RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 RTL10Q7L3V2 364 aa8.51□□□□□ -1.05
SSBP3-211ENST00000528787 PPFIBP1Q86W92 1011 aa8.51□□□□□ -1.05
SSBP3-211ENST00000528787 UNC93AQ86WB7 457 aa8.51□□□□□ -1.05
SSBP3-211ENST00000528787 EFCAB13Q8IY85 973 aa8.51□□□□□ -1.05
SSBP3-211ENST00000528787 C1orf127Q8N9H9 656 aa8.51□□□□□ -1.05
SSBP3-211ENST00000528787 EHBP1Q8NDI1 1231 aa8.51□□□□□ -1.05
SSBP3-211ENST00000528787 NEK11Q8NG66 645 aa8.51□□□□□ -1.05
SSBP3-211ENST00000528787 EEF2KMTQ96G04 330 aa8.51□□□□□ -1.05
SSBP3-211ENST00000528787 IGSF21Q96ID5 467 aa8.51□□□□□ -1.05
SSBP3-211ENST00000528787 SUSD3Q96L08 255 aa8.51□□□□□ -1.05
SSBP3-211ENST00000528787 ZMAT2Q96NC0 199 aaKnown RBP8.51□□□□□ -1.05
SSBP3-211ENST00000528787 ERGIC2Q96RQ1 377 aa8.51□□□□□ -1.05
SSBP3-211ENST00000528787 MMS19Q96T76 1030 aa8.51□□□□□ -1.05
SSBP3-211ENST00000528787 EMILIN2Q9BXX0 1053 aa8.51□□□□□ -1.05
SSBP3-211ENST00000528787 TRIM5Q9C035 493 aa8.51□□□□□ -1.05
SSBP3-211ENST00000528787 VPS16Q9H269 839 aa8.51□□□□□ -1.05
SSBP3-211ENST00000528787 SNX25Q9H3E2 840 aa8.51□□□□□ -1.05
SSBP3-211ENST00000528787 CWH43Q9H720 699 aa8.51□□□□□ -1.05
SSBP3-211ENST00000528787 MMRN2Q9H8L6 949 aa8.51□□□□□ -1.05
SSBP3-211ENST00000528787 PLCB1Q9NQ66 1216 aa8.51□□□□□ -1.05
SSBP3-211ENST00000528787 MRPL17Q9NRX2 175 aaKnown RBP8.51□□□□□ -1.05
SSBP3-211ENST00000528787 RNF19AQ9NV58 838 aa8.51□□□□□ -1.05
SSBP3-211ENST00000528787 APEX2Q9UBZ4 518 aa8.51□□□□□ -1.05
SSBP3-211ENST00000528787 KIAA1257Q9ULG3 409 aa8.51□□□□□ -1.05
SSBP3-211ENST00000528787 MYO6Q9UM54 1294 aa8.51□□□□□ -1.05
SSBP3-211ENST00000528787 PCDHB8Q9UN66 801 aa8.51□□□□□ -1.05
SSBP3-211ENST00000528787 MRPL42Q9Y6G3 142 aaKnown RBP8.51□□□□□ -1.05
SSBP3-211ENST00000528787 ATP8B3O60423 1300 aa8.51□□□□□ -1.05
SSBP3-211ENST00000528787 LINC01553A4QN01 128 aa8.5□□□□□ -1.05
SSBP3-211ENST00000528787 CASTOR2A6NHX0 329 aa8.5□□□□□ -1.05
SSBP3-211ENST00000528787 OR6C75A6NL08 312 aa8.5□□□□□ -1.05
SSBP3-211ENST00000528787 M0QZQ0 153 aa8.5□□□□□ -1.05
SSBP3-211ENST00000528787 TACC1O75410 805 aa8.5□□□□□ -1.05
SSBP3-211ENST00000528787 FGF18O76093 207 aa8.5□□□□□ -1.05
SSBP3-211ENST00000528787 ASS1P00966 412 aaKnown RBP8.5□□□□□ -1.05
SSBP3-211ENST00000528787 SOD2P04179 222 aa8.5□□□□□ -1.05
SSBP3-211ENST00000528787 CA3P07451 260 aa8.5□□□□□ -1.05
SSBP3-211ENST00000528787 DNAJB2P25686 324 aa8.5□□□□□ -1.05
SSBP3-211ENST00000528787 GLUD2P49448 558 aa8.5□□□□□ -1.05
SSBP3-211ENST00000528787 AARSP49588 968 aaKnown RBP eCLIP8.5□□□□□ -1.059e-7■■■■■ 61.1
SSBP3-211ENST00000528787 MRE11P49959 708 aa8.5□□□□□ -1.05
SSBP3-211ENST00000528787 SLC8A3P57103 927 aa8.5□□□□□ -1.05
SSBP3-211ENST00000528787 SNX16P57768 344 aa8.5□□□□□ -1.05
SSBP3-211ENST00000528787 DLG4P78352 724 aa8.5□□□□□ -1.05
SSBP3-211ENST00000528787 TSPY1Q01534 308 aa8.5□□□□□ -1.05
SSBP3-211ENST00000528787 PPP3CAQ08209 521 aa8.5□□□□□ -1.05
SSBP3-211ENST00000528787 SMC1AQ14683 1233 aaKnown RBP8.5□□□□□ -1.05
SSBP3-211ENST00000528787 STILQ15468 1287 aa8.5□□□□□ -1.05
SSBP3-211ENST00000528787 NAB2Q15742 525 aa8.5□□□□□ -1.05
SSBP3-211ENST00000528787 TCTN1Q2MV58 587 aa8.5□□□□□ -1.05
SSBP3-211ENST00000528787 EPC2Q52LR7 807 aa8.5□□□□□ -1.05
SSBP3-211ENST00000528787 FIGNQ5HY92 759 aa8.5□□□□□ -1.05
SSBP3-211ENST00000528787 ZNF697Q5TEC3 545 aa8.5□□□□□ -1.05
SSBP3-211ENST00000528787 TDRD10Q5VZ19 366 aaKnown RBP8.5□□□□□ -1.05
SSBP3-211ENST00000528787 FAM109BQ6ICB4 259 aaPredicted RBP8.5□□□□□ -1.05
SSBP3-211ENST00000528787 PPP1R2P3Q6NXS1 205 aa8.5□□□□□ -1.05
SSBP3-211ENST00000528787 FUT10Q6P4F1 479 aa8.5□□□□□ -1.05
SSBP3-211ENST00000528787 TRIM65Q6PJ69 517 aa8.5□□□□□ -1.05
SSBP3-211ENST00000528787 CACNA2D4Q7Z3S7 1137 aa8.5□□□□□ -1.05
SSBP3-211ENST00000528787 IRF2BP1Q8IU81 584 aa8.5□□□□□ -1.05
SSBP3-211ENST00000528787 DCP1BQ8IZD4 617 aaKnown RBP8.5□□□□□ -1.05
SSBP3-211ENST00000528787 SLC39A11Q8N1S5 342 aa8.5□□□□□ -1.05
SSBP3-211ENST00000528787 RNF214Q8ND24 703 aa8.5□□□□□ -1.05
SSBP3-211ENST00000528787 C2orf15Q8WU43 125 aaKnown RBP8.5□□□□□ -1.05
SSBP3-211ENST00000528787 MRFAP1L1Q96HT8 127 aa8.5□□□□□ -1.05
SSBP3-211ENST00000528787 SPAG5Q96R06 1193 aa8.5□□□□□ -1.05
SSBP3-211ENST00000528787 CDCA3Q99618 268 aaPredicted RBP8.5□□□□□ -1.05
SSBP3-211ENST00000528787 TTPALQ9BTX7 342 aa8.5□□□□□ -1.05
SSBP3-211ENST00000528787 HERC2P3Q9BVR0 1158 aa8.5□□□□□ -1.05
SSBP3-211ENST00000528787 PBX4Q9BYU1 374 aa8.5□□□□□ -1.05
SSBP3-211ENST00000528787 IKZF4Q9H2S9 585 aa8.5□□□□□ -1.05
SSBP3-211ENST00000528787 PRO3102Q9H379 93 aa8.5□□□□□ -1.05
SSBP3-211ENST00000528787 RTN4Q9NQC3 1192 aaKnown RBP8.5□□□□□ -1.05
SSBP3-211ENST00000528787 TAB2Q9NYJ8 693 aa8.5□□□□□ -1.05
SSBP3-211ENST00000528787 EHD2Q9NZN4 543 aa8.5□□□□□ -1.05
SSBP3-211ENST00000528787 TUBGCP4Q9UGJ1 667 aa8.5□□□□□ -1.05
SSBP3-211ENST00000528787 PRG3Q9Y2Y8 225 aaPredicted RBP8.5□□□□□ -1.05
SSBP3-211ENST00000528787 SNX9Q9Y5X1 595 aa8.5□□□□□ -1.05
SSBP3-211ENST00000528787 ITIH6Q6UXX5 1313 aa8.5□□□□□ -1.05
SSBP3-211ENST00000528787 MEIS3P2A8K0S8 358 aa8.49□□□□□ -1.05
SSBP3-211ENST00000528787 H3BNC9 293 aa8.49□□□□□ -1.05
SSBP3-211ENST00000528787 CYB561D2O14569 222 aa8.49□□□□□ -1.05
SSBP3-211ENST00000528787 MED7O43513 233 aa8.49□□□□□ -1.05
SSBP3-211ENST00000528787 DDHD2O94830 711 aa8.49□□□□□ -1.05
SSBP3-211ENST00000528787 OAZ2O95190 189 aa8.49□□□□□ -1.05
SSBP3-211ENST00000528787 CYP11A1P05108 521 aa8.49□□□□□ -1.05
SSBP3-211ENST00000528787 ADH1AP07327 375 aa8.49□□□□□ -1.05
SSBP3-211ENST00000528787 SLC11A1P49279 550 aa8.49□□□□□ -1.05
SSBP3-211ENST00000528787 MYL6P60660 151 aa8.49□□□□□ -1.05
SSBP3-211ENST00000528787 SYCP1Q15431 976 aa8.49□□□□□ -1.05
SSBP3-211ENST00000528787 NFE2Q16621 373 aaPredicted RBP8.49□□□□□ -1.05
SSBP3-211ENST00000528787 TIGD5Q53EQ6 642 aa8.49□□□□□ -1.05
SSBP3-211ENST00000528787 MIIPQ5JXC2 388 aa8.49□□□□□ -1.05
SSBP3-211ENST00000528787 FAM171A1Q5VUB5 890 aa8.49□□□□□ -1.05
SSBP3-211ENST00000528787 SPECC1LQ69YQ0 1117 aa8.49□□□□□ -1.05
SSBP3-211ENST00000528787 OVOS1Q6IE37 1185 aa8.49□□□□□ -1.05
SSBP3-211ENST00000528787 C4orf50Q6ZRC1 276 aa8.49□□□□□ -1.05
SSBP3-211ENST00000528787 TMC7Q7Z402 723 aa8.49□□□□□ -1.05
SSBP3-211ENST00000528787 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.49□□□□□ -1.05
SSBP3-211ENST00000528787 VPS36Q86VN1 386 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms