RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 SRGAP2CP0DJJ0 459 aa7.91□□□□□ -1.14
C11orf54-207ENST00000528288 ACO1P21399 889 aaKnown RBP7.91□□□□□ -1.14
C11orf54-207ENST00000528288 GTF2H1P32780 548 aa7.91□□□□□ -1.14
C11orf54-207ENST00000528288 CUL2Q13617 745 aa7.91□□□□□ -1.14
C11orf54-207ENST00000528288 SNCBQ16143 134 aa7.91□□□□□ -1.14
C11orf54-207ENST00000528288 MIS18BP1Q6P0N0 1132 aa7.91□□□□□ -1.14
C11orf54-207ENST00000528288 RHBDF2Q6PJF5 856 aa7.91□□□□□ -1.14
C11orf54-207ENST00000528288 TAOK1Q7L7X3 1001 aa7.91□□□□□ -1.14
C11orf54-207ENST00000528288 DEFB132Q7Z7B7 95 aa7.91□□□□□ -1.14
C11orf54-207ENST00000528288 MICALL2Q8IY33 904 aa7.91□□□□□ -1.14
C11orf54-207ENST00000528288 ATL2Q8NHH9 583 aa7.91□□□□□ -1.14
C11orf54-207ENST00000528288 LPAR1Q92633 364 aa7.91□□□□□ -1.14
C11orf54-207ENST00000528288 RBM15Q96T37 977 aaKnown RBP eCLIP7.91□□□□□ -1.14
C11orf54-207ENST00000528288 STK32BQ9NY57 414 aa7.91□□□□□ -1.14
C11orf54-207ENST00000528288 ATXN2Q99700 1313 aaKnown RBP7.91□□□□□ -1.14
C11orf54-207ENST00000528288 EXTL3O43909 919 aa7.91□□□□□ -1.14
C11orf54-207ENST00000528288 KRT1P04264 644 aa7.91□□□□□ -1.14
C11orf54-207ENST00000528288 ITIH2P19823 946 aa7.91□□□□□ -1.14
C11orf54-207ENST00000528288 STX2P32856 288 aa7.91□□□□□ -1.14
C11orf54-207ENST00000528288 RDXP35241 583 aaKnown RBP7.91□□□□□ -1.14
C11orf54-207ENST00000528288 NOMO3P69849 1222 aa7.91□□□□□ -1.14
C11orf54-207ENST00000528288 OGDHQ02218 1023 aa7.91□□□□□ -1.14
C11orf54-207ENST00000528288 ZACNQ401N2 412 aa7.91□□□□□ -1.14
C11orf54-207ENST00000528288 TRIM50Q86XT4 487 aa7.91□□□□□ -1.14
C11orf54-207ENST00000528288 SAMD3Q8N6K7 520 aa7.91□□□□□ -1.14
C11orf54-207ENST00000528288 CCDC63Q8NA47 563 aa7.91□□□□□ -1.14
C11orf54-207ENST00000528288 LRRN4Q8WUT4 740 aa7.91□□□□□ -1.14
C11orf54-207ENST00000528288 RMDN2Q96LZ7 410 aa7.91□□□□□ -1.14
C11orf54-207ENST00000528288 TMEM121Q9BTD3 319 aa7.91□□□□□ -1.14
C11orf54-207ENST00000528288 ZWILCHQ9H900 591 aa7.91□□□□□ -1.14
C11orf54-207ENST00000528288 ACTR5Q9H9F9 607 aaPredicted RBP7.91□□□□□ -1.14
C11orf54-207ENST00000528288 WHRNQ9P202 907 aa7.91□□□□□ -1.14
C11orf54-207ENST00000528288 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.91□□□□□ -1.14
C11orf54-207ENST00000528288 WDR91A4D1P6 747 aa7.9□□□□□ -1.14
C11orf54-207ENST00000528288 SNX3O60493 162 aa7.9□□□□□ -1.14
C11orf54-207ENST00000528288 DGAT1O75907 488 aa7.9□□□□□ -1.14
C11orf54-207ENST00000528288 RAP1GAPP47736 663 aa7.9□□□□□ -1.14
C11orf54-207ENST00000528288 ELF3P78545 371 aaPredicted RBP7.9□□□□□ -1.14
C11orf54-207ENST00000528288 GCNT1Q02742 428 aa7.9□□□□□ -1.14
C11orf54-207ENST00000528288 GPS1Q13098 491 aa7.9□□□□□ -1.14
C11orf54-207ENST00000528288 TRMT10CQ7L0Y3 403 aaKnown RBP7.9□□□□□ -1.14
C11orf54-207ENST00000528288 LRRC71Q8N4P6 559 aa7.9□□□□□ -1.14
C11orf54-207ENST00000528288 MORC4Q8TE76 937 aa7.9□□□□□ -1.14
C11orf54-207ENST00000528288 NSUN6Q8TEA1 469 aaKnown RBP7.9□□□□□ -1.14
C11orf54-207ENST00000528288 JDP2Q8WYK2 163 aa7.9□□□□□ -1.14
C11orf54-207ENST00000528288 CENPTQ96BT3 561 aa7.9□□□□□ -1.14
C11orf54-207ENST00000528288 RUNDC3BQ96NL0 473 aa7.9□□□□□ -1.14
C11orf54-207ENST00000528288 TGS1Q96RS0 853 aaKnown RBP7.9□□□□□ -1.14
C11orf54-207ENST00000528288 KLF6Q99612 283 aaPredicted RBP7.9□□□□□ -1.14
C11orf54-207ENST00000528288 PLVAPQ9BX97 442 aa7.9□□□□□ -1.14
C11orf54-207ENST00000528288 MTMR12Q9C0I1 747 aa7.9□□□□□ -1.14
C11orf54-207ENST00000528288 VPS37BQ9H9H4 285 aa7.9□□□□□ -1.14
C11orf54-207ENST00000528288 LOC102724159A0A0B4J2E5 919 aa7.9□□□□□ -1.14
C11orf54-207ENST00000528288 RASA4BC9J798 803 aa7.9□□□□□ -1.14
C11orf54-207ENST00000528288 MAPK13O15264 365 aa7.9□□□□□ -1.14
C11orf54-207ENST00000528288 RASA4O43374 803 aa7.9□□□□□ -1.14
C11orf54-207ENST00000528288 FOXN2P32314 431 aa7.9□□□□□ -1.14
C11orf54-207ENST00000528288 ARSEP51690 589 aa7.9□□□□□ -1.14
C11orf54-207ENST00000528288 MYL6P60660 151 aa7.9□□□□□ -1.14
C11orf54-207ENST00000528288 PTK6Q13882 451 aa7.9□□□□□ -1.14
C11orf54-207ENST00000528288 EFTUD2Q15029 972 aaKnown RBP eCLIP7.9□□□□□ -1.141e-8■■■■□ 20.3
C11orf54-207ENST00000528288 TCEAL1Q15170 157 aa7.9□□□□□ -1.14
C11orf54-207ENST00000528288 PWP2Q15269 919 aaKnown RBP7.9□□□□□ -1.14
C11orf54-207ENST00000528288 CLUL1Q15846 466 aa7.9□□□□□ -1.14
C11orf54-207ENST00000528288 ACCSLQ4AC99 568 aa7.9□□□□□ -1.14
C11orf54-207ENST00000528288 LIN9Q5TKA1 542 aa7.9□□□□□ -1.14
C11orf54-207ENST00000528288 ABRAQ8N0Z2 381 aa7.9□□□□□ -1.14
C11orf54-207ENST00000528288 C12orf50Q8NA57 414 aaPredicted RBP7.9□□□□□ -1.14
C11orf54-207ENST00000528288 SGSM3Q96HU1 749 aa7.9□□□□□ -1.14
C11orf54-207ENST00000528288 NTPCRQ9BSD7 190 aaKnown RBP7.9□□□□□ -1.14
C11orf54-207ENST00000528288 ECT2Q9H8V3 914 aa7.9□□□□□ -1.14
C11orf54-207ENST00000528288 ALG13Q9NP73 1137 aaKnown RBP7.9□□□□□ -1.14
C11orf54-207ENST00000528288 SLCO1B3Q9NPD5 702 aa7.9□□□□□ -1.14
C11orf54-207ENST00000528288 HOMER3Q9NSC5 361 aa7.9□□□□□ -1.14
C11orf54-207ENST00000528288 ARHGAP28Q9P2N2 729 aa7.9□□□□□ -1.14
C11orf54-207ENST00000528288 NXF1Q9UBU9 619 aaKnown RBP7.9□□□□□ -1.14
C11orf54-207ENST00000528288 LRRD1A4D1F6 860 aa7.9□□□□□ -1.15
C11orf54-207ENST00000528288 EIF4E1BA6NMX2 242 aaKnown RBP7.9□□□□□ -1.15
C11orf54-207ENST00000528288 SRRM3A6NNA2 597 aaPredicted RBP7.9□□□□□ -1.15
C11orf54-207ENST00000528288 ITGBL1O95965 494 aaPredicted RBP7.9□□□□□ -1.15
C11orf54-207ENST00000528288 CYP1A1P04798 512 aaPredicted RBP7.9□□□□□ -1.15
C11orf54-207ENST00000528288 GMPSP49915 693 aaPredicted RBP7.9□□□□□ -1.15
C11orf54-207ENST00000528288 BACE1P56817 501 aa7.9□□□□□ -1.15
C11orf54-207ENST00000528288 NFX1Q12986 1120 aaKnown RBP7.9□□□□□ -1.15
C11orf54-207ENST00000528288 NCOA4Q13772 614 aa7.9□□□□□ -1.15
C11orf54-207ENST00000528288 DCUN1D2Q6PH85 259 aa7.9□□□□□ -1.15
C11orf54-207ENST00000528288 ABHD15Q6UXT9 468 aa7.9□□□□□ -1.15
C11orf54-207ENST00000528288 C15orf39Q6ZRI6 1047 aa7.9□□□□□ -1.15
C11orf54-207ENST00000528288 RHOT1Q8IXI2 618 aa7.9□□□□□ -1.15
C11orf54-207ENST00000528288 ZNF606Q8WXB4 792 aa7.9□□□□□ -1.15
C11orf54-207ENST00000528288 CNKSR2Q8WXI2 1034 aa7.9□□□□□ -1.15
C11orf54-207ENST00000528288 VTI1AQ96AJ9 217 aa7.9□□□□□ -1.15
C11orf54-207ENST00000528288 LBHD1Q9BQE6 289 aaPredicted RBP7.9□□□□□ -1.15
C11orf54-207ENST00000528288 KDM4CQ9H3R0 1056 aa7.9□□□□□ -1.15
C11orf54-207ENST00000528288 PDLIM7Q9NR12 457 aa7.9□□□□□ -1.15
C11orf54-207ENST00000528288 CYP39A1Q9NYL5 469 aa7.9□□□□□ -1.15
C11orf54-207ENST00000528288 GGA2Q9UJY4 613 aa7.9□□□□□ -1.15
C11orf54-207ENST00000528288 GOLGA8RI6L899 631 aa7.89□□□□□ -1.15
C11orf54-207ENST00000528288 ASAP2O43150 1006 aa7.89□□□□□ -1.15
C11orf54-207ENST00000528288 ZBTB7AO95365 584 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms