RNA–Protein interactions for RNA: ENST00000529851.5

APLF-206, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 5

Gene APLF, Length 2,863 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-206ENST00000529851 SRRDQ9UH36 339 aa16.63■□□□□ 0.25
APLF-206ENST00000529851 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.63■□□□□ 0.25
APLF-206ENST00000529851 HAS3O00219 553 aa16.63■□□□□ 0.25
APLF-206ENST00000529851 CHMP2AO43633 222 aa16.63■□□□□ 0.25
APLF-206ENST00000529851 TCF7P36402 384 aaPredicted RBP16.63■□□□□ 0.25
APLF-206ENST00000529851 UGCGQ16739 394 aa16.63■□□□□ 0.25
APLF-206ENST00000529851 DGKDQ16760 1214 aa16.63■□□□□ 0.25
APLF-206ENST00000529851 PTPROQ16827 1216 aa16.63■□□□□ 0.25
APLF-206ENST00000529851 DNAJC14Q6Y2X3 702 aaPredicted RBP16.63■□□□□ 0.25
APLF-206ENST00000529851 SESTD1Q86VW0 696 aa16.63■□□□□ 0.25
APLF-206ENST00000529851 TRIM42Q8IWZ5 723 aa16.63■□□□□ 0.25
APLF-206ENST00000529851 NELFCDQ8IXH7 590 aa16.63■□□□□ 0.25
APLF-206ENST00000529851 UCMAQ8WVF2 138 aa16.63■□□□□ 0.25
APLF-206ENST00000529851 SPATA33Q96N06 139 aa16.63■□□□□ 0.25
APLF-206ENST00000529851 KCTD10Q9H3F6 313 aa16.63■□□□□ 0.25
APLF-206ENST00000529851 ZHX3Q9H4I2 956 aa16.63■□□□□ 0.25
APLF-206ENST00000529851 MAGEA1P43355 309 aa16.62■□□□□ 0.25
APLF-206ENST00000529851 VEGFBP49765 207 aa16.62■□□□□ 0.25
APLF-206ENST00000529851 PTPN11Q06124 597 aaPredicted RBP16.62■□□□□ 0.25
APLF-206ENST00000529851 KLC1Q07866 573 aa16.62■□□□□ 0.25
APLF-206ENST00000529851 ENOX2Q16206 610 aaKnown RBP16.62■□□□□ 0.25
APLF-206ENST00000529851 FOXB2Q5VYV0 432 aa16.62■□□□□ 0.25
APLF-206ENST00000529851 ZNF720Q7Z2F6 126 aa16.62■□□□□ 0.25
APLF-206ENST00000529851 YIPF2Q9BWQ6 316 aa16.62■□□□□ 0.25
APLF-206ENST00000529851 TYW1Q9NV66 732 aaKnown RBP16.62■□□□□ 0.25
APLF-206ENST00000529851 GOLGA6L10A0A0M3HER8 536 aa16.62■□□□□ 0.25
APLF-206ENST00000529851 TLDC2A0PJX2 215 aa16.62■□□□□ 0.25
APLF-206ENST00000529851 H0Y3Z8 333 aa16.62■□□□□ 0.25
APLF-206ENST00000529851 NOP56O00567 594 aaKnown RBP16.62■□□□□ 0.25
APLF-206ENST00000529851 KRT18P05783 430 aaKnown RBP16.62■□□□□ 0.25
APLF-206ENST00000529851 CCNG1P51959 295 aa16.62■□□□□ 0.25
APLF-206ENST00000529851 CYP4A11Q02928 519 aa16.62■□□□□ 0.25
APLF-206ENST00000529851 TNFAIP2Q03169 654 aa16.62■□□□□ 0.25
APLF-206ENST00000529851 ISCUQ9H1K1 167 aa16.62■□□□□ 0.25
APLF-206ENST00000529851 GALNT8Q9NY28 637 aa16.62■□□□□ 0.25
APLF-206ENST00000529851 EXOC7Q9UPT5 735 aa16.62■□□□□ 0.25
APLF-206ENST00000529851 CALUO43852 315 aaPredicted RBP16.61■□□□□ 0.25
APLF-206ENST00000529851 PEX10O60683 326 aa16.61■□□□□ 0.25
APLF-206ENST00000529851 MMP3P08254 477 aa16.61■□□□□ 0.25
APLF-206ENST00000529851 NAMPTP43490 491 aa16.61■□□□□ 0.25
APLF-206ENST00000529851 PSMC4P43686 418 aa16.61■□□□□ 0.25
APLF-206ENST00000529851 DNM2P50570 870 aa16.61■□□□□ 0.25
APLF-206ENST00000529851 COPS2P61201 443 aa16.61■□□□□ 0.25
APLF-206ENST00000529851 WDR78Q5VTH9 848 aa16.61■□□□□ 0.25
APLF-206ENST00000529851 DAW1Q8N136 415 aa16.61■□□□□ 0.25
APLF-206ENST00000529851 SLAIN1Q8ND83 568 aa16.61■□□□□ 0.25
APLF-206ENST00000529851 RMI1Q9H9A7 625 aa16.61■□□□□ 0.25
APLF-206ENST00000529851 PMM2O15305 246 aa16.61■□□□□ 0.25
APLF-206ENST00000529851 FKTNO75072 461 aa16.61■□□□□ 0.25
APLF-206ENST00000529851 SMPD1P17405 629 aa16.61■□□□□ 0.25
APLF-206ENST00000529851 GFPT1Q06210 699 aaPredicted RBP16.61■□□□□ 0.25
APLF-206ENST00000529851 MXD4Q14582 209 aaPredicted RBP16.61■□□□□ 0.25
APLF-206ENST00000529851 LY6KQ17RY6 165 aa16.61■□□□□ 0.25
APLF-206ENST00000529851 KNOP1Q1ED39 458 aaKnown RBP16.61■□□□□ 0.25
APLF-206ENST00000529851 CACNA2D4Q7Z3S7 1137 aa16.61■□□□□ 0.25
APLF-206ENST00000529851 DYDC1Q8WWB3 177 aa16.61■□□□□ 0.25
APLF-206ENST00000529851 LRRC42Q9Y546 428 aa16.61■□□□□ 0.25
APLF-206ENST00000529851 F2P00734 622 aa16.6■□□□□ 0.25
APLF-206ENST00000529851 CCDC38Q502W7 563 aa16.6■□□□□ 0.25
APLF-206ENST00000529851 HERC4Q5GLZ8 1057 aaPredicted RBP16.6■□□□□ 0.25
APLF-206ENST00000529851 FBF1Q8TES7 1133 aa16.6■□□□□ 0.25
APLF-206ENST00000529851 PHACTR1Q9C0D0 580 aa16.6■□□□□ 0.25
APLF-206ENST00000529851 GPR25O00155 361 aa16.6■□□□□ 0.25
APLF-206ENST00000529851 SEPT4O43236 478 aa16.6■□□□□ 0.25
APLF-206ENST00000529851 PALMO75781 387 aa16.6■□□□□ 0.25
APLF-206ENST00000529851 ATP6V1C1P21283 382 aa16.6■□□□□ 0.25
APLF-206ENST00000529851 RPL13P26373 211 aaKnown RBP16.6■□□□□ 0.25
APLF-206ENST00000529851 XKR9Q5GH70 373 aa16.6■□□□□ 0.25
APLF-206ENST00000529851 SCFD1Q8WVM8 642 aa16.6■□□□□ 0.25
APLF-206ENST00000529851 ATXN2LQ8WWM7 1075 aaKnown RBP16.6■□□□□ 0.25
APLF-206ENST00000529851 BICD1Q96G01 975 aa16.6■□□□□ 0.25
APLF-206ENST00000529851 NOX5Q96PH1 765 aa16.6■□□□□ 0.25
APLF-206ENST00000529851 C16orf70Q9BSU1 422 aa16.6■□□□□ 0.25
APLF-206ENST00000529851 C2orf40Q9H1Z8 148 aa16.6■□□□□ 0.25
APLF-206ENST00000529851 CNOT10Q9H9A5 744 aaKnown RBP16.6■□□□□ 0.25
APLF-206ENST00000529851 CTGFP29279 349 aa16.6■□□□□ 0.25
APLF-206ENST00000529851 EFNA5P52803 228 aa16.6■□□□□ 0.25
APLF-206ENST00000529851 FKBP3Q00688 224 aaKnown RBP16.6■□□□□ 0.25
APLF-206ENST00000529851 DHX9Q08211 1270 aaKnown RBP16.6■□□□□ 0.25
APLF-206ENST00000529851 LBRQ14739 615 aaKnown RBP16.6■□□□□ 0.25
APLF-206ENST00000529851 NDNQ99608 321 aa16.6■□□□□ 0.25
APLF-206ENST00000529851 TSEN34Q9BSV6 310 aaKnown RBP16.6■□□□□ 0.25
APLF-206ENST00000529851 AP1M1Q9BXS5 423 aa16.6■□□□□ 0.25
APLF-206ENST00000529851 IKZF4Q9H2S9 585 aa16.6■□□□□ 0.25
APLF-206ENST00000529851 MMRN2Q9H8L6 949 aa16.6■□□□□ 0.25
APLF-206ENST00000529851 ARHGEF3Q9NR81 526 aa16.6■□□□□ 0.25
APLF-206ENST00000529851 DMAC2Q9NW81 257 aa16.6■□□□□ 0.25
APLF-206ENST00000529851 DDX39AO00148 427 aaKnown RBP16.59■□□□□ 0.25
APLF-206ENST00000529851 AOC2O75106 756 aa16.59■□□□□ 0.25
APLF-206ENST00000529851 CABYRO75952 493 aa16.59■□□□□ 0.25
APLF-206ENST00000529851 HMGCRP04035 888 aa16.59■□□□□ 0.25
APLF-206ENST00000529851 LGALS2P05162 132 aa16.59■□□□□ 0.25
APLF-206ENST00000529851 GNAZP19086 355 aa16.59■□□□□ 0.25
APLF-206ENST00000529851 FAM187BQ17R55 369 aa16.59■□□□□ 0.25
APLF-206ENST00000529851 CEP170P1Q96L14 293 aa16.59■□□□□ 0.25
APLF-206ENST00000529851 DDX23Q9BUQ8 820 aaKnown RBP16.59■□□□□ 0.25
APLF-206ENST00000529851 RAB17Q9H0T7 212 aa16.59■□□□□ 0.25
APLF-206ENST00000529851 ARHGAP28Q9P2N2 729 aa16.59■□□□□ 0.25
APLF-206ENST00000529851 STYXL1Q9Y6J8 313 aa16.59■□□□□ 0.25
APLF-206ENST00000529851 DAPK3O43293 454 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms