RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 SORCS3Q9UPU3 1222 aa15.46■□□□□ 0.07
CAPN1-216ENST00000528739 HCN4Q9Y3Q4 1203 aa15.46■□□□□ 0.07
CAPN1-216ENST00000528739 CUL9Q8IWT3 2517 aa15.46■□□□□ 0.06
CAPN1-216ENST00000528739 PVALEFA0A1B0GWK0 134 aa15.45■□□□□ 0.06
CAPN1-216ENST00000528739 WDR27A2RRH5 827 aa15.45■□□□□ 0.06
CAPN1-216ENST00000528739 TMEM221A6NGB7 291 aa15.45■□□□□ 0.06
CAPN1-216ENST00000528739 ZNF233A6NK53 670 aa15.45■□□□□ 0.06
CAPN1-216ENST00000528739 M0QZQ0 153 aa15.45■□□□□ 0.06
CAPN1-216ENST00000528739 M0R296 226 aa15.45■□□□□ 0.06
CAPN1-216ENST00000528739 CYB561D2O14569 222 aa15.45■□□□□ 0.06
CAPN1-216ENST00000528739 CLIC2O15247 247 aa15.45■□□□□ 0.06
CAPN1-216ENST00000528739 EIF3DO15371 548 aaKnown RBP eCLIP15.45■□□□□ 0.06
CAPN1-216ENST00000528739 TMEM191BP0C7N4 346 aa15.45■□□□□ 0.06
CAPN1-216ENST00000528739 CYP2J2P51589 502 aa15.45■□□□□ 0.06
CAPN1-216ENST00000528739 NUCB2P80303 420 aa15.45■□□□□ 0.06
CAPN1-216ENST00000528739 POU5F1Q01860 360 aaKnown RBP15.45■□□□□ 0.06
CAPN1-216ENST00000528739 ADCY1Q08828 1119 aa15.45■□□□□ 0.06
CAPN1-216ENST00000528739 MRPL58Q14197 206 aaKnown RBP15.45■□□□□ 0.06
CAPN1-216ENST00000528739 OVOS1Q6IE37 1185 aa15.45■□□□□ 0.06
CAPN1-216ENST00000528739 SLC8B1Q6J4K2 584 aa15.45■□□□□ 0.06
CAPN1-216ENST00000528739 HS2ST1Q7LGA3 356 aa15.45■□□□□ 0.06
CAPN1-216ENST00000528739 BRSK2Q8IWQ3 736 aa15.45■□□□□ 0.06
CAPN1-216ENST00000528739 EFCAB13Q8IY85 973 aa15.45■□□□□ 0.06
CAPN1-216ENST00000528739 ELMOD1Q8N336 334 aa15.45■□□□□ 0.06
CAPN1-216ENST00000528739 CSGALNACT2Q8N6G5 542 aa15.45■□□□□ 0.06
CAPN1-216ENST00000528739 CCDC47Q96A33 483 aaKnown RBP15.45■□□□□ 0.06
CAPN1-216ENST00000528739 PGLYRP2Q96PD5 576 aa15.45■□□□□ 0.06
CAPN1-216ENST00000528739 PDE11AQ9HCR9 933 aa15.45■□□□□ 0.06
CAPN1-216ENST00000528739 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.45■□□□□ 0.06
CAPN1-216ENST00000528739 USP25Q9UHP3 1055 aa15.45■□□□□ 0.06
CAPN1-216ENST00000528739 AGAP1Q9UPQ3 857 aa15.45■□□□□ 0.06
CAPN1-216ENST00000528739 MUC3AQ02505 3323 aa15.45■□□□□ 0.06
CAPN1-216ENST00000528739 MYH15Q9Y2K3 1946 aa15.45■□□□□ 0.06
CAPN1-216ENST00000528739 CITO14578 2027 aa15.44■□□□□ 0.06
CAPN1-216ENST00000528739 TRIP11Q15643 1979 aa15.44■□□□□ 0.06
CAPN1-216ENST00000528739 PIRO00625 290 aa15.44■□□□□ 0.06
CAPN1-216ENST00000528739 KIAA0391O15091 583 aaKnown RBP15.44■□□□□ 0.06
CAPN1-216ENST00000528739 ACTN4O43707 911 aaKnown RBP15.44■□□□□ 0.06
CAPN1-216ENST00000528739 CLSTN1O94985 981 aa15.44■□□□□ 0.06
CAPN1-216ENST00000528739 ITGB3P05106 788 aa15.44■□□□□ 0.06
CAPN1-216ENST00000528739 OR4Q2P0C623 313 aa15.44■□□□□ 0.06
CAPN1-216ENST00000528739 ATF2P15336 505 aa15.44■□□□□ 0.06
CAPN1-216ENST00000528739 PAX3P23760 479 aa15.44■□□□□ 0.06
CAPN1-216ENST00000528739 NDUFA8P51970 172 aa15.44■□□□□ 0.06
CAPN1-216ENST00000528739 SIGLEC14Q08ET2 396 aa15.44■□□□□ 0.06
CAPN1-216ENST00000528739 SV2CQ496J9 727 aa15.44■□□□□ 0.06
CAPN1-216ENST00000528739 TPGS2Q68CL5 300 aa15.44■□□□□ 0.06
CAPN1-216ENST00000528739 CNNM4Q6P4Q7 775 aa15.44■□□□□ 0.06
CAPN1-216ENST00000528739 NT5DC4Q86YG4 428 aa15.44■□□□□ 0.06
CAPN1-216ENST00000528739 THEM5Q8N1Q8 247 aa15.44■□□□□ 0.06
CAPN1-216ENST00000528739 ST13P5Q8NFI4 369 aaPredicted RBP15.44■□□□□ 0.06
CAPN1-216ENST00000528739 ZNF507Q8TCN5 953 aa15.44■□□□□ 0.06
CAPN1-216ENST00000528739 ANKRD36BP1Q96IX9 119 aa15.44■□□□□ 0.06
CAPN1-216ENST00000528739 MFSD14AQ96MC6 490 aa15.44■□□□□ 0.06
CAPN1-216ENST00000528739 ZNF560Q96MR9 790 aa15.44■□□□□ 0.06
CAPN1-216ENST00000528739 MYADMQ96S97 322 aa15.44■□□□□ 0.06
CAPN1-216ENST00000528739 HCFC1R1Q9NWW0 138 aa15.44■□□□□ 0.06
CAPN1-216ENST00000528739 HSPBP1Q9NZL4 362 aa15.44■□□□□ 0.06
CAPN1-216ENST00000528739 PLXNA3P51805 1871 aa15.44■□□□□ 0.06
CAPN1-216ENST00000528739 OR6C75A6NL08 312 aa15.43■□□□□ 0.06
CAPN1-216ENST00000528739 SPTLC1O15269 473 aa15.43■□□□□ 0.06
CAPN1-216ENST00000528739 ABLIM3O94929 683 aa15.43■□□□□ 0.06
CAPN1-216ENST00000528739 TNNC2P02585 160 aa15.43■□□□□ 0.06
CAPN1-216ENST00000528739 POLR2BP30876 1174 aaKnown RBP15.43■□□□□ 0.06
CAPN1-216ENST00000528739 HOXA9P31269 272 aa15.43■□□□□ 0.06
CAPN1-216ENST00000528739 BFSP1Q12934 665 aa15.43■□□□□ 0.06
CAPN1-216ENST00000528739 SURF1Q15526 300 aa15.43■□□□□ 0.06
CAPN1-216ENST00000528739 KMT5BQ4FZB7 885 aa15.43■□□□□ 0.06
CAPN1-216ENST00000528739 PABPC1LQ4VXU2 614 aaKnown RBP15.43■□□□□ 0.06
CAPN1-216ENST00000528739 LMBRD2Q68DH5 695 aaPredicted RBP15.43■□□□□ 0.06
CAPN1-216ENST00000528739 IQCEQ6IPM2 695 aa15.43■□□□□ 0.06
CAPN1-216ENST00000528739 RNF19BQ6ZMZ0 732 aa15.43■□□□□ 0.06
CAPN1-216ENST00000528739 HFE2Q6ZVN8 426 aa15.43■□□□□ 0.06
CAPN1-216ENST00000528739 RTL10Q7L3V2 364 aa15.43■□□□□ 0.06
CAPN1-216ENST00000528739 SUGP1Q8IWZ8 645 aaKnown RBP15.43■□□□□ 0.06
CAPN1-216ENST00000528739 UBALD2Q8IYN6 164 aa15.43■□□□□ 0.06
CAPN1-216ENST00000528739 SCFD1Q8WVM8 642 aa15.43■□□□□ 0.06
CAPN1-216ENST00000528739 CCDC34Q96HJ3 373 aa15.43■□□□□ 0.06
CAPN1-216ENST00000528739 ZNF512Q96ME7 567 aaPredicted RBP15.43■□□□□ 0.06
CAPN1-216ENST00000528739 FNBP1Q96RU3 617 aa15.43■□□□□ 0.06
CAPN1-216ENST00000528739 CORO1BQ9BR76 489 aa15.43■□□□□ 0.06
CAPN1-216ENST00000528739 OXCT2Q9BYC2 517 aaPredicted RBP15.43■□□□□ 0.06
CAPN1-216ENST00000528739 RHOBTB2Q9BYZ6 727 aa15.43■□□□□ 0.06
CAPN1-216ENST00000528739 SMOC2Q9H3U7 446 aa15.43■□□□□ 0.06
CAPN1-216ENST00000528739 KCNK12Q9HB15 430 aa15.43■□□□□ 0.06
CAPN1-216ENST00000528739 KIAA1586Q9HCI6 787 aa15.43■□□□□ 0.06
CAPN1-216ENST00000528739 DNMT3BQ9UBC3 853 aaKnown RBP15.43■□□□□ 0.06
CAPN1-216ENST00000528739 AFF4Q9UHB7 1163 aaKnown RBP15.43■□□□□ 0.06
CAPN1-216ENST00000528739 DSEQ9UL01 958 aa15.43■□□□□ 0.06
CAPN1-216ENST00000528739 UBE4BO95155 1302 aa15.43■□□□□ 0.06
CAPN1-216ENST00000528739 C5orf42Q9H799 3197 aa15.42■□□□□ 0.06
CAPN1-216ENST00000528739 ANO9A1A5B4 782 aa15.42■□□□□ 0.06
CAPN1-216ENST00000528739 KPNA7A9QM74 516 aa15.42■□□□□ 0.06
CAPN1-216ENST00000528739 TBC1D4O60343 1298 aa15.42■□□□□ 0.06
CAPN1-216ENST00000528739 OAZ2O95190 189 aa15.42■□□□□ 0.06
CAPN1-216ENST00000528739 SEC24AO95486 1093 aa15.42■□□□□ 0.06
CAPN1-216ENST00000528739 DLATP10515 647 aaKnown RBP15.42■□□□□ 0.06
CAPN1-216ENST00000528739 PTPN2P17706 415 aa15.42■□□□□ 0.06
CAPN1-216ENST00000528739 TYMPP19971 482 aa15.42■□□□□ 0.06
CAPN1-216ENST00000528739 PNPLA4P41247 253 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms