RNA–Protein interactions for RNA: ENST00000529611.5

CCDC90B-213, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2 BASIC

Gene CCDC90B, Length 1,986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-213ENST00000529611 ZNF606Q8WXB4 792 aa16.49■□□□□ 0.23
CCDC90B-213ENST00000529611 CCDC94Q9BW85 323 aaPredicted RBP16.49■□□□□ 0.23
CCDC90B-213ENST00000529611 EIF2AQ9BY44 585 aaKnown RBP16.49■□□□□ 0.23
CCDC90B-213ENST00000529611 BCO2Q9BYV7 579 aa16.49■□□□□ 0.23
CCDC90B-213ENST00000529611 NXF1Q9UBU9 619 aaKnown RBP16.49■□□□□ 0.23
CCDC90B-213ENST00000529611 SCN10AQ9Y5Y9 1956 aa16.48■□□□□ 0.23
CCDC90B-213ENST00000529611 CEP104O60308 925 aa16.48■□□□□ 0.23
CCDC90B-213ENST00000529611 KPNA6O60684 536 aa16.48■□□□□ 0.23
CCDC90B-213ENST00000529611 PGK1P00558 417 aa16.48■□□□□ 0.23
CCDC90B-213ENST00000529611 GNAT1P11488 350 aa16.48■□□□□ 0.23
CCDC90B-213ENST00000529611 SSTR3P32745 418 aaPredicted RBP16.48■□□□□ 0.23
CCDC90B-213ENST00000529611 NSFP46459 744 aaKnown RBP16.48■□□□□ 0.23
CCDC90B-213ENST00000529611 WDR72Q3MJ13 1102 aa16.48■□□□□ 0.23
CCDC90B-213ENST00000529611 ZNF394Q53GI3 561 aa16.48■□□□□ 0.23
CCDC90B-213ENST00000529611 SMYD5Q6GMV2 418 aa16.48■□□□□ 0.23
CCDC90B-213ENST00000529611 RASGEF1CQ8N431 466 aa16.48■□□□□ 0.23
CCDC90B-213ENST00000529611 SELENOOQ9BVL4 669 aa16.48■□□□□ 0.23
CCDC90B-213ENST00000529611 UPF3AQ9H1J1 476 aaKnown RBP16.48■□□□□ 0.23
CCDC90B-213ENST00000529611 VRTNQ9H8Y1 702 aa16.48■□□□□ 0.23
CCDC90B-213ENST00000529611 ARFGAP3Q9NP61 516 aa16.48■□□□□ 0.23
CCDC90B-213ENST00000529611 AVENQ9NQS1 362 aaPredicted RBP16.48■□□□□ 0.23
CCDC90B-213ENST00000529611 MYBL1P10243 752 aa16.47■□□□□ 0.23
CCDC90B-213ENST00000529611 POLR2BP30876 1174 aaKnown RBP16.47■□□□□ 0.23
CCDC90B-213ENST00000529611 ATICP31939 592 aa16.47■□□□□ 0.23
CCDC90B-213ENST00000529611 GUCY2FP51841 1108 aa16.47■□□□□ 0.23
CCDC90B-213ENST00000529611 MESDQ14696 234 aa16.47■□□□□ 0.23
CCDC90B-213ENST00000529611 DCAF12L1Q5VU92 463 aa16.47■□□□□ 0.23
CCDC90B-213ENST00000529611 APBB1IPQ7Z5R6 666 aaPredicted RBP16.47■□□□□ 0.23
CCDC90B-213ENST00000529611 NT5DC4Q86YG4 428 aa16.47■□□□□ 0.23
CCDC90B-213ENST00000529611 CD302Q8IX05 232 aa16.47■□□□□ 0.23
CCDC90B-213ENST00000529611 HNRNPLLQ8WVV9 542 aaKnown RBP16.47■□□□□ 0.23
CCDC90B-213ENST00000529611 TRIM11Q96F44 468 aa16.47■□□□□ 0.23
CCDC90B-213ENST00000529611 FAXDC2Q96IV6 333 aa16.47■□□□□ 0.23
CCDC90B-213ENST00000529611 BTBD6Q96KE9 485 aa16.47■□□□□ 0.23
CCDC90B-213ENST00000529611 ZSWIM1Q9BR11 485 aa16.47■□□□□ 0.23
CCDC90B-213ENST00000529611 MTG1Q9BT17 334 aaPredicted RBP16.47■□□□□ 0.23
CCDC90B-213ENST00000529611 LRRC1Q9BTT6 524 aa16.47■□□□□ 0.23
CCDC90B-213ENST00000529611 SNTG2Q9NY99 539 aa16.47■□□□□ 0.23
CCDC90B-213ENST00000529611 TMEM59LQ9UK28 342 aa16.47■□□□□ 0.23
CCDC90B-213ENST00000529611 TRIP11Q15643 1979 aa16.47■□□□□ 0.23
CCDC90B-213ENST00000529611 TMEM110-MUSTN1A8MSY1 372 aa16.47■□□□□ 0.23
CCDC90B-213ENST00000529611 SEPT4O43236 478 aa16.47■□□□□ 0.23
CCDC90B-213ENST00000529611 RRM1P23921 792 aa16.47■□□□□ 0.23
CCDC90B-213ENST00000529611 BRD2P25440 801 aaKnown RBP16.47■□□□□ 0.23
CCDC90B-213ENST00000529611 RAP1GAPP47736 663 aa16.47■□□□□ 0.23
CCDC90B-213ENST00000529611 YWHAEP62258 255 aaKnown RBP16.47■□□□□ 0.23
CCDC90B-213ENST00000529611 CACNB2Q08289 660 aaPredicted RBP16.47■□□□□ 0.23
CCDC90B-213ENST00000529611 C2CD6Q53TS8 623 aa16.47■□□□□ 0.23
CCDC90B-213ENST00000529611 CXCL17Q6UXB2 119 aa16.47■□□□□ 0.23
CCDC90B-213ENST00000529611 NME8Q8N427 588 aa16.47■□□□□ 0.23
CCDC90B-213ENST00000529611 KIF12Q96FN5 646 aa16.47■□□□□ 0.23
CCDC90B-213ENST00000529611 RPS6KC1Q96S38 1066 aa16.47■□□□□ 0.23
CCDC90B-213ENST00000529611 SDCBP2Q9H190 292 aa16.47■□□□□ 0.23
CCDC90B-213ENST00000529611 CXCL16Q9H2A7 254 aa16.47■□□□□ 0.23
CCDC90B-213ENST00000529611 PLEKHA5Q9HAU0 1116 aa16.47■□□□□ 0.23
CCDC90B-213ENST00000529611 ITGA11Q9UKX5 1188 aa16.47■□□□□ 0.23
CCDC90B-213ENST00000529611 NOC2LQ9Y3T9 749 aaKnown RBP16.47■□□□□ 0.23
CCDC90B-213ENST00000529611 RALGAPA2Q2PPJ7 1873 aa16.47■□□□□ 0.23
CCDC90B-213ENST00000529611 CASP8AP2Q9UKL3 1982 aa16.47■□□□□ 0.23
CCDC90B-213ENST00000529611 DNAH12Q6ZR08 3092 aa16.46■□□□□ 0.23
CCDC90B-213ENST00000529611 HTTP42858 3142 aa16.46■□□□□ 0.23
CCDC90B-213ENST00000529611 PGRMC1O00264 195 aaKnown RBP16.46■□□□□ 0.23
CCDC90B-213ENST00000529611 COMTP21964 271 aa16.46■□□□□ 0.23
CCDC90B-213ENST00000529611 AXLP30530 894 aa16.46■□□□□ 0.23
CCDC90B-213ENST00000529611 CRYBB1P53674 252 aaPredicted RBP16.46■□□□□ 0.23
CCDC90B-213ENST00000529611 CCDC70Q6NSX1 233 aa16.46■□□□□ 0.23
CCDC90B-213ENST00000529611 PHF13Q86YI8 300 aaPredicted RBP16.46■□□□□ 0.23
CCDC90B-213ENST00000529611 HDAC7Q8WUI4 952 aa16.46■□□□□ 0.23
CCDC90B-213ENST00000529611 ALG3Q92685 438 aa16.46■□□□□ 0.23
CCDC90B-213ENST00000529611 CAPNS2Q96L46 248 aa16.46■□□□□ 0.23
CCDC90B-213ENST00000529611 SNX27Q96L92 541 aa16.46■□□□□ 0.23
CCDC90B-213ENST00000529611 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.46■□□□□ 0.23
CCDC90B-213ENST00000529611 CARD9Q9H257 536 aa16.46■□□□□ 0.23
CCDC90B-213ENST00000529611 DPP3Q9NY33 737 aa16.46■□□□□ 0.23
CCDC90B-213ENST00000529611 AGAP1Q9UPQ3 857 aa16.46■□□□□ 0.23
CCDC90B-213ENST00000529611 PIN4Q9Y237 131 aaKnown RBP16.46■□□□□ 0.23
CCDC90B-213ENST00000529611 HES2Q9Y543 173 aa16.46■□□□□ 0.23
CCDC90B-213ENST00000529611 MIF4GDA9UHW6 222 aaKnown RBP16.46■□□□□ 0.22
CCDC90B-213ENST00000529611 ERLIN1O75477 346 aa16.46■□□□□ 0.22
CCDC90B-213ENST00000529611 TOMM70O94826 608 aa16.46■□□□□ 0.22
CCDC90B-213ENST00000529611 RARBP10826 455 aa16.46■□□□□ 0.22
CCDC90B-213ENST00000529611 CDH8P55286 799 aa16.46■□□□□ 0.22
CCDC90B-213ENST00000529611 NKX3-2P78367 333 aa16.46■□□□□ 0.22
CCDC90B-213ENST00000529611 LONRF2Q1L5Z9 754 aa16.46■□□□□ 0.22
CCDC90B-213ENST00000529611 NBPF20Q3BBV1 942 aa16.46■□□□□ 0.22
CCDC90B-213ENST00000529611 BEND6Q5SZJ8 279 aaPredicted RBP16.46■□□□□ 0.22
CCDC90B-213ENST00000529611 LLGL2Q6P1M3 1020 aa16.46■□□□□ 0.22
CCDC90B-213ENST00000529611 CPNE8Q86YQ8 564 aa16.46■□□□□ 0.22
CCDC90B-213ENST00000529611 TFAP2BQ92481 460 aa16.46■□□□□ 0.22
CCDC90B-213ENST00000529611 CD101Q93033 1021 aa16.46■□□□□ 0.22
CCDC90B-213ENST00000529611 HPDLQ96IR7 371 aa16.46■□□□□ 0.22
CCDC90B-213ENST00000529611 VCPIP1Q96JH7 1222 aa16.46■□□□□ 0.22
CCDC90B-213ENST00000529611 C11orf70Q9BRQ4 267 aa16.46■□□□□ 0.22
CCDC90B-213ENST00000529611 NXF3Q9H4D5 531 aaKnown RBP16.46■□□□□ 0.22
CCDC90B-213ENST00000529611 SMYD3Q9H7B4 428 aa16.46■□□□□ 0.22
CCDC90B-213ENST00000529611 GTF2IRD1Q9UHL9 959 aa16.46■□□□□ 0.22
CCDC90B-213ENST00000529611 DMGDHQ9UI17 866 aaKnown RBP16.46■□□□□ 0.22
CCDC90B-213ENST00000529611 ADAMTS4O75173 837 aa16.45■□□□□ 0.22
CCDC90B-213ENST00000529611 ZMYND10O75800 440 aa16.45■□□□□ 0.22
CCDC90B-213ENST00000529611 MRPS25P82663 173 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms