RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 GPR65Q8IYL9 337 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 TMEM130Q8N3G9 435 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 ZSCAN18Q8TBC5 510 aaPredicted RBP3.89□□□□□ -1.79
PTPRC-213ENST00000529828 SMARCD2Q92925 531 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 IRF7Q92985 503 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 EIF2AK1Q9BQI3 630 aaKnown RBP3.89□□□□□ -1.79
PTPRC-213ENST00000529828 ANP32EQ9BTT0 268 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 C22orf23Q9BZE7 217 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 ZSWIM4Q9H7M6 989 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 POLD4Q9HCU8 107 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 SNX14Q9Y5W7 946 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 COL4A2P08572 1712 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 IGSF10Q6WRI0 2623 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 KCNK5O95279 499 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 POU2F2P09086 479 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 PSMC3P17980 439 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 OSTNP61366 133 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 SOX4Q06945 474 aaPredicted RBP3.88□□□□□ -1.79
PTPRC-213ENST00000529828 TNK2Q07912 1038 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 SPIRE1Q08AE8 756 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 TWF1Q12792 350 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 ELAVL2Q12926 359 aaKnown RBP3.88□□□□□ -1.79
PTPRC-213ENST00000529828 PTGDRQ13258 359 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 ACAP1Q15027 740 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 PON2Q15165 354 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 UVSSAQ2YD98 709 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 KIAA1211LQ6NV74 962 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 PDXDC1Q6P996 788 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 MOXD1Q6UVY6 613 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 KRT25Q7Z3Z0 450 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 NEK8Q86SG6 692 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 YAF2Q8IY57 180 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 TRIM22Q8IYM9 498 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 SPEM1Q8N4L4 309 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 CEP120Q8N960 986 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 CSGALNACT1Q8TDX6 532 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 BSNDQ8WZ55 320 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 FAM20AQ96MK3 541 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 SH3GLB2Q9NR46 395 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 GTSE1Q9NYZ3 720 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 CEP72Q9P209 647 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 PPME1Q9Y570 386 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 INSL5Q9Y5Q6 135 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 ARID2Q68CP9 1835 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 A0A1W2PRU2 124 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 ARHGEF37A1IGU5 675 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 SPECC1L-ADORA2AF8WAN1 911 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 ARNTLO00327 626 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 CPLX1O14810 134 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 TM4SF5O14894 197 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 N4BP3O15049 544 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 DCLK1O15075 740 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 EPN2O95208 641 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 DEXIO95424 95 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 OR4Q2P0C623 313 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 CCDC192P0DO97 292 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 RBM25P49756 843 aaKnown RBP3.88□□□□□ -1.79
PTPRC-213ENST00000529828 RARRES1P49788 294 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 NOVA1P51513 510 aaKnown RBP3.88□□□□□ -1.79
PTPRC-213ENST00000529828 SHC2P98077 582 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 ZNF252P-AS1Q0IIN9 211 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 PRPF4BQ13523 1007 aaKnown RBP3.88□□□□□ -1.79
PTPRC-213ENST00000529828 LRRC32Q14392 662 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 PCBP1Q15365 356 aaKnown RBP eCLIP3.88□□□□□ -1.79
PTPRC-213ENST00000529828 TSGA10IPQ3SY00 556 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 CYP4A22Q5TCH4 519 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 RNF43Q68DV7 783 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 PPP4R3AQ6IN85 833 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 ANKS3Q6ZW76 656 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 ZBTB8OSQ8IWT0 167 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 DAGLBQ8NCG7 672 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 SHKBP1Q8TBC3 707 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 FAM200AQ8TCP9 573 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 DDX1Q92499 740 aaKnown RBP3.88□□□□□ -1.79
PTPRC-213ENST00000529828 PGLYRP2Q96PD5 576 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 PPP1R10Q96QC0 940 aaKnown RBP3.88□□□□□ -1.79
PTPRC-213ENST00000529828 SMG9Q9H0W8 520 aaKnown RBP3.88□□□□□ -1.79
PTPRC-213ENST00000529828 ASAH2Q9NR71 780 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 PRMT7Q9NVM4 692 aaPredicted RBP3.88□□□□□ -1.79
PTPRC-213ENST00000529828 BACE2Q9Y5Z0 518 aa3.88□□□□□ -1.79
PTPRC-213ENST00000529828 PODXLO00592 558 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 WNT7AO00755 349 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 ZNF197O14709 1029 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 RPP40O75818 363 aaKnown RBP3.87□□□□□ -1.79
PTPRC-213ENST00000529828 SOAT2O75908 522 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 HARSP12081 509 aaKnown RBP3.87□□□□□ -1.79
PTPRC-213ENST00000529828 CPB1P15086 417 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 ATP2B1P20020 1258 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 U2AF2P26368 475 aaKnown RBP eCLIP3.87□□□□□ -1.792e-6■■■■□ 19.8
PTPRC-213ENST00000529828 CTHP32929 405 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 MPLP40238 635 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 TXKP42681 527 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 NR5A1Q13285 461 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 TOB2Q14106 344 aaPredicted RBP3.87□□□□□ -1.79
PTPRC-213ENST00000529828 MAPK6Q16659 721 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 UPP1Q16831 310 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 CTXN3Q4LDR2 81 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 CDCA2Q69YH5 1023 aaPredicted RBP3.87□□□□□ -1.79
PTPRC-213ENST00000529828 NAIF1Q69YI7 327 aaPredicted RBP3.87□□□□□ -1.79
PTPRC-213ENST00000529828 IQCEQ6IPM2 695 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms