RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 DTWD2Q8NBA8 298 aa12.53□□□□□ -0.4
CCDC90B-210ENST00000528149 XXYLT1Q8NBI6 393 aa12.53□□□□□ -0.4
CCDC90B-210ENST00000528149 FAM212AQ96EL1 285 aa12.53□□□□□ -0.4
CCDC90B-210ENST00000528149 ZMAT2Q96NC0 199 aaKnown RBP12.53□□□□□ -0.4
CCDC90B-210ENST00000528149 ZNF558Q96NG5 402 aa12.53□□□□□ -0.4
CCDC90B-210ENST00000528149 ACAP3Q96P50 834 aa12.53□□□□□ -0.4
CCDC90B-210ENST00000528149 RPS6KC1Q96S38 1066 aa12.53□□□□□ -0.4
CCDC90B-210ENST00000528149 CDCA3Q99618 268 aaPredicted RBP12.53□□□□□ -0.4
CCDC90B-210ENST00000528149 DNAJC25Q9H1X3 360 aa12.53□□□□□ -0.4
CCDC90B-210ENST00000528149 RPF1Q9H9Y2 349 aaKnown RBP12.53□□□□□ -0.4
CCDC90B-210ENST00000528149 ANO10Q9NW15 660 aa12.53□□□□□ -0.4
CCDC90B-210ENST00000528149 CPSF3Q9UKF6 684 aaKnown RBP12.53□□□□□ -0.4
CCDC90B-210ENST00000528149 TRAF3IP3Q9Y228 551 aa12.53□□□□□ -0.4
CCDC90B-210ENST00000528149 NRP1O14786 923 aa12.52□□□□□ -0.41
CCDC90B-210ENST00000528149 HOXA2O43364 376 aa12.52□□□□□ -0.41
CCDC90B-210ENST00000528149 EXOC3O60645 756 aa12.52□□□□□ -0.41
CCDC90B-210ENST00000528149 LETM1O95202 739 aaPredicted RBP12.52□□□□□ -0.41
CCDC90B-210ENST00000528149 NPR3P17342 541 aa12.52□□□□□ -0.41
CCDC90B-210ENST00000528149 LAG3P18627 525 aa12.52□□□□□ -0.41
CCDC90B-210ENST00000528149 YARSP54577 528 aaKnown RBP12.52□□□□□ -0.41
CCDC90B-210ENST00000528149 LRRC63Q05C16 580 aa12.52□□□□□ -0.41
CCDC90B-210ENST00000528149 PPP2R3AQ06190 1150 aa12.52□□□□□ -0.41
CCDC90B-210ENST00000528149 DSC1Q08554 894 aa12.52□□□□□ -0.41
CCDC90B-210ENST00000528149 KCNC3Q14003 757 aa12.52□□□□□ -0.41
CCDC90B-210ENST00000528149 NFIL3Q16649 462 aa12.52□□□□□ -0.41
CCDC90B-210ENST00000528149 EDRF1Q3B7T1 1238 aa12.52□□□□□ -0.41
CCDC90B-210ENST00000528149 SLC10A6Q3KNW5 377 aa12.52□□□□□ -0.41
CCDC90B-210ENST00000528149 ANO6Q4KMQ2 910 aa12.52□□□□□ -0.41
CCDC90B-210ENST00000528149 BRSK2Q8IWQ3 736 aa12.52□□□□□ -0.41
CCDC90B-210ENST00000528149 COLGALT2Q8IYK4 626 aa12.52□□□□□ -0.41
CCDC90B-210ENST00000528149 DCLK2Q8N568 766 aa12.52□□□□□ -0.41
CCDC90B-210ENST00000528149 RDH13Q8NBN7 331 aa12.52□□□□□ -0.41
CCDC90B-210ENST00000528149 MICAL1Q8TDZ2 1067 aa12.52□□□□□ -0.41
CCDC90B-210ENST00000528149 C18orf25Q96B23 403 aaPredicted RBP12.52□□□□□ -0.41
CCDC90B-210ENST00000528149 MED15Q96RN5 788 aa12.52□□□□□ -0.41
CCDC90B-210ENST00000528149 DUSP9Q99956 384 aaKnown RBP12.52□□□□□ -0.41
CCDC90B-210ENST00000528149 FUCA2Q9BTY2 467 aa12.52□□□□□ -0.41
CCDC90B-210ENST00000528149 SEMA4AQ9H3S1 761 aa12.52□□□□□ -0.41
CCDC90B-210ENST00000528149 POMKQ9H5K3 350 aa12.52□□□□□ -0.41
CCDC90B-210ENST00000528149 DMAC2Q9NW81 257 aa12.52□□□□□ -0.41
CCDC90B-210ENST00000528149 RBAKQ9NYW8 714 aaPredicted RBP12.52□□□□□ -0.41
CCDC90B-210ENST00000528149 DACH1Q9UI36 760 aa12.52□□□□□ -0.41
CCDC90B-210ENST00000528149 GIT1Q9Y2X7 761 aa12.52□□□□□ -0.41
CCDC90B-210ENST00000528149 TSC2P49815 1807 aa12.52□□□□□ -0.41
CCDC90B-210ENST00000528149 VWA8A3KMH1 1905 aa12.52□□□□□ -0.41
CCDC90B-210ENST00000528149 TTC26A0AVF1 554 aa12.51□□□□□ -0.41
CCDC90B-210ENST00000528149 BICDL2A1A5D9 508 aa12.51□□□□□ -0.41
CCDC90B-210ENST00000528149 FSD2A1L4K1 749 aa12.51□□□□□ -0.41
CCDC90B-210ENST00000528149 LACTBL1A8MY62 500 aa12.51□□□□□ -0.41
CCDC90B-210ENST00000528149 I3L4J1 428 aa12.51□□□□□ -0.41
CCDC90B-210ENST00000528149 FSCN2O14926 492 aa12.51□□□□□ -0.41
CCDC90B-210ENST00000528149 KIAA0391O15091 583 aaKnown RBP12.51□□□□□ -0.41
CCDC90B-210ENST00000528149 INPPL1O15357 1258 aa12.51□□□□□ -0.41
CCDC90B-210ENST00000528149 LDHAP00338 332 aaKnown RBP12.51□□□□□ -0.41
CCDC90B-210ENST00000528149 NFICP08651 508 aa12.51□□□□□ -0.41
CCDC90B-210ENST00000528149 SRGAP2BP0DMP2 458 aa12.51□□□□□ -0.41
CCDC90B-210ENST00000528149 CCDC192P0DO97 292 aa12.51□□□□□ -0.41
CCDC90B-210ENST00000528149 OR1G1P47890 313 aa12.51□□□□□ -0.41
CCDC90B-210ENST00000528149 RNASELQ05823 741 aaKnown RBP12.51□□□□□ -0.41
CCDC90B-210ENST00000528149 CYP24A1Q07973 514 aa12.51□□□□□ -0.41
CCDC90B-210ENST00000528149 SNRNP35Q16560 246 aaKnown RBP12.51□□□□□ -0.41
CCDC90B-210ENST00000528149 KYAT1Q16773 422 aa12.51□□□□□ -0.41
CCDC90B-210ENST00000528149 LLGL2Q6P1M3 1020 aa12.51□□□□□ -0.41
CCDC90B-210ENST00000528149 TMEM184AQ6ZMB5 413 aa12.51□□□□□ -0.41
CCDC90B-210ENST00000528149 SLC9A9Q8IVB4 645 aa12.51□□□□□ -0.41
CCDC90B-210ENST00000528149 ZC3H3Q8IXZ2 948 aaKnown RBP12.51□□□□□ -0.41
CCDC90B-210ENST00000528149 C3orf58Q8NDZ4 430 aa12.51□□□□□ -0.41
CCDC90B-210ENST00000528149 URGCPQ8TCY9 931 aa12.51□□□□□ -0.41
CCDC90B-210ENST00000528149 TOPORSQ9NS56 1045 aaPredicted RBP12.51□□□□□ -0.41
CCDC90B-210ENST00000528149 RWDD2AQ9UIY3 292 aa12.51□□□□□ -0.41
CCDC90B-210ENST00000528149 FANCMQ8IYD8 2048 aa12.5□□□□□ -0.41
CCDC90B-210ENST00000528149 ZNF233A6NK53 670 aa12.5□□□□□ -0.41
CCDC90B-210ENST00000528149 PPEF2O14830 753 aa12.5□□□□□ -0.41
CCDC90B-210ENST00000528149 AKAP3O75969 853 aa12.5□□□□□ -0.41
CCDC90B-210ENST00000528149 KIF4AO95239 1232 aa12.5□□□□□ -0.41
CCDC90B-210ENST00000528149 GRIK3Q13003 919 aa12.5□□□□□ -0.41
CCDC90B-210ENST00000528149 ADAM9Q13443 819 aa12.5□□□□□ -0.41
CCDC90B-210ENST00000528149 LMBRD2Q68DH5 695 aaPredicted RBP12.5□□□□□ -0.41
CCDC90B-210ENST00000528149 JADE1Q6IE81 842 aa12.5□□□□□ -0.41
CCDC90B-210ENST00000528149 CD300LGQ6UXG3 332 aa12.5□□□□□ -0.41
CCDC90B-210ENST00000528149 EFCAB13Q8IY85 973 aa12.5□□□□□ -0.41
CCDC90B-210ENST00000528149 CSGALNACT2Q8N6G5 542 aa12.5□□□□□ -0.41
CCDC90B-210ENST00000528149 RUBCNQ92622 972 aa12.5□□□□□ -0.41
CCDC90B-210ENST00000528149 IGSF21Q96ID5 467 aa12.5□□□□□ -0.41
CCDC90B-210ENST00000528149 TCF25Q9BQ70 676 aa12.5□□□□□ -0.41
CCDC90B-210ENST00000528149 GPR62Q9BZJ7 368 aa12.5□□□□□ -0.41
CCDC90B-210ENST00000528149 PDE11AQ9HCR9 933 aa12.5□□□□□ -0.41
CCDC90B-210ENST00000528149 UBN1Q9NPG3 1134 aa12.5□□□□□ -0.41
CCDC90B-210ENST00000528149 SPG21Q9NZD8 308 aa12.5□□□□□ -0.41
CCDC90B-210ENST00000528149 CNTN3Q9P232 1028 aa12.5□□□□□ -0.41
CCDC90B-210ENST00000528149 TUBGCP4Q9UGJ1 667 aa12.5□□□□□ -0.41
CCDC90B-210ENST00000528149 FRMD4BQ9Y2L6 1034 aa12.5□□□□□ -0.41
CCDC90B-210ENST00000528149 PCDHB12Q9Y5F1 795 aa12.5□□□□□ -0.41
CCDC90B-210ENST00000528149 ZFYVE26Q68DK2 2539 aa12.5□□□□□ -0.41
CCDC90B-210ENST00000528149 PTPRJQ12913 1337 aa12.49□□□□□ -0.41
CCDC90B-210ENST00000528149 C2CD2LO14523 706 aa12.49□□□□□ -0.41
CCDC90B-210ENST00000528149 CETN3O15182 167 aa12.49□□□□□ -0.41
CCDC90B-210ENST00000528149 IL18RAPO95256 599 aa12.49□□□□□ -0.41
CCDC90B-210ENST00000528149 EPB41P11171 864 aaKnown RBP12.49□□□□□ -0.41
CCDC90B-210ENST00000528149 RPL13P26373 211 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms