RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 OXCT2Q9BYC2 517 aaPredicted RBP17.56■□□□□ 0.4
COL16A1-216ENST00000529928 C8orf33Q9H7E9 229 aaPredicted RBP17.56■□□□□ 0.4
COL16A1-216ENST00000529928 KMT5AQ9NQR1 393 aa17.56■□□□□ 0.4
COL16A1-216ENST00000529928 LRWD1Q9UFC0 647 aa17.56■□□□□ 0.4
COL16A1-216ENST00000529928 PCDHB8Q9UN66 801 aa17.56■□□□□ 0.4
COL16A1-216ENST00000529928 KIAA1024Q9UPX6 916 aa17.56■□□□□ 0.4
COL16A1-216ENST00000529928 NCANO14594 1321 aa17.55■□□□□ 0.4
COL16A1-216ENST00000529928 CHURC1-FNTBB4DL54 471 aa17.55■□□□□ 0.4
COL16A1-216ENST00000529928 HRO43593 1189 aa17.55■□□□□ 0.4
COL16A1-216ENST00000529928 FNTBP49356 437 aa17.55■□□□□ 0.4
COL16A1-216ENST00000529928 KPNA1P52294 538 aaPredicted RBP17.55■□□□□ 0.4
COL16A1-216ENST00000529928 GUCY1B3Q02153 619 aa17.55■□□□□ 0.4
COL16A1-216ENST00000529928 FCHO2Q0JRZ9 810 aa17.55■□□□□ 0.4
COL16A1-216ENST00000529928 PLD1Q13393 1074 aa17.55■□□□□ 0.4
COL16A1-216ENST00000529928 TAS1R3Q7RTX0 852 aa17.55■□□□□ 0.4
COL16A1-216ENST00000529928 BEST2Q8NFU1 509 aa17.55■□□□□ 0.4
COL16A1-216ENST00000529928 SHKBP1Q8TBC3 707 aa17.55■□□□□ 0.4
COL16A1-216ENST00000529928 DDX1Q92499 740 aaKnown RBP17.55■□□□□ 0.4
COL16A1-216ENST00000529928 DRC1Q96MC2 740 aa17.55■□□□□ 0.4
COL16A1-216ENST00000529928 DDX19AQ9NUU7 478 aaKnown RBP17.55■□□□□ 0.4
COL16A1-216ENST00000529928 YIPF1Q9Y548 306 aa17.55■□□□□ 0.4
COL16A1-216ENST00000529928 STK24Q9Y6E0 443 aa17.55■□□□□ 0.4
COL16A1-216ENST00000529928 CITO14578 2027 aa17.54■□□□□ 0.4
COL16A1-216ENST00000529928 SLC38A8A6NNN8 435 aa17.54■□□□□ 0.4
COL16A1-216ENST00000529928 ABLIM1O14639 778 aa17.54■□□□□ 0.4
COL16A1-216ENST00000529928 YWHAHQ04917 246 aaPredicted RBP17.54■□□□□ 0.4
COL16A1-216ENST00000529928 DGKKQ5KSL6 1271 aa17.54■□□□□ 0.4
COL16A1-216ENST00000529928 TTC38Q5R3I4 469 aa17.54■□□□□ 0.4
COL16A1-216ENST00000529928 DAW1Q8N136 415 aa17.54■□□□□ 0.4
COL16A1-216ENST00000529928 FOXP1Q9H334 677 aaPredicted RBP17.54■□□□□ 0.4
COL16A1-216ENST00000529928 C17orf75Q9HAS0 396 aa17.54■□□□□ 0.4
COL16A1-216ENST00000529928 A0A1W2PRU2 124 aa17.53■□□□□ 0.4
COL16A1-216ENST00000529928 MYBPHLA2RUH7 354 aa17.53■□□□□ 0.4
COL16A1-216ENST00000529928 K7ESF4 209 aa17.53■□□□□ 0.4
COL16A1-216ENST00000529928 MEFVO15553 781 aaPredicted RBP17.53■□□□□ 0.4
COL16A1-216ENST00000529928 HIP1RO75146 1068 aa17.53■□□□□ 0.4
COL16A1-216ENST00000529928 TOM1L1O75674 476 aa17.53■□□□□ 0.4
COL16A1-216ENST00000529928 OAZ2O95190 189 aa17.53■□□□□ 0.4
COL16A1-216ENST00000529928 HARSP12081 509 aaKnown RBP17.53■□□□□ 0.4
COL16A1-216ENST00000529928 DMWDQ09019 674 aa17.53■□□□□ 0.4
COL16A1-216ENST00000529928 PDIA5Q14554 519 aa17.53■□□□□ 0.4
COL16A1-216ENST00000529928 RALGPS2Q86X27 583 aaPredicted RBP17.53■□□□□ 0.4
COL16A1-216ENST00000529928 FAM200AQ8TCP9 573 aa17.53■□□□□ 0.4
COL16A1-216ENST00000529928 SNX29Q8TEQ0 813 aa17.53■□□□□ 0.4
COL16A1-216ENST00000529928 RSPRY1Q96DX4 576 aa17.53■□□□□ 0.4
COL16A1-216ENST00000529928 CHAMP1Q96JM3 812 aa17.53■□□□□ 0.4
COL16A1-216ENST00000529928 LRRC3Q9BY71 257 aa17.53■□□□□ 0.4
COL16A1-216ENST00000529928 RAB34Q9BZG1 259 aa17.53■□□□□ 0.4
COL16A1-216ENST00000529928 RBM12Q9NTZ6 932 aaKnown RBP17.53■□□□□ 0.4
COL16A1-216ENST00000529928 DNM3Q9UQ16 869 aa17.53■□□□□ 0.4
COL16A1-216ENST00000529928 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.53■□□□□ 0.4
COL16A1-216ENST00000529928 SPECC1L-ADORA2AF8WAN1 911 aa17.52■□□□□ 0.4
COL16A1-216ENST00000529928 M0QZQ0 153 aa17.52■□□□□ 0.4
COL16A1-216ENST00000529928 HOXA6P31267 233 aa17.52■□□□□ 0.4
COL16A1-216ENST00000529928 CTHP32929 405 aa17.52■□□□□ 0.4
COL16A1-216ENST00000529928 SOX9P48436 509 aa17.52■□□□□ 0.4
COL16A1-216ENST00000529928 TRAPPC10P48553 1259 aa17.52■□□□□ 0.4
COL16A1-216ENST00000529928 EPHB3P54753 998 aa17.52■□□□□ 0.4
COL16A1-216ENST00000529928 STRN3Q13033 797 aa17.52■□□□□ 0.4
COL16A1-216ENST00000529928 SRSF5Q13243 272 aaKnown RBP17.52■□□□□ 0.4
COL16A1-216ENST00000529928 NOLC1Q14978 699 aaKnown RBP eCLIP17.52■□□□□ 0.4
COL16A1-216ENST00000529928 SLC10A6Q3KNW5 377 aa17.52■□□□□ 0.4
COL16A1-216ENST00000529928 HEATR6Q6AI08 1181 aaKnown RBP17.52■□□□□ 0.4
COL16A1-216ENST00000529928 Q6ZS52 159 aa17.52■□□□□ 0.4
COL16A1-216ENST00000529928 CEP68Q76N32 757 aa17.52■□□□□ 0.4
COL16A1-216ENST00000529928 HAUS6Q7Z4H7 955 aa17.52■□□□□ 0.4
COL16A1-216ENST00000529928 TMC8Q8IU68 726 aa17.52■□□□□ 0.4
COL16A1-216ENST00000529928 ARID3BQ8IVW6 561 aaPredicted RBP17.52■□□□□ 0.4
COL16A1-216ENST00000529928 IGSF22Q8N9C0 903 aa17.52■□□□□ 0.4
COL16A1-216ENST00000529928 C8orf76Q96K31 380 aa17.52■□□□□ 0.4
COL16A1-216ENST00000529928 ANKFY1Q9P2R3 1169 aa17.52■□□□□ 0.4
COL16A1-216ENST00000529928 TUBGCP4Q9UGJ1 667 aa17.52■□□□□ 0.4
COL16A1-216ENST00000529928 PDCD11Q14690 1871 aaKnown RBP17.52■□□□□ 0.39
COL16A1-216ENST00000529928 E9PMD0 336 aa17.51■□□□□ 0.39
COL16A1-216ENST00000529928 DPYSL4O14531 572 aa17.51■□□□□ 0.39
COL16A1-216ENST00000529928 SLC16A4O15374 487 aa17.51■□□□□ 0.39
COL16A1-216ENST00000529928 GDF9O60383 454 aa17.51■□□□□ 0.39
COL16A1-216ENST00000529928 ALDH1A3P47895 512 aa17.51■□□□□ 0.39
COL16A1-216ENST00000529928 GPR17Q13304 367 aa17.51■□□□□ 0.39
COL16A1-216ENST00000529928 ARHGAP29Q52LW3 1261 aa17.51■□□□□ 0.39
COL16A1-216ENST00000529928 IL31Q6EBC2 164 aa17.51■□□□□ 0.39
COL16A1-216ENST00000529928 USP37Q86T82 979 aa17.51■□□□□ 0.39
COL16A1-216ENST00000529928 SYNPOQ8N3V7 929 aa17.51■□□□□ 0.39
COL16A1-216ENST00000529928 FAM160A2Q8N612 972 aaPredicted RBP17.51■□□□□ 0.39
COL16A1-216ENST00000529928 C4orf32Q8N8J7 132 aa17.51■□□□□ 0.39
COL16A1-216ENST00000529928 ZBTB45Q96K62 511 aaPredicted RBP17.51■□□□□ 0.39
COL16A1-216ENST00000529928 PGLYRP2Q96PD5 576 aa17.51■□□□□ 0.39
COL16A1-216ENST00000529928 NTPCRQ9BSD7 190 aaKnown RBP17.51■□□□□ 0.39
COL16A1-216ENST00000529928 TIPINQ9BVW5 301 aa17.51■□□□□ 0.39
COL16A1-216ENST00000529928 DNAJC25Q9H1X3 360 aa17.51■□□□□ 0.39
COL16A1-216ENST00000529928 PLEKHA5Q9HAU0 1116 aa17.51■□□□□ 0.39
COL16A1-216ENST00000529928 OBP2AQ9NY56 170 aa17.51■□□□□ 0.39
COL16A1-216ENST00000529928 KCNG1Q9UIX4 513 aa17.51■□□□□ 0.39
COL16A1-216ENST00000529928 NOL7Q9UMY1 257 aaKnown RBP17.51■□□□□ 0.39
COL16A1-216ENST00000529928 ASB3Q9Y575 518 aa17.51■□□□□ 0.39
COL16A1-216ENST00000529928 OR6C75A6NL08 312 aa17.5■□□□□ 0.39
COL16A1-216ENST00000529928 VNN2O95498 520 aa17.5■□□□□ 0.39
COL16A1-216ENST00000529928 FGF19O95750 216 aa17.5■□□□□ 0.39
COL16A1-216ENST00000529928 OR4Q2P0C623 313 aa17.5■□□□□ 0.39
COL16A1-216ENST00000529928 LRPAP1P30533 357 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms