RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 LMAN1LQ9HAT1 526 aa16.29■□□□□ 0.2
CAPN1-219ENST00000530495 GPR179Q6PRD1 2367 aa16.29■□□□□ 0.2
CAPN1-219ENST00000530495 PRR5-ARHGAP8B1AHC4 643 aa16.28■□□□□ 0.2
CAPN1-219ENST00000530495 CLDN3O15551 220 aa16.28■□□□□ 0.2
CAPN1-219ENST00000530495 MAPTP10636 758 aaKnown RBP16.28■□□□□ 0.2
CAPN1-219ENST00000530495 HARSP12081 509 aaKnown RBP16.28■□□□□ 0.2
CAPN1-219ENST00000530495 MYL4P12829 197 aa16.28■□□□□ 0.2
CAPN1-219ENST00000530495 PLS3P13797 630 aa16.28■□□□□ 0.2
CAPN1-219ENST00000530495 SMTNP53814 917 aa16.28■□□□□ 0.2
CAPN1-219ENST00000530495 ARHGAP8P85298 464 aa16.28■□□□□ 0.2
CAPN1-219ENST00000530495 MCL1Q07820 350 aa16.28■□□□□ 0.2
CAPN1-219ENST00000530495 PPP2R5DQ14738 602 aa16.28■□□□□ 0.2
CAPN1-219ENST00000530495 NOLC1Q14978 699 aaKnown RBP eCLIP16.28■□□□□ 0.2
CAPN1-219ENST00000530495 ZBTB6Q15916 424 aa16.28■□□□□ 0.2
CAPN1-219ENST00000530495 KCTD17Q8N5Z5 321 aa16.28■□□□□ 0.2
CAPN1-219ENST00000530495 E2F7Q96AV8 911 aa16.28■□□□□ 0.2
CAPN1-219ENST00000530495 LRRC3Q9BY71 257 aa16.28■□□□□ 0.2
CAPN1-219ENST00000530495 ASAH2Q9NR71 780 aa16.28■□□□□ 0.2
CAPN1-219ENST00000530495 ANKFY1Q9P2R3 1169 aa16.28■□□□□ 0.2
CAPN1-219ENST00000530495 TUBGCP4Q9UGJ1 667 aa16.28■□□□□ 0.2
CAPN1-219ENST00000530495 ARNTLO00327 626 aa16.27■□□□□ 0.2
CAPN1-219ENST00000530495 ZNF263O14978 683 aa16.27■□□□□ 0.2
CAPN1-219ENST00000530495 CHRNB1P11230 501 aa16.27■□□□□ 0.2
CAPN1-219ENST00000530495 CPB1P15086 417 aa16.27■□□□□ 0.2
CAPN1-219ENST00000530495 GJA1P17302 382 aa16.27■□□□□ 0.2
CAPN1-219ENST00000530495 LRPAP1P30533 357 aa16.27■□□□□ 0.2
CAPN1-219ENST00000530495 CCR3P51677 355 aa16.27■□□□□ 0.2
CAPN1-219ENST00000530495 ATXN1P54253 815 aaKnown RBP16.27■□□□□ 0.2
CAPN1-219ENST00000530495 LMNB2Q03252 620 aa16.27■□□□□ 0.2
CAPN1-219ENST00000530495 YWHAHQ04917 246 aaPredicted RBP16.27■□□□□ 0.2
CAPN1-219ENST00000530495 TEAD2Q15562 447 aa16.27■□□□□ 0.2
CAPN1-219ENST00000530495 HYIQ5T013 277 aa16.27■□□□□ 0.2
CAPN1-219ENST00000530495 CELF5Q8N6W0 485 aaKnown RBP16.27■□□□□ 0.2
CAPN1-219ENST00000530495 SYT2Q8N9I0 419 aaPredicted RBP16.27■□□□□ 0.2
CAPN1-219ENST00000530495 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.27■□□□□ 0.2
CAPN1-219ENST00000530495 SH2B1Q9NRF2 756 aaPredicted RBP16.27■□□□□ 0.2
CAPN1-219ENST00000530495 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.27■□□□□ 0.2
CAPN1-219ENST00000530495 PIAS3Q9Y6X2 628 aa16.27■□□□□ 0.2
CAPN1-219ENST00000530495 F5P12259 2224 aa16.26■□□□□ 0.19
CAPN1-219ENST00000530495 DNAH14Q0VDD8 3507 aa16.26■□□□□ 0.19
CAPN1-219ENST00000530495 TTC26A0AVF1 554 aa16.26■□□□□ 0.19
CAPN1-219ENST00000530495 HEPACAM2A8MVW5 462 aa16.26■□□□□ 0.19
CAPN1-219ENST00000530495 VNN2O95498 520 aa16.26■□□□□ 0.19
CAPN1-219ENST00000530495 CLTAP09496 248 aa16.26■□□□□ 0.19
CAPN1-219ENST00000530495 CXCL8P10145 99 aa16.26■□□□□ 0.19
CAPN1-219ENST00000530495 CYP3A5P20815 502 aa16.26■□□□□ 0.19
CAPN1-219ENST00000530495 AARSP49588 968 aaKnown RBP eCLIP16.26■□□□□ 0.19
CAPN1-219ENST00000530495 RAD51AP2Q09MP3 1159 aa16.26■□□□□ 0.19
CAPN1-219ENST00000530495 GPR17Q13304 367 aa16.26■□□□□ 0.19
CAPN1-219ENST00000530495 SHKBP1Q8TBC3 707 aa16.26■□□□□ 0.19
CAPN1-219ENST00000530495 PNMA5Q96PV4 448 aa16.26■□□□□ 0.19
CAPN1-219ENST00000530495 HAPLN2Q9GZV7 340 aa16.26■□□□□ 0.19
CAPN1-219ENST00000530495 PPP4R2Q9NY27 417 aa16.26■□□□□ 0.19
CAPN1-219ENST00000530495 KCND2Q9NZV8 630 aa16.26■□□□□ 0.19
CAPN1-219ENST00000530495 NCANO14594 1321 aa16.25■□□□□ 0.19
CAPN1-219ENST00000530495 NEFLP07196 543 aa16.25■□□□□ 0.19
CAPN1-219ENST00000530495 CCNE1P24864 410 aa16.25■□□□□ 0.19
CAPN1-219ENST00000530495 CXCL12P48061 93 aa16.25■□□□□ 0.19
CAPN1-219ENST00000530495 EPHB3P54753 998 aa16.25■□□□□ 0.19
CAPN1-219ENST00000530495 SPAG1Q07617 926 aa16.25■□□□□ 0.19
CAPN1-219ENST00000530495 PLD1Q13393 1074 aa16.25■□□□□ 0.19
CAPN1-219ENST00000530495 C1orf228Q6PIY5 440 aa16.25■□□□□ 0.19
CAPN1-219ENST00000530495 TMEM130Q8N3G9 435 aa16.25■□□□□ 0.19
CAPN1-219ENST00000530495 KCNN1Q92952 543 aa16.25■□□□□ 0.19
CAPN1-219ENST00000530495 MSANTD3Q96H12 275 aa16.25■□□□□ 0.19
CAPN1-219ENST00000530495 TSPAN18Q96SJ8 248 aa16.25■□□□□ 0.19
CAPN1-219ENST00000530495 DNAJC25Q9H1X3 360 aa16.25■□□□□ 0.19
CAPN1-219ENST00000530495 CRISPLD1Q9H336 500 aa16.25■□□□□ 0.19
CAPN1-219ENST00000530495 PARD6AQ9NPB6 346 aa16.25■□□□□ 0.19
CAPN1-219ENST00000530495 GMEB2Q9UKD1 530 aa16.25■□□□□ 0.19
CAPN1-219ENST00000530495 UBQLN1Q9UMX0 589 aaKnown RBP16.25■□□□□ 0.19
CAPN1-219ENST00000530495 YIPF1Q9Y548 306 aa16.25■□□□□ 0.19
CAPN1-219ENST00000530495 TIMM13Q9Y5L4 95 aaPredicted RBP16.25■□□□□ 0.19
CAPN1-219ENST00000530495 OR6C75A6NL08 312 aa16.24■□□□□ 0.19
CAPN1-219ENST00000530495 H0YCG3 227 aa16.24■□□□□ 0.19
CAPN1-219ENST00000530495 CHADO15335 359 aa16.24■□□□□ 0.19
CAPN1-219ENST00000530495 ADRB2P07550 413 aa16.24■□□□□ 0.19
CAPN1-219ENST00000530495 OR4Q2P0C623 313 aa16.24■□□□□ 0.19
CAPN1-219ENST00000530495 SLC12A3P55017 1021 aa16.24■□□□□ 0.19
CAPN1-219ENST00000530495 FCHO2Q0JRZ9 810 aa16.24■□□□□ 0.19
CAPN1-219ENST00000530495 DUSP4Q13115 394 aa16.24■□□□□ 0.19
CAPN1-219ENST00000530495 GAS6Q14393 721 aa16.24■□□□□ 0.19
CAPN1-219ENST00000530495 ZRSR1Q15695 479 aaKnown RBP16.24■□□□□ 0.19
CAPN1-219ENST00000530495 KYAT1Q16773 422 aa16.24■□□□□ 0.19
CAPN1-219ENST00000530495 LAIR1Q6GTX8 287 aa16.24■□□□□ 0.19
CAPN1-219ENST00000530495 CENPPQ6IPU0 288 aa16.24■□□□□ 0.19
CAPN1-219ENST00000530495 TMC8Q8IU68 726 aa16.24■□□□□ 0.19
CAPN1-219ENST00000530495 SPEM1Q8N4L4 309 aa16.24■□□□□ 0.19
CAPN1-219ENST00000530495 CSGALNACT1Q8TDX6 532 aa16.24■□□□□ 0.19
CAPN1-219ENST00000530495 RSPRY1Q96DX4 576 aa16.24■□□□□ 0.19
CAPN1-219ENST00000530495 KIF12Q96FN5 646 aa16.24■□□□□ 0.19
CAPN1-219ENST00000530495 PGLYRP2Q96PD5 576 aa16.24■□□□□ 0.19
CAPN1-219ENST00000530495 RTKNQ9BST9 563 aa16.24■□□□□ 0.19
CAPN1-219ENST00000530495 SLITRK6Q9H5Y7 841 aa16.24■□□□□ 0.19
CAPN1-219ENST00000530495 LARSQ9P2J5 1176 aaKnown RBP16.24■□□□□ 0.19
CAPN1-219ENST00000530495 CDV3Q9UKY7 258 aaKnown RBP16.24■□□□□ 0.19
CAPN1-219ENST00000530495 RAB23Q9ULC3 237 aa16.24■□□□□ 0.19
CAPN1-219ENST00000530495 USP18Q9UMW8 372 aa16.24■□□□□ 0.19
CAPN1-219ENST00000530495 A0A1W2PRU2 124 aa16.23■□□□□ 0.19
CAPN1-219ENST00000530495 LACTBL1A8MY62 500 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms