RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 CYP4A11Q02928 519 aa12.78□□□□□ -0.36
AMBRA1-207ENST00000529553 PLD1Q13393 1074 aa12.78□□□□□ -0.36
AMBRA1-207ENST00000529553 NPY5RQ15761 445 aa12.78□□□□□ -0.36
AMBRA1-207ENST00000529553 MAPK6Q16659 721 aa12.78□□□□□ -0.36
AMBRA1-207ENST00000529553 TMEM132AQ24JP5 1023 aa12.78□□□□□ -0.36
AMBRA1-207ENST00000529553 CTXN3Q4LDR2 81 aa12.78□□□□□ -0.36
AMBRA1-207ENST00000529553 XKR4Q5GH76 650 aa12.78□□□□□ -0.36
AMBRA1-207ENST00000529553 Q6ZUG5 572 aa12.78□□□□□ -0.36
AMBRA1-207ENST00000529553 APBB1IPQ7Z5R6 666 aaPredicted RBP12.78□□□□□ -0.36
AMBRA1-207ENST00000529553 NEK8Q86SG6 692 aa12.78□□□□□ -0.36
AMBRA1-207ENST00000529553 MCPH1Q8NEM0 835 aa12.78□□□□□ -0.36
AMBRA1-207ENST00000529553 APPL2Q8NEU8 664 aa12.78□□□□□ -0.36
AMBRA1-207ENST00000529553 TTC8Q8TAM2 541 aa12.78□□□□□ -0.36
AMBRA1-207ENST00000529553 CCDC43Q96MW1 224 aaKnown RBP12.78□□□□□ -0.36
AMBRA1-207ENST00000529553 LRRC3BQ96PB8 259 aa12.78□□□□□ -0.36
AMBRA1-207ENST00000529553 EIF2AK1Q9BQI3 630 aaKnown RBP12.78□□□□□ -0.36
AMBRA1-207ENST00000529553 GDAQ9Y2T3 454 aa12.78□□□□□ -0.36
AMBRA1-207ENST00000529553 ASB3Q9Y575 518 aa12.78□□□□□ -0.36
AMBRA1-207ENST00000529553 SDK1Q7Z5N4 2213 aa12.78□□□□□ -0.36
AMBRA1-207ENST00000529553 LAMA1P25391 3075 aa12.77□□□□□ -0.36
AMBRA1-207ENST00000529553 GCN1Q92616 2671 aaKnown RBP12.77□□□□□ -0.36
AMBRA1-207ENST00000529553 A0A1W2PRU2 124 aa12.77□□□□□ -0.37
AMBRA1-207ENST00000529553 UPK3BL1B0FP48 263 aa12.77□□□□□ -0.37
AMBRA1-207ENST00000529553 UPK3BL2E5RIL1 263 aa12.77□□□□□ -0.37
AMBRA1-207ENST00000529553 CCNT1O60563 726 aaKnown RBP12.77□□□□□ -0.37
AMBRA1-207ENST00000529553 PRKCBP05771 671 aa12.77□□□□□ -0.37
AMBRA1-207ENST00000529553 EPHB3P54753 998 aa12.77□□□□□ -0.37
AMBRA1-207ENST00000529553 EVCP57679 992 aa12.77□□□□□ -0.37
AMBRA1-207ENST00000529553 CACNB1Q02641 598 aaPredicted RBP12.77□□□□□ -0.37
AMBRA1-207ENST00000529553 SSRP1Q08945 709 aaKnown RBP12.77□□□□□ -0.37
AMBRA1-207ENST00000529553 ZNF280DQ6N043 979 aa12.77□□□□□ -0.37
AMBRA1-207ENST00000529553 PKN3Q6P5Z2 889 aa12.77□□□□□ -0.37
AMBRA1-207ENST00000529553 ALKAL1Q6UXT8 129 aa12.77□□□□□ -0.37
AMBRA1-207ENST00000529553 PROSER1Q86XN7 944 aa12.77□□□□□ -0.37
AMBRA1-207ENST00000529553 TMC8Q8IU68 726 aa12.77□□□□□ -0.37
AMBRA1-207ENST00000529553 BEST2Q8NFU1 509 aa12.77□□□□□ -0.37
AMBRA1-207ENST00000529553 BPIFB1Q8TDL5 484 aa12.77□□□□□ -0.37
AMBRA1-207ENST00000529553 EXOC4Q96A65 974 aa12.77□□□□□ -0.37
AMBRA1-207ENST00000529553 AGXT2Q9BYV1 514 aa12.77□□□□□ -0.37
AMBRA1-207ENST00000529553 GPSM3Q9Y4H4 160 aa12.77□□□□□ -0.37
AMBRA1-207ENST00000529553 TICRRQ7Z2Z1 1910 aa12.77□□□□□ -0.37
AMBRA1-207ENST00000529553 FLNBO75369 2602 aaKnown RBP12.77□□□□□ -0.37
AMBRA1-207ENST00000529553 VWA8A3KMH1 1905 aa12.76□□□□□ -0.37
AMBRA1-207ENST00000529553 PODXLO00592 558 aa12.76□□□□□ -0.37
AMBRA1-207ENST00000529553 HYAL3O43820 417 aaPredicted RBP12.76□□□□□ -0.37
AMBRA1-207ENST00000529553 DEXIO95424 95 aa12.76□□□□□ -0.37
AMBRA1-207ENST00000529553 DRD1P21728 446 aa12.76□□□□□ -0.37
AMBRA1-207ENST00000529553 LMAN2Q12907 356 aa12.76□□□□□ -0.37
AMBRA1-207ENST00000529553 FBXO43Q4G163 708 aa12.76□□□□□ -0.37
AMBRA1-207ENST00000529553 GLRA4Q5JXX5 417 aa12.76□□□□□ -0.37
AMBRA1-207ENST00000529553 FSTL4Q6MZW2 842 aa12.76□□□□□ -0.37
AMBRA1-207ENST00000529553 RNF19BQ6ZMZ0 732 aa12.76□□□□□ -0.37
AMBRA1-207ENST00000529553 SYT13Q7L8C5 426 aa12.76□□□□□ -0.37
AMBRA1-207ENST00000529553 ZFYVE19Q96K21 471 aa12.76□□□□□ -0.37
AMBRA1-207ENST00000529553 SUSD3Q96L08 255 aa12.76□□□□□ -0.37
AMBRA1-207ENST00000529553 MKNK1Q9BUB5 465 aa12.76□□□□□ -0.37
AMBRA1-207ENST00000529553 CCDC113Q9H0I3 377 aa12.76□□□□□ -0.37
AMBRA1-207ENST00000529553 GOLGA2P5Q9HBQ8 144 aa12.76□□□□□ -0.37
AMBRA1-207ENST00000529553 TOPORSQ9NS56 1045 aaPredicted RBP12.76□□□□□ -0.37
AMBRA1-207ENST00000529553 EVLQ9UI08 416 aaPredicted RBP12.76□□□□□ -0.37
AMBRA1-207ENST00000529553 AKAP13Q12802 2813 aa12.76□□□□□ -0.37
AMBRA1-207ENST00000529553 ITPR1Q14643 2758 aa12.75□□□□□ -0.37
AMBRA1-207ENST00000529553 CCDC194A0A1B0GVG4 234 aa12.75□□□□□ -0.37
AMBRA1-207ENST00000529553 LAMA5O15230 3695 aa12.75□□□□□ -0.37
AMBRA1-207ENST00000529553 APBB3O95704 486 aa12.75□□□□□ -0.37
AMBRA1-207ENST00000529553 PDIA3P30101 505 aaKnown RBP12.75□□□□□ -0.37
AMBRA1-207ENST00000529553 ALDH1A3P47895 512 aa12.75□□□□□ -0.37
AMBRA1-207ENST00000529553 YARSP54577 528 aaKnown RBP12.75□□□□□ -0.37
AMBRA1-207ENST00000529553 SOX4Q06945 474 aaPredicted RBP12.75□□□□□ -0.37
AMBRA1-207ENST00000529553 TNK2Q07912 1038 aa12.75□□□□□ -0.37
AMBRA1-207ENST00000529553 USP39Q53GS9 565 aaKnown RBP12.75□□□□□ -0.37
AMBRA1-207ENST00000529553 ARHGAP15Q53QZ3 475 aa12.75□□□□□ -0.37
AMBRA1-207ENST00000529553 PDZD3Q86UT5 571 aa12.75□□□□□ -0.37
AMBRA1-207ENST00000529553 DEFB124Q8NES8 71 aa12.75□□□□□ -0.37
AMBRA1-207ENST00000529553 SMG1Q96Q15 3661 aaKnown RBP12.75□□□□□ -0.37
AMBRA1-207ENST00000529553 ZMYM5Q9UJ78 669 aa12.75□□□□□ -0.37
AMBRA1-207ENST00000529553 PCDHA12Q9UN75 941 aa12.75□□□□□ -0.37
AMBRA1-207ENST00000529553 YIPF1Q9Y548 306 aa12.75□□□□□ -0.37
AMBRA1-207ENST00000529553 NUB1Q9Y5A7 615 aa12.75□□□□□ -0.37
AMBRA1-207ENST00000529553 DCLK1O15075 740 aa12.74□□□□□ -0.37
AMBRA1-207ENST00000529553 MEFVO15553 781 aaPredicted RBP12.74□□□□□ -0.37
AMBRA1-207ENST00000529553 RNF40O75150 1001 aa12.74□□□□□ -0.37
AMBRA1-207ENST00000529553 OAZ2O95190 189 aa12.74□□□□□ -0.37
AMBRA1-207ENST00000529553 CPB1P15086 417 aa12.74□□□□□ -0.37
AMBRA1-207ENST00000529553 KCNE1P15382 129 aa12.74□□□□□ -0.37
AMBRA1-207ENST00000529553 ATP2B1P20020 1258 aa12.74□□□□□ -0.37
AMBRA1-207ENST00000529553 MARCKSP29966 332 aaPredicted RBP12.74□□□□□ -0.37
AMBRA1-207ENST00000529553 NAMPTP43490 491 aa12.74□□□□□ -0.37
AMBRA1-207ENST00000529553 MCM2P49736 904 aa12.74□□□□□ -0.37
AMBRA1-207ENST00000529553 EFNA5P52803 228 aa12.74□□□□□ -0.37
AMBRA1-207ENST00000529553 IRX4P78413 519 aa12.74□□□□□ -0.37
AMBRA1-207ENST00000529553 RUNX3Q13761 415 aa12.74□□□□□ -0.37
AMBRA1-207ENST00000529553 EEF1DP3Q658K8 133 aa12.74□□□□□ -0.37
AMBRA1-207ENST00000529553 PMS2CLQ68D20 193 aa12.74□□□□□ -0.37
AMBRA1-207ENST00000529553 GAREM2Q75VX8 874 aa12.74□□□□□ -0.37
AMBRA1-207ENST00000529553 PIP4P1Q86T03 277 aa12.74□□□□□ -0.37
AMBRA1-207ENST00000529553 CCDC26Q8TAB7 109 aa12.74□□□□□ -0.37
AMBRA1-207ENST00000529553 DDX12PQ92771 950 aa12.74□□□□□ -0.37
AMBRA1-207ENST00000529553 KCNB2Q92953 911 aa12.74□□□□□ -0.37
AMBRA1-207ENST00000529553 PSMG2Q969U7 264 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms