RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.74■□□□□ 0.11
ECHDC1-220ENST00000528402 SEC14L1Q92503 715 aa15.74■□□□□ 0.11
ECHDC1-220ENST00000528402 AP1M1Q9BXS5 423 aa15.74■□□□□ 0.11
ECHDC1-220ENST00000528402 PARVAQ9NVD7 372 aa15.74■□□□□ 0.11
ECHDC1-220ENST00000528402 ANAPC7Q9UJX3 599 aa15.74■□□□□ 0.11
ECHDC1-220ENST00000528402 GNEQ9Y223 722 aaKnown RBP15.74■□□□□ 0.11
ECHDC1-220ENST00000528402 TMEM110-MUSTN1A8MSY1 372 aa15.73■□□□□ 0.11
ECHDC1-220ENST00000528402 LACTBL1A8MY62 500 aa15.73■□□□□ 0.11
ECHDC1-220ENST00000528402 PODXLO00592 558 aa15.73■□□□□ 0.11
ECHDC1-220ENST00000528402 ITGBL1O95965 494 aaPredicted RBP15.73■□□□□ 0.11
ECHDC1-220ENST00000528402 GJB1P08034 283 aa15.73■□□□□ 0.11
ECHDC1-220ENST00000528402 IQCF3P0C7M6 154 aa15.73■□□□□ 0.11
ECHDC1-220ENST00000528402 MYBL2P10244 700 aa15.73■□□□□ 0.11
ECHDC1-220ENST00000528402 ARF4P18085 180 aaPredicted RBP15.73■□□□□ 0.11
ECHDC1-220ENST00000528402 RRM1P23921 792 aa15.73■□□□□ 0.11
ECHDC1-220ENST00000528402 RGS2P41220 211 aa15.73■□□□□ 0.11
ECHDC1-220ENST00000528402 CPT1AP50416 773 aa15.73■□□□□ 0.11
ECHDC1-220ENST00000528402 ZNF157P51786 506 aaPredicted RBP15.73■□□□□ 0.11
ECHDC1-220ENST00000528402 TERF2Q15554 542 aa15.73■□□□□ 0.11
ECHDC1-220ENST00000528402 TAF1CQ15572 869 aaPredicted RBP15.73■□□□□ 0.11
ECHDC1-220ENST00000528402 MARCH8Q5T0T0 291 aa15.73■□□□□ 0.11
ECHDC1-220ENST00000528402 DCAF12L1Q5VU92 463 aa15.73■□□□□ 0.11
ECHDC1-220ENST00000528402 RASAL3Q86YV0 1011 aa15.73■□□□□ 0.11
ECHDC1-220ENST00000528402 SOCS4Q8WXH5 440 aa15.73■□□□□ 0.11
ECHDC1-220ENST00000528402 CPA5Q8WXQ8 436 aa15.73■□□□□ 0.11
ECHDC1-220ENST00000528402 ALG3Q92685 438 aa15.73■□□□□ 0.11
ECHDC1-220ENST00000528402 CCDC102AQ96A19 550 aa15.73■□□□□ 0.11
ECHDC1-220ENST00000528402 LRRC45Q96CN5 670 aa15.73■□□□□ 0.11
ECHDC1-220ENST00000528402 SCLT1Q96NL6 688 aa15.73■□□□□ 0.11
ECHDC1-220ENST00000528402 ACAP3Q96P50 834 aa15.73■□□□□ 0.11
ECHDC1-220ENST00000528402 BCO2Q9BYV7 579 aa15.73■□□□□ 0.11
ECHDC1-220ENST00000528402 XYLT2Q9H1B5 865 aa15.73■□□□□ 0.11
ECHDC1-220ENST00000528402 LHX5Q9H2C1 402 aa15.73■□□□□ 0.11
ECHDC1-220ENST00000528402 ITGA11Q9UKX5 1188 aa15.73■□□□□ 0.11
ECHDC1-220ENST00000528402 DYNC1LI2O43237 492 aaPredicted RBP15.72■□□□□ 0.11
ECHDC1-220ENST00000528402 HSF2BPO75031 334 aa15.72■□□□□ 0.11
ECHDC1-220ENST00000528402 PHF2O75151 1096 aa15.72■□□□□ 0.11
ECHDC1-220ENST00000528402 PROSCO94903 275 aa15.72■□□□□ 0.11
ECHDC1-220ENST00000528402 F2P00734 622 aa15.72■□□□□ 0.11
ECHDC1-220ENST00000528402 CXCL8P10145 99 aa15.72■□□□□ 0.11
ECHDC1-220ENST00000528402 MMP8P22894 467 aa15.72■□□□□ 0.11
ECHDC1-220ENST00000528402 POLR2BP30876 1174 aaKnown RBP15.72■□□□□ 0.11
ECHDC1-220ENST00000528402 CETN2P41208 172 aa15.72■□□□□ 0.11
ECHDC1-220ENST00000528402 GRM5P41594 1212 aa15.72■□□□□ 0.11
ECHDC1-220ENST00000528402 RBP5P82980 135 aa15.72■□□□□ 0.11
ECHDC1-220ENST00000528402 C17orf99Q6UX52 265 aa15.72■□□□□ 0.11
ECHDC1-220ENST00000528402 CASKIN2Q8WXE0 1202 aa15.72■□□□□ 0.11
ECHDC1-220ENST00000528402 IFT81Q8WYA0 676 aa15.72■□□□□ 0.11
ECHDC1-220ENST00000528402 USP6NLQ92738 828 aa15.72■□□□□ 0.11
ECHDC1-220ENST00000528402 KATNAL1Q9BW62 490 aa15.72■□□□□ 0.11
ECHDC1-220ENST00000528402 FAM129AQ9BZQ8 928 aa15.72■□□□□ 0.11
ECHDC1-220ENST00000528402 ZFYVE28Q9HCC9 887 aa15.72■□□□□ 0.11
ECHDC1-220ENST00000528402 HOMER3Q9NSC5 361 aa15.72■□□□□ 0.11
ECHDC1-220ENST00000528402 PCYOX1Q9UHG3 505 aa15.72■□□□□ 0.11
ECHDC1-220ENST00000528402 IP6K2Q9UHH9 426 aa15.72■□□□□ 0.11
ECHDC1-220ENST00000528402 FEZ2Q9UHY8 353 aaPredicted RBP15.72■□□□□ 0.11
ECHDC1-220ENST00000528402 CPA4Q9UI42 421 aa15.72■□□□□ 0.11
ECHDC1-220ENST00000528402 KIAA1257Q9ULG3 409 aa15.72■□□□□ 0.11
ECHDC1-220ENST00000528402 STRIP2Q9ULQ0 834 aa15.72■□□□□ 0.11
ECHDC1-220ENST00000528402 UMODL1Q5DID0 1318 aa15.71■□□□□ 0.11
ECHDC1-220ENST00000528402 MROH7Q68CQ1 1323 aa15.71■□□□□ 0.11
ECHDC1-220ENST00000528402 MBLAC1A4D2B0 266 aaPredicted RBP15.71■□□□□ 0.11
ECHDC1-220ENST00000528402 GOLGA6BA6NDN3 693 aa15.71■□□□□ 0.11
ECHDC1-220ENST00000528402 PSTPIP1O43586 416 aa15.71■□□□□ 0.11
ECHDC1-220ENST00000528402 TSPAN1O60635 241 aa15.71■□□□□ 0.11
ECHDC1-220ENST00000528402 KPNA6O60684 536 aa15.71■□□□□ 0.11
ECHDC1-220ENST00000528402 VTNP04004 478 aa15.71■□□□□ 0.11
ECHDC1-220ENST00000528402 ASPAP45381 313 aa15.71■□□□□ 0.11
ECHDC1-220ENST00000528402 CARSP49589 748 aaKnown RBP15.71■□□□□ 0.11
ECHDC1-220ENST00000528402 MAMLD1Q13495 774 aa15.71■□□□□ 0.11
ECHDC1-220ENST00000528402 TMEM132DQ14C87 1099 aa15.71■□□□□ 0.11
ECHDC1-220ENST00000528402 CYP1B1Q16678 543 aa15.71■□□□□ 0.11
ECHDC1-220ENST00000528402 PTPROQ16827 1216 aa15.71■□□□□ 0.11
ECHDC1-220ENST00000528402 SPDYCQ5MJ68 293 aa15.71■□□□□ 0.11
ECHDC1-220ENST00000528402 RGMBQ6NW40 437 aa15.71■□□□□ 0.11
ECHDC1-220ENST00000528402 SLC13A5Q86YT5 568 aaPredicted RBP15.71■□□□□ 0.11
ECHDC1-220ENST00000528402 NME8Q8N427 588 aa15.71■□□□□ 0.11
ECHDC1-220ENST00000528402 FEZF2Q8TBJ5 459 aa15.71■□□□□ 0.11
ECHDC1-220ENST00000528402 KRT35Q92764 455 aa15.71■□□□□ 0.11
ECHDC1-220ENST00000528402 AP5M1Q9H0R1 490 aa15.71■□□□□ 0.11
ECHDC1-220ENST00000528402 DDX47Q9H0S4 455 aaKnown RBP15.71■□□□□ 0.11
ECHDC1-220ENST00000528402 ADAMTS10Q9H324 1103 aa15.71■□□□□ 0.11
ECHDC1-220ENST00000528402 NFU1Q9UMS0 254 aa15.71■□□□□ 0.11
ECHDC1-220ENST00000528402 FSCN2O14926 492 aa15.7■□□□□ 0.1
ECHDC1-220ENST00000528402 ATMINO43313 823 aaPredicted RBP15.7■□□□□ 0.1
ECHDC1-220ENST00000528402 KRT19P08727 400 aa15.7■□□□□ 0.1
ECHDC1-220ENST00000528402 ZNF865P0CJ78 1059 aaPredicted RBP15.7■□□□□ 0.1
ECHDC1-220ENST00000528402 GNAT1P11488 350 aa15.7■□□□□ 0.1
ECHDC1-220ENST00000528402 ITGA4P13612 1032 aa15.7■□□□□ 0.1
ECHDC1-220ENST00000528402 FNTAP49354 379 aa15.7■□□□□ 0.1
ECHDC1-220ENST00000528402 OSTNP61366 133 aa15.7■□□□□ 0.1
ECHDC1-220ENST00000528402 LACTBP83111 547 aaPredicted RBP15.7■□□□□ 0.1
ECHDC1-220ENST00000528402 DR1Q01658 176 aa15.7■□□□□ 0.1
ECHDC1-220ENST00000528402 SLC10A6Q3KNW5 377 aa15.7■□□□□ 0.1
ECHDC1-220ENST00000528402 RHOT1Q8IXI2 618 aa15.7■□□□□ 0.1
ECHDC1-220ENST00000528402 C1orf127Q8N9H9 656 aa15.7■□□□□ 0.1
ECHDC1-220ENST00000528402 C12orf50Q8NA57 414 aaPredicted RBP15.7■□□□□ 0.1
ECHDC1-220ENST00000528402 ELMO3Q96BJ8 720 aa15.7■□□□□ 0.1
ECHDC1-220ENST00000528402 FAM84AQ96KN4 292 aa15.7■□□□□ 0.1
ECHDC1-220ENST00000528402 RUFY1Q96T51 708 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms