RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 VNN2O95498 520 aa22.58■■□□□ 1.21
TSPAN4-219ENST00000530404 CLTAP09496 248 aa22.58■■□□□ 1.21
TSPAN4-219ENST00000530404 LIG4P49917 911 aa22.58■■□□□ 1.21
TSPAN4-219ENST00000530404 YWHAHQ04917 246 aaPredicted RBP22.58■■□□□ 1.21
TSPAN4-219ENST00000530404 PPP2R3AQ06190 1150 aa22.58■■□□□ 1.21
TSPAN4-219ENST00000530404 IQCEQ6IPM2 695 aa22.58■■□□□ 1.21
TSPAN4-219ENST00000530404 VITQ6UXI7 678 aa22.58■■□□□ 1.21
TSPAN4-219ENST00000530404 GPBP1Q86WP2 473 aa22.58■■□□□ 1.21
TSPAN4-219ENST00000530404 RMDN1Q96DB5 314 aa22.58■■□□□ 1.21
TSPAN4-219ENST00000530404 CRISPLD1Q9H336 500 aa22.58■■□□□ 1.21
TSPAN4-219ENST00000530404 LARSQ9P2J5 1176 aaKnown RBP22.58■■□□□ 1.21
TSPAN4-219ENST00000530404 YIPF1Q9Y548 306 aa22.58■■□□□ 1.21
TSPAN4-219ENST00000530404 GPR179Q6PRD1 2367 aa22.58■■□□□ 1.21
TSPAN4-219ENST00000530404 CACNA1AO00555 2505 aa22.57■■□□□ 1.2
TSPAN4-219ENST00000530404 K7ENM7 598 aa22.57■■□□□ 1.2
TSPAN4-219ENST00000530404 M0QZQ0 153 aa22.57■■□□□ 1.2
TSPAN4-219ENST00000530404 KINO60870 393 aaKnown RBP22.57■■□□□ 1.2
TSPAN4-219ENST00000530404 LRPAP1P30533 357 aa22.57■■□□□ 1.2
TSPAN4-219ENST00000530404 VIPR2P41587 438 aa22.57■■□□□ 1.2
TSPAN4-219ENST00000530404 FZD5Q13467 585 aa22.57■■□□□ 1.2
TSPAN4-219ENST00000530404 TEAD2Q15562 447 aa22.57■■□□□ 1.2
TSPAN4-219ENST00000530404 ZBTB6Q15916 424 aa22.57■■□□□ 1.2
TSPAN4-219ENST00000530404 ENOX2Q16206 610 aaKnown RBP22.57■■□□□ 1.2
TSPAN4-219ENST00000530404 DSTYKQ6XUX3 929 aa22.57■■□□□ 1.2
TSPAN4-219ENST00000530404 ZNF852Q6ZMS4 543 aa22.57■■□□□ 1.2
TSPAN4-219ENST00000530404 SUMF1Q8NBK3 374 aa22.57■■□□□ 1.2
TSPAN4-219ENST00000530404 FAM212AQ96EL1 285 aa22.57■■□□□ 1.2
TSPAN4-219ENST00000530404 PLEKHA5Q9HAU0 1116 aa22.57■■□□□ 1.2
TSPAN4-219ENST00000530404 ASAH2Q9NR71 780 aa22.57■■□□□ 1.2
TSPAN4-219ENST00000530404 KCND2Q9NZV8 630 aa22.57■■□□□ 1.2
TSPAN4-219ENST00000530404 KCNG1Q9UIX4 513 aa22.57■■□□□ 1.2
TSPAN4-219ENST00000530404 FBXO4Q9UKT5 387 aa22.57■■□□□ 1.2
TSPAN4-219ENST00000530404 UBQLN1Q9UMX0 589 aaKnown RBP22.57■■□□□ 1.2
TSPAN4-219ENST00000530404 GDI1P31150 447 aa22.56■■□□□ 1.2
TSPAN4-219ENST00000530404 GRIN1Q05586 938 aa22.56■■□□□ 1.2
TSPAN4-219ENST00000530404 MCM6Q14566 821 aa22.56■■□□□ 1.2
TSPAN4-219ENST00000530404 ZNF528Q3MIS6 628 aa22.56■■□□□ 1.2
TSPAN4-219ENST00000530404 ARL6IP4Q66PJ3 421 aaKnown RBP22.56■■□□□ 1.2
TSPAN4-219ENST00000530404 GPIHBP1Q8IV16 184 aa22.56■■□□□ 1.2
TSPAN4-219ENST00000530404 MYCT1Q8N699 235 aa22.56■■□□□ 1.2
TSPAN4-219ENST00000530404 DNASE1L2Q92874 299 aa22.56■■□□□ 1.2
TSPAN4-219ENST00000530404 CLDN23Q96B33 292 aa22.56■■□□□ 1.2
TSPAN4-219ENST00000530404 TRMT61BQ9BVS5 477 aaKnown RBP22.56■■□□□ 1.2
TSPAN4-219ENST00000530404 TBX20Q9UMR3 447 aa22.56■■□□□ 1.2
TSPAN4-219ENST00000530404 HNRNPDLO14979 420 aaKnown RBP22.55■■□□□ 1.2
TSPAN4-219ENST00000530404 FAM189A1O60320 539 aa22.55■■□□□ 1.2
TSPAN4-219ENST00000530404 MICAL2O94851 1124 aa22.55■■□□□ 1.2
TSPAN4-219ENST00000530404 FAM13AO94988 1023 aa22.55■■□□□ 1.2
TSPAN4-219ENST00000530404 CDR1P51861 262 aa22.55■■□□□ 1.2
TSPAN4-219ENST00000530404 FOXK2Q01167 660 aa22.55■■□□□ 1.2
TSPAN4-219ENST00000530404 BEST2Q8NFU1 509 aa22.55■■□□□ 1.2
TSPAN4-219ENST00000530404 SHKBP1Q8TBC3 707 aa22.55■■□□□ 1.2
TSPAN4-219ENST00000530404 ZSCAN18Q8TBC5 510 aaPredicted RBP22.55■■□□□ 1.2
TSPAN4-219ENST00000530404 RUBCNQ92622 972 aa22.55■■□□□ 1.2
TSPAN4-219ENST00000530404 SMARCD2Q92925 531 aa22.55■■□□□ 1.2
TSPAN4-219ENST00000530404 TMEM209Q96SK2 561 aa22.55■■□□□ 1.2
TSPAN4-219ENST00000530404 DNAJC25Q9H1X3 360 aa22.55■■□□□ 1.2
TSPAN4-219ENST00000530404 ZHX3Q9H4I2 956 aa22.55■■□□□ 1.2
TSPAN4-219ENST00000530404 SLITRK6Q9H5Y7 841 aa22.55■■□□□ 1.2
TSPAN4-219ENST00000530404 RPF1Q9H9Y2 349 aaKnown RBP22.55■■□□□ 1.2
TSPAN4-219ENST00000530404 ZNF334Q9HCZ1 680 aaPredicted RBP22.55■■□□□ 1.2
TSPAN4-219ENST00000530404 BLOC1S4Q9NUP1 217 aa22.55■■□□□ 1.2
TSPAN4-219ENST00000530404 ODF2LQ9ULJ1 636 aa22.55■■□□□ 1.2
TSPAN4-219ENST00000530404 H0YCG3 227 aa22.54■■□□□ 1.2
TSPAN4-219ENST00000530404 OGTO15294 1046 aa22.54■■□□□ 1.2
TSPAN4-219ENST00000530404 NCAM2O15394 837 aa22.54■■□□□ 1.2
TSPAN4-219ENST00000530404 OAZ2O95190 189 aa22.54■■□□□ 1.2
TSPAN4-219ENST00000530404 MAGEA9P43362 315 aa22.54■■□□□ 1.2
TSPAN4-219ENST00000530404 AARSP49588 968 aaKnown RBP eCLIP22.54■■□□□ 1.28e-6■■■■■ 52.4
TSPAN4-219ENST00000530404 EPHA5P54756 1037 aa22.54■■□□□ 1.2
TSPAN4-219ENST00000530404 DUSP4Q13115 394 aa22.54■■□□□ 1.2
TSPAN4-219ENST00000530404 KARSQ15046 597 aaKnown RBP22.54■■□□□ 1.2
TSPAN4-219ENST00000530404 JADE1Q6IE81 842 aa22.54■■□□□ 1.2
TSPAN4-219ENST00000530404 SLC39A4Q6P5W5 647 aa22.54■■□□□ 1.2
TSPAN4-219ENST00000530404 ERMP1Q7Z2K6 904 aa22.54■■□□□ 1.2
TSPAN4-219ENST00000530404 USP37Q86T82 979 aa22.54■■□□□ 1.2
TSPAN4-219ENST00000530404 KCTD17Q8N5Z5 321 aa22.54■■□□□ 1.2
TSPAN4-219ENST00000530404 CALML4Q96GE6 196 aa22.54■■□□□ 1.2
TSPAN4-219ENST00000530404 NELL2Q99435 816 aa22.54■■□□□ 1.2
TSPAN4-219ENST00000530404 SLC27A5Q9Y2P5 690 aa22.54■■□□□ 1.2
TSPAN4-219ENST00000530404 MRPS17Q9Y2R5 130 aaKnown RBP22.54■■□□□ 1.2
TSPAN4-219ENST00000530404 A0A1W2PRU2 124 aa22.53■■□□□ 1.2
TSPAN4-219ENST00000530404 SOAT2O75908 522 aa22.53■■□□□ 1.2
TSPAN4-219ENST00000530404 PSMC3P17980 439 aa22.53■■□□□ 1.2
TSPAN4-219ENST00000530404 PLCG1P19174 1290 aa22.53■■□□□ 1.2
TSPAN4-219ENST00000530404 CYP3A5P20815 502 aa22.53■■□□□ 1.2
TSPAN4-219ENST00000530404 NMT1P30419 496 aaKnown RBP22.53■■□□□ 1.2
TSPAN4-219ENST00000530404 UBA7P41226 1012 aa22.53■■□□□ 1.2
TSPAN4-219ENST00000530404 MTAPQ13126 283 aa22.53■■□□□ 1.2
TSPAN4-219ENST00000530404 STXBP5Q5T5C0 1151 aa22.53■■□□□ 1.2
TSPAN4-219ENST00000530404 TMC8Q8IU68 726 aa22.53■■□□□ 1.2
TSPAN4-219ENST00000530404 MAP4K3Q8IVH8 894 aa22.53■■□□□ 1.2
TSPAN4-219ENST00000530404 TTC9BQ8N6N2 239 aa22.53■■□□□ 1.2
TSPAN4-219ENST00000530404 IRF7Q92985 503 aa22.53■■□□□ 1.2
TSPAN4-219ENST00000530404 RSPRY1Q96DX4 576 aa22.53■■□□□ 1.2
TSPAN4-219ENST00000530404 MSTO1Q9BUK6 570 aa22.53■■□□□ 1.2
TSPAN4-219ENST00000530404 LRRC3Q9BY71 257 aa22.53■■□□□ 1.2
TSPAN4-219ENST00000530404 MAFFQ9ULX9 164 aa22.53■■□□□ 1.2
TSPAN4-219ENST00000530404 SMC3Q9UQE7 1217 aa22.53■■□□□ 1.2
TSPAN4-219ENST00000530404 HEPACAM2A8MVW5 462 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms