RNA–Protein interactions for RNA: ENST00000527949.1

NR1H3-230, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2 BASIC

Gene NR1H3, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-230ENST00000527949 HTR4Q13639 388 aa12.09□□□□□ -0.47
NR1H3-230ENST00000527949 RSPO4Q2I0M5 234 aaPredicted RBP12.09□□□□□ -0.47
NR1H3-230ENST00000527949 PPM1LQ5SGD2 360 aa12.09□□□□□ -0.47
NR1H3-230ENST00000527949 VARS2Q5ST30 1063 aaKnown RBP12.09□□□□□ -0.47
NR1H3-230ENST00000527949 SPATA1Q5VX52 437 aa12.09□□□□□ -0.47
NR1H3-230ENST00000527949 SLC39A4Q6P5W5 647 aa12.09□□□□□ -0.47
NR1H3-230ENST00000527949 NT5DC4Q86YG4 428 aa12.09□□□□□ -0.47
NR1H3-230ENST00000527949 HSCBQ8IWL3 235 aa12.09□□□□□ -0.47
NR1H3-230ENST00000527949 TCEAL8Q8IYN2 117 aa12.09□□□□□ -0.47
NR1H3-230ENST00000527949 SUMF1Q8NBK3 374 aa12.09□□□□□ -0.47
NR1H3-230ENST00000527949 FEZF2Q8TBJ5 459 aa12.09□□□□□ -0.47
NR1H3-230ENST00000527949 C18orf25Q96B23 403 aaPredicted RBP12.09□□□□□ -0.47
NR1H3-230ENST00000527949 CLIC6Q96NY7 704 aa12.09□□□□□ -0.47
NR1H3-230ENST00000527949 MYADMQ96S97 322 aa12.09□□□□□ -0.47
NR1H3-230ENST00000527949 NELL2Q99435 816 aa12.09□□□□□ -0.47
NR1H3-230ENST00000527949 LRRC27Q9C0I9 530 aa12.09□□□□□ -0.47
NR1H3-230ENST00000527949 EXOC7Q9UPT5 735 aa12.09□□□□□ -0.47
NR1H3-230ENST00000527949 C2CD2Q9Y426 696 aa12.09□□□□□ -0.47
NR1H3-230ENST00000527949 NUB1Q9Y5A7 615 aa12.09□□□□□ -0.47
NR1H3-230ENST00000527949 CDY1Q9Y6F8 540 aa12.09□□□□□ -0.47
NR1H3-230ENST00000527949 VPS13AQ96RL7 3174 aa12.09□□□□□ -0.47
NR1H3-230ENST00000527949 ANK1P16157 1881 aa12.08□□□□□ -0.48
NR1H3-230ENST00000527949 NOTCH4Q99466 2003 aa12.08□□□□□ -0.48
NR1H3-230ENST00000527949 KANSL1LA0AUZ9 987 aa12.08□□□□□ -0.48
NR1H3-230ENST00000527949 LACTBL1A8MY62 500 aa12.08□□□□□ -0.48
NR1H3-230ENST00000527949 NCAM2O15394 837 aa12.08□□□□□ -0.48
NR1H3-230ENST00000527949 SPATA31D3P0C874 917 aa12.08□□□□□ -0.48
NR1H3-230ENST00000527949 ATF2P15336 505 aa12.08□□□□□ -0.48
NR1H3-230ENST00000527949 TYMPP19971 482 aa12.08□□□□□ -0.48
NR1H3-230ENST00000527949 NMT1P30419 496 aaKnown RBP12.08□□□□□ -0.48
NR1H3-230ENST00000527949 STAT6P42226 847 aa12.08□□□□□ -0.48
NR1H3-230ENST00000527949 MATR3P43243 847 aaKnown RBP eCLIP12.08□□□□□ -0.48
NR1H3-230ENST00000527949 ROR1Q01973 937 aa12.08□□□□□ -0.48
NR1H3-230ENST00000527949 STK38Q15208 465 aa12.08□□□□□ -0.48
NR1H3-230ENST00000527949 AXDND1Q5T1B0 1012 aaPredicted RBP12.08□□□□□ -0.48
NR1H3-230ENST00000527949 ZNF280DQ6N043 979 aa12.08□□□□□ -0.48
NR1H3-230ENST00000527949 SPATA31D4Q6ZUB0 917 aa12.08□□□□□ -0.48
NR1H3-230ENST00000527949 GET4Q7L5D6 327 aaPredicted RBP12.08□□□□□ -0.48
NR1H3-230ENST00000527949 SFR1Q86XK3 245 aa12.08□□□□□ -0.48
NR1H3-230ENST00000527949 GLYCTKQ8IVS8 523 aa12.08□□□□□ -0.48
NR1H3-230ENST00000527949 BEST2Q8NFU1 509 aa12.08□□□□□ -0.48
NR1H3-230ENST00000527949 KIF12Q96FN5 646 aa12.08□□□□□ -0.48
NR1H3-230ENST00000527949 MSTO1Q9BUK6 570 aa12.08□□□□□ -0.48
NR1H3-230ENST00000527949 FAM126AQ9BYI3 521 aaPredicted RBP12.08□□□□□ -0.48
NR1H3-230ENST00000527949 TNMDQ9H2S6 317 aa12.08□□□□□ -0.48
NR1H3-230ENST00000527949 MAGEF1Q9HAY2 307 aa12.08□□□□□ -0.48
NR1H3-230ENST00000527949 KBTBD4Q9NVX7 518 aa12.08□□□□□ -0.48
NR1H3-230ENST00000527949 PCDHB13Q9Y5F0 798 aa12.08□□□□□ -0.48
NR1H3-230ENST00000527949 NUMBLQ9Y6R0 609 aa12.08□□□□□ -0.48
NR1H3-230ENST00000527949 ANO9A1A5B4 782 aa12.07□□□□□ -0.48
NR1H3-230ENST00000527949 KIAA0391O15091 583 aaKnown RBP12.07□□□□□ -0.48
NR1H3-230ENST00000527949 CUTAO60888 179 aa12.07□□□□□ -0.48
NR1H3-230ENST00000527949 MICAL2O94851 1124 aa12.07□□□□□ -0.48
NR1H3-230ENST00000527949 ZSCAN22P10073 491 aaPredicted RBP12.07□□□□□ -0.48
NR1H3-230ENST00000527949 GARTP22102 1010 aa12.07□□□□□ -0.48
NR1H3-230ENST00000527949 FSHRP23945 695 aa12.07□□□□□ -0.48
NR1H3-230ENST00000527949 MCM4P33991 863 aa12.07□□□□□ -0.48
NR1H3-230ENST00000527949 TNFSF9P41273 254 aa12.07□□□□□ -0.48
NR1H3-230ENST00000527949 E2F4Q16254 413 aa12.07□□□□□ -0.48
NR1H3-230ENST00000527949 SEZ6Q53EL9 994 aa12.07□□□□□ -0.48
NR1H3-230ENST00000527949 L1TD1Q5T7N2 865 aaKnown RBP12.07□□□□□ -0.48
NR1H3-230ENST00000527949 SLC7A14Q8TBB6 771 aa12.07□□□□□ -0.48
NR1H3-230ENST00000527949 ACCSQ96QU6 501 aa12.07□□□□□ -0.48
NR1H3-230ENST00000527949 RTKNQ9BST9 563 aa12.07□□□□□ -0.48
NR1H3-230ENST00000527949 DDX23Q9BUQ8 820 aaKnown RBP12.07□□□□□ -0.48
NR1H3-230ENST00000527949 ZHX3Q9H4I2 956 aa12.07□□□□□ -0.48
NR1H3-230ENST00000527949 SPATA6Q9NWH7 488 aaPredicted RBP12.07□□□□□ -0.48
NR1H3-230ENST00000527949 ZSCAN32Q9NX65 697 aa12.07□□□□□ -0.48
NR1H3-230ENST00000527949 TUBGCP4Q9UGJ1 667 aa12.07□□□□□ -0.48
NR1H3-230ENST00000527949 AFF4Q9UHB7 1163 aaKnown RBP12.07□□□□□ -0.48
NR1H3-230ENST00000527949 FBXL5Q9UKA1 691 aa12.07□□□□□ -0.48
NR1H3-230ENST00000527949 AGO2Q9UKV8 859 aaKnown RBP12.07□□□□□ -0.48
NR1H3-230ENST00000527949 CDV3Q9UKY7 258 aaKnown RBP12.07□□□□□ -0.48
NR1H3-230ENST00000527949 CDH7Q9ULB5 785 aa12.07□□□□□ -0.48
NR1H3-230ENST00000527949 A0A087X0B3 334 aa12.06□□□□□ -0.48
NR1H3-230ENST00000527949 WDR27A2RRH5 827 aa12.06□□□□□ -0.48
NR1H3-230ENST00000527949 OR6C75A6NL08 312 aa12.06□□□□□ -0.48
NR1H3-230ENST00000527949 ANKRD63C9JTQ0 380 aa12.06□□□□□ -0.48
NR1H3-230ENST00000527949 I3L4J1 428 aa12.06□□□□□ -0.48
NR1H3-230ENST00000527949 PIRO00625 290 aa12.06□□□□□ -0.48
NR1H3-230ENST00000527949 IL18RAPO95256 599 aa12.06□□□□□ -0.48
NR1H3-230ENST00000527949 LDHAP00338 332 aaKnown RBP12.06□□□□□ -0.48
NR1H3-230ENST00000527949 ELF1P32519 619 aa12.06□□□□□ -0.48
NR1H3-230ENST00000527949 AMPD3Q01432 767 aa12.06□□□□□ -0.48
NR1H3-230ENST00000527949 CEBPZQ03701 1054 aaKnown RBP12.06□□□□□ -0.48
NR1H3-230ENST00000527949 MYBPC2Q14324 1141 aa12.06□□□□□ -0.48
NR1H3-230ENST00000527949 PPP2R5DQ14738 602 aa12.06□□□□□ -0.48
NR1H3-230ENST00000527949 MLF2Q15773 248 aaPredicted RBP12.06□□□□□ -0.48
NR1H3-230ENST00000527949 CTXN3Q4LDR2 81 aa12.06□□□□□ -0.48
NR1H3-230ENST00000527949 ZC2HC1CQ53FD0 456 aaPredicted RBP12.06□□□□□ -0.48
NR1H3-230ENST00000527949 ZBTB41Q5SVQ8 909 aa12.06□□□□□ -0.48
NR1H3-230ENST00000527949 ADALQ6DHV7 355 aa12.06□□□□□ -0.48
NR1H3-230ENST00000527949 STXBP4Q6ZWJ1 553 aa12.06□□□□□ -0.48
NR1H3-230ENST00000527949 DYMQ7RTS9 669 aa12.06□□□□□ -0.48
NR1H3-230ENST00000527949 CCDC65Q8IXS2 484 aa12.06□□□□□ -0.48
NR1H3-230ENST00000527949 LEMD2Q8NC56 503 aa12.06□□□□□ -0.48
NR1H3-230ENST00000527949 CNTNAP3BQ96NU0 1288 aa12.06□□□□□ -0.48
NR1H3-230ENST00000527949 CNTNAP3Q9BZ76 1288 aa12.06□□□□□ -0.48
NR1H3-230ENST00000527949 MRPL44Q9H9J2 332 aaKnown RBP12.06□□□□□ -0.48
NR1H3-230ENST00000527949 HSFX1Q9UBD0 423 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms