aa16.47■□□□□ 0.23
CCS-206ENST00000530961 RTP2Q5QGT7 225 aa16.47■□□□□ 0.23
CCS-206ENST00000530961 C1orf220Q5T0J3 134 aa16.47■□□□□ 0.23
CCS-206ENST00000530961 ANKS3Q6ZW76 656 aa16.47■□□□□ 0.23
CCS-206ENST00000530961 SV2AQ7L0J3 742 aa16.47■□□□□ 0.23
CCS-206ENST00000530961 TMEM130Q8N3G9 435 aa16.47■□□□□ 0.23
CCS-206ENST00000530961 RIN2Q8WYP3 895 aaPredicted RBP16.47■□□□□ 0.23
CCS-206ENST00000530961 MED15Q96RN5 788 aa16.47■□□□□ 0.23
CCS-206ENST00000530961 RXFP1Q9HBX9 757 aa16.47■□□□□ 0.23
CCS-206ENST00000530961 FNIP2Q9P278 1114 aa16.47■□□□□ 0.23
CCS-206ENST00000530961 DSEQ9UL01 958 aa16.47■□□□□ 0.23
CCS-206ENST00000530961 H7C4K7 107 aa16.46■□□□□ 0.23
CCS-206ENST00000530961 I3L4J1 428 aa16.46■□□□□ 0.23
CCS-206ENST00000530961 C2CD2LO14523 706 aa16.46■□□□□ 0.23
CCS-206ENST00000530961 SPTLC1O15269 473 aa16.46■□□□□ 0.23
CCS-206ENST00000530961 C1RP00736 705 aa16.46■□□□□ 0.23
CCS-206ENST00000530961 CCDC192P0DO97 292 aa16.46■□□□□ 0.23
CCS-206ENST00000530961 TYMPP19971 482 aa16.46■□□□□ 0.23
CCS-206ENST00000530961 TKTP29401 623 aaKnown RBP16.46■□□□□ 0.23
CCS-206ENST00000530961 ATICP31939 592 aa16.46■□□□□ 0.23
CCS-206ENST00000530961 CA8P35219 290 aa16.46■□□□□ 0.23
CCS-206ENST00000530961 MARSP56192 900 aaKnown RBP16.46■□□□□ 0.23
CCS-206ENST00000530961 TDRD10Q5VZ19 366 aaKnown RBP16.46■□□□□ 0.23
CCS-206ENST00000530961 C15orf39Q6ZRI6 1047 aa16.46■□□□□ 0.23
CCS-206ENST00000530961 PPFIBP1Q86W92 1011 aa16.46■□□□□ 0.23
CCS-206ENST00000530961 LNX1Q8TBB1 728 aaPredicted RBP16.46■□□□□ 0.23
CCS-206ENST00000530961 ENOX1Q8TC92 643 aaKnown RBP16.46■□□□□ 0.23
CCS-206ENST00000530961 AUTS2Q8WXX7 1259 aa16.46■□□□□ 0.23
CCS-206ENST00000530961 HPDLQ96IR7 371 aa16.46■□□□□ 0.23
CCS-206ENST00000530961 FAM84AQ96KN4 292 aa16.46■□□□□ 0.23
CCS-206ENST00000530961 B3GALT6Q96L58 329 aa16.46■□□□□ 0.23
CCS-206ENST00000530961 SENP8Q96LD8 212 aa16.46■□□□□ 0.23
CCS-206ENST00000530961 OXCT2Q9BYC2 517 aaPredicted RBP16.46■□□□□ 0.23
CCS-206ENST00000530961 TMEM8AQ9HCN3 771 aa16.46■□□□□ 0.23
CCS-206ENST00000530961 GDAP2Q9NXN4 497 aa16.46■□□□□ 0.23
CCS-206ENST00000530961 PCDHGC5Q9Y5F6 944 aa16.46■□□□□ 0.23
CCS-206ENST00000530961 BACE2Q9Y5Z0 518 aa16.46■□□□□ 0.23
CCS-206ENST00000530961 CYB561D2O14569 222 aa16.45■□□□□ 0.22
CCS-206ENST00000530961 OAZ2O95190 189 aa16.45■□□□□ 0.22
CCS-206ENST00000530961 STAU1O95793 577 aaKnown RBP16.45■□□□□ 0.22
CCS-206ENST00000530961 CST3P01034 146 aaPredicted RBP16.45■□□□□ 0.22
CCS-206ENST00000530961 CNPP09543 421 aaKnown RBP16.45■□□□□ 0.22
CCS-206ENST00000530961 ODC1P11926 461 aa16.45■□□□□ 0.22
CCS-206ENST00000530961 ALADP13716 330 aa16.45■□□□□ 0.22
CCS-206ENST00000530961 GCLMP48507 274 aa16.45■□□□□ 0.22
CCS-206ENST00000530961 TYRO3Q06418 890 aa16.45■□□□□ 0.22
CCS-206ENST00000530961 PPP3CAQ08209 521 aa16.45■□□□□ 0.22
CCS-206ENST00000530961 NCOA4Q13772 614 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms