RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 SSU72P8A0A1W2PR75 194 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 KIAA0391O15091 583 aaKnown RBP8.53□□□□□ -1.04
CTNND1-220ENST00000529526 TBX3O15119 743 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 NPTXRO95502 500 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 PLEKP08567 350 aaPredicted RBP8.53□□□□□ -1.04
CTNND1-220ENST00000529526 ITIH2P19823 946 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 HLA-DPA1P20036 260 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 HMOX2P30519 316 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 ITGA8P53708 1063 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 SYTL3Q4VX76 610 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 CCNI2Q6ZMN8 369 aaPredicted RBP8.53□□□□□ -1.04
CTNND1-220ENST00000529526 SH3TC2Q8TF17 1288 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 TRIM62Q9BVG3 475 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 KCNH7Q9NS40 1196 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 C20orf96Q9NUD7 363 aaPredicted RBP8.53□□□□□ -1.04
CTNND1-220ENST00000529526 PSMC3IPQ9P2W1 217 aaPredicted RBP8.53□□□□□ -1.04
CTNND1-220ENST00000529526 ANGPT2O15123 496 aa8.52□□□□□ -1.05
CTNND1-220ENST00000529526 ZNF200P98182 395 aaPredicted RBP8.52□□□□□ -1.05
CTNND1-220ENST00000529526 TAF1CQ15572 869 aaPredicted RBP8.52□□□□□ -1.05
CTNND1-220ENST00000529526 ZC3H15Q8WU90 426 aaKnown RBP8.52□□□□□ -1.05
CTNND1-220ENST00000529526 TEKT4Q8WW24 435 aa8.52□□□□□ -1.05
CTNND1-220ENST00000529526 GRAMD1AQ96CP6 724 aa8.52□□□□□ -1.05
CTNND1-220ENST00000529526 ZNF512BQ96KM6 892 aaPredicted RBP8.52□□□□□ -1.05
CTNND1-220ENST00000529526 MED15Q96RN5 788 aa8.52□□□□□ -1.05
CTNND1-220ENST00000529526 RUSC1Q9BVN2 902 aa8.52□□□□□ -1.05
CTNND1-220ENST00000529526 TRAF3IP3Q9Y228 551 aa8.52□□□□□ -1.05
CTNND1-220ENST00000529526 ARL2BPQ9Y2Y0 163 aa8.52□□□□□ -1.05
CTNND1-220ENST00000529526 ADGRA2Q96PE1 1338 aa8.52□□□□□ -1.05
CTNND1-220ENST00000529526 EXTL3O43909 919 aa8.52□□□□□ -1.05
CTNND1-220ENST00000529526 PPP1R37O75864 691 aa8.52□□□□□ -1.05
CTNND1-220ENST00000529526 ENO3P13929 434 aaPredicted RBP8.52□□□□□ -1.05
CTNND1-220ENST00000529526 RAD51Q06609 339 aa8.52□□□□□ -1.05
CTNND1-220ENST00000529526 STX3Q13277 289 aa8.52□□□□□ -1.05
CTNND1-220ENST00000529526 DCAF6Q58WW2 860 aa8.52□□□□□ -1.05
CTNND1-220ENST00000529526 MTHFD1LQ6UB35 978 aa8.52□□□□□ -1.05
CTNND1-220ENST00000529526 EFHBQ8N7U6 833 aa8.52□□□□□ -1.05
CTNND1-220ENST00000529526 RUBCNLQ9H714 662 aa8.52□□□□□ -1.05
CTNND1-220ENST00000529526 TMEM8AQ9HCN3 771 aa8.52□□□□□ -1.05
CTNND1-220ENST00000529526 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.52□□□□□ -1.052e-7■■□□□ 14.4
CTNND1-220ENST00000529526 hCG_2014768A0A024R1R8 64 aa8.52□□□□□ -1.05
CTNND1-220ENST00000529526 CFAP73A6NFT4 308 aa8.52□□□□□ -1.05
CTNND1-220ENST00000529526 KLHDC7AQ5VTJ3 777 aa8.52□□□□□ -1.05
CTNND1-220ENST00000529526 HHIPL2Q6UWX4 724 aa8.52□□□□□ -1.05
CTNND1-220ENST00000529526 FAM71DQ8N9W8 422 aa8.52□□□□□ -1.05
CTNND1-220ENST00000529526 SPATA18Q8TC71 538 aa8.52□□□□□ -1.05
CTNND1-220ENST00000529526 MTBPQ96DY7 904 aa8.52□□□□□ -1.05
CTNND1-220ENST00000529526 NEUROG2Q9H2A3 272 aa8.52□□□□□ -1.05
CTNND1-220ENST00000529526 SUPT3HB4E1H0 165 aa8.52□□□□□ -1.05
CTNND1-220ENST00000529526 ENTPD3O75355 529 aa8.52□□□□□ -1.05
CTNND1-220ENST00000529526 SUPT3HO75486 399 aa8.52□□□□□ -1.05
CTNND1-220ENST00000529526 RPS6KA5O75582 802 aa8.52□□□□□ -1.05
CTNND1-220ENST00000529526 TCN1P20061 433 aaPredicted RBP8.52□□□□□ -1.05
CTNND1-220ENST00000529526 CARSP49589 748 aaKnown RBP8.52□□□□□ -1.05
CTNND1-220ENST00000529526 NUMBP49757 651 aa8.52□□□□□ -1.05
CTNND1-220ENST00000529526 RARS2Q5T160 578 aaKnown RBP8.52□□□□□ -1.05
CTNND1-220ENST00000529526 LRIG3Q6UXM1 1119 aa8.52□□□□□ -1.05
CTNND1-220ENST00000529526 C3orf62Q6ZUJ4 267 aa8.52□□□□□ -1.05
CTNND1-220ENST00000529526 SAMD7Q7Z3H4 446 aa8.52□□□□□ -1.05
CTNND1-220ENST00000529526 MFN1Q8IWA4 741 aa8.52□□□□□ -1.05
CTNND1-220ENST00000529526 IPMKQ8NFU5 416 aa8.52□□□□□ -1.05
CTNND1-220ENST00000529526 TEX12Q9BXU0 123 aa8.52□□□□□ -1.05
CTNND1-220ENST00000529526 MYOZ2Q9NPC6 264 aa8.52□□□□□ -1.05
CTNND1-220ENST00000529526 E9PCH4 1651 aa8.52□□□□□ -1.05
CTNND1-220ENST00000529526 C19orf81C9J6K1 198 aa8.51□□□□□ -1.05
CTNND1-220ENST00000529526 EIF3DO15371 548 aaKnown RBP eCLIP8.51□□□□□ -1.05
CTNND1-220ENST00000529526 PJA2O43164 708 aa8.51□□□□□ -1.05
CTNND1-220ENST00000529526 DGKIO75912 1065 aa8.51□□□□□ -1.05
CTNND1-220ENST00000529526 ITGA4P13612 1032 aa8.51□□□□□ -1.05
CTNND1-220ENST00000529526 KRT4P19013 534 aa8.51□□□□□ -1.05
CTNND1-220ENST00000529526 GPD1P21695 349 aa8.51□□□□□ -1.05
CTNND1-220ENST00000529526 IL10P22301 178 aa8.51□□□□□ -1.05
CTNND1-220ENST00000529526 AKT1P31749 480 aa8.51□□□□□ -1.05
CTNND1-220ENST00000529526 SNAPC2Q13487 334 aa8.51□□□□□ -1.05
CTNND1-220ENST00000529526 MAPRE2Q15555 327 aa8.51□□□□□ -1.05
CTNND1-220ENST00000529526 MGAT5BQ3V5L5 792 aa8.51□□□□□ -1.05
CTNND1-220ENST00000529526 FBXW10Q5XX13 1052 aa8.51□□□□□ -1.05
CTNND1-220ENST00000529526 FBXO33Q7Z6M2 555 aa8.51□□□□□ -1.05
CTNND1-220ENST00000529526 YAF2Q8IY57 180 aa8.51□□□□□ -1.05
CTNND1-220ENST00000529526 CCDC33Q8N5R6 958 aa8.51□□□□□ -1.05
CTNND1-220ENST00000529526 RUBCNQ92622 972 aa8.51□□□□□ -1.05
CTNND1-220ENST00000529526 ZIM3Q96PE6 472 aa8.51□□□□□ -1.05
CTNND1-220ENST00000529526 ADNPQ9H2P0 1102 aa8.51□□□□□ -1.05
CTNND1-220ENST00000529526 CHCHD3Q9NX63 227 aaKnown RBP8.51□□□□□ -1.05
CTNND1-220ENST00000529526 PXDNLA1KZ92 1463 aa8.51□□□□□ -1.05
CTNND1-220ENST00000529526 KLRC1P26715 233 aa8.51□□□□□ -1.05
CTNND1-220ENST00000529526 RFX5P48382 616 aaPredicted RBP8.51□□□□□ -1.05
CTNND1-220ENST00000529526 ZNF157P51786 506 aaPredicted RBP8.51□□□□□ -1.05
CTNND1-220ENST00000529526 CCDC85BQ15834 202 aaPredicted RBP8.51□□□□□ -1.05
CTNND1-220ENST00000529526 TKFCQ3LXA3 575 aa8.51□□□□□ -1.05
CTNND1-220ENST00000529526 ATG4CQ96DT6 458 aa8.51□□□□□ -1.05
CTNND1-220ENST00000529526 CCT8L2Q96SF2 557 aa8.51□□□□□ -1.05
CTNND1-220ENST00000529526 NT5C1AQ9BXI3 368 aa8.51□□□□□ -1.05
CTNND1-220ENST00000529526 OSBPL8Q9BZF1 889 aa8.51□□□□□ -1.05
CTNND1-220ENST00000529526 HPS4Q9NQG7 708 aa8.51□□□□□ -1.05
CTNND1-220ENST00000529526 KCND2Q9NZV8 630 aa8.51□□□□□ -1.05
CTNND1-220ENST00000529526 KLK14Q9P0G3 267 aa8.51□□□□□ -1.05
CTNND1-220ENST00000529526 WDR35Q9P2L0 1181 aa8.51□□□□□ -1.05
CTNND1-220ENST00000529526 GTPBP10A4D1E9 387 aaKnown RBP8.51□□□□□ -1.05
CTNND1-220ENST00000529526 RSPH10B2B2RC85 870 aa8.51□□□□□ -1.05
CTNND1-220ENST00000529526 CYBBP04839 570 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms