RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 GRASPQ7Z6J2 395 aaPredicted RBP35.78■■■■□ 3.32
SSSCA1-205ENST00000527920 NXPE3Q969Y0 559 aa35.78■■■■□ 3.32
SSSCA1-205ENST00000527920 CBWD1Q9BRT8 395 aa35.78■■■■□ 3.32
SSSCA1-205ENST00000527920 RAPGEFL1Q9UHV5 662 aa35.78■■■■□ 3.32
SSSCA1-205ENST00000527920 PVALEFA0A1B0GWK0 134 aa35.77■■■■□ 3.32
SSSCA1-205ENST00000527920 CCL16O15467 120 aa35.77■■■■□ 3.32
SSSCA1-205ENST00000527920 EXTL3O43909 919 aa35.77■■■■□ 3.32
SSSCA1-205ENST00000527920 SLFN14P0C7P3 912 aa35.77■■■■□ 3.32
SSSCA1-205ENST00000527920 FSHRP23945 695 aa35.77■■■■□ 3.32
SSSCA1-205ENST00000527920 CMA1P23946 247 aa35.77■■■■□ 3.32
SSSCA1-205ENST00000527920 USP37Q86T82 979 aa35.77■■■■□ 3.32
SSSCA1-205ENST00000527920 EFCAB13Q8IY85 973 aa35.77■■■■□ 3.32
SSSCA1-205ENST00000527920 GLIS3Q8NEA6 775 aa35.77■■■■□ 3.32
SSSCA1-205ENST00000527920 SAAL1Q96ER3 474 aa35.77■■■■□ 3.32
SSSCA1-205ENST00000527920 SPATA32Q96LK8 384 aa35.77■■■■□ 3.32
SSSCA1-205ENST00000527920 KCNK12Q9HB15 430 aa35.77■■■■□ 3.32
SSSCA1-205ENST00000527920 AFF4Q9UHB7 1163 aaKnown RBP35.77■■■■□ 3.32
SSSCA1-205ENST00000527920 UBE4BO95155 1302 aa35.77■■■■□ 3.32
SSSCA1-205ENST00000527920 MYO10Q9HD67 2058 aa35.76■■■■□ 3.32
SSSCA1-205ENST00000527920 ANK1P16157 1881 aa35.76■■■■□ 3.32
SSSCA1-205ENST00000527920 ODC1P11926 461 aa35.76■■■■□ 3.32
SSSCA1-205ENST00000527920 ARMCX5Q6P1M9 558 aa35.76■■■■□ 3.32
SSSCA1-205ENST00000527920 CEP57L1Q8IYX8 460 aa35.76■■■■□ 3.32
SSSCA1-205ENST00000527920 ZNF507Q8TCN5 953 aa35.76■■■■□ 3.32
SSSCA1-205ENST00000527920 HPS3Q969F9 1004 aa35.76■■■■□ 3.32
SSSCA1-205ENST00000527920 PBXIP1Q96AQ6 731 aa35.76■■■■□ 3.32
SSSCA1-205ENST00000527920 DPP3Q9NY33 737 aa35.76■■■■□ 3.32
SSSCA1-205ENST00000527920 RBAKQ9NYW8 714 aaPredicted RBP35.76■■■■□ 3.32
SSSCA1-205ENST00000527920 OR6C75A6NL08 312 aa35.75■■■■□ 3.31
SSSCA1-205ENST00000527920 TDGQ13569 410 aa35.75■■■■□ 3.31
SSSCA1-205ENST00000527920 BECN1Q14457 450 aa35.75■■■■□ 3.31
SSSCA1-205ENST00000527920 GET4Q7L5D6 327 aaPredicted RBP35.75■■■■□ 3.31
SSSCA1-205ENST00000527920 SENP8Q96LD8 212 aa35.75■■■■□ 3.31
SSSCA1-205ENST00000527920 USP25Q9UHP3 1055 aa35.75■■■■□ 3.31
SSSCA1-205ENST00000527920 DOCK8Q8NF50 2099 aa35.74■■■■□ 3.31
SSSCA1-205ENST00000527920 PRRG1O14668 218 aa35.74■■■■□ 3.31
SSSCA1-205ENST00000527920 SPTLC1O15269 473 aa35.74■■■■□ 3.31
SSSCA1-205ENST00000527920 LAMP2P13473 410 aa35.74■■■■□ 3.31
SSSCA1-205ENST00000527920 ARPP19P56211 112 aa35.74■■■■□ 3.31
SSSCA1-205ENST00000527920 GPD1LQ8N335 351 aa35.74■■■■□ 3.31
SSSCA1-205ENST00000527920 ZSWIM2Q8NEG5 633 aa35.74■■■■□ 3.31
SSSCA1-205ENST00000527920 KCNH6Q9H252 994 aa35.74■■■■□ 3.31
SSSCA1-205ENST00000527920 AVENQ9NQS1 362 aaPredicted RBP35.74■■■■□ 3.31
SSSCA1-205ENST00000527920 POLIQ9UNA4 740 aa35.74■■■■□ 3.31
SSSCA1-205ENST00000527920 TIMM13Q9Y5L4 95 aaPredicted RBP35.74■■■■□ 3.31
SSSCA1-205ENST00000527920 ACTN4O43707 911 aaKnown RBP35.73■■■■□ 3.31
SSSCA1-205ENST00000527920 CYP11A1P05108 521 aa35.73■■■■□ 3.31
SSSCA1-205ENST00000527920 HOXD13P35453 343 aa35.73■■■■□ 3.31
SSSCA1-205ENST00000527920 OVOS1Q6IE37 1185 aa35.73■■■■□ 3.31
SSSCA1-205ENST00000527920 FBXL6Q8N531 539 aa35.73■■■■□ 3.31
SSSCA1-205ENST00000527920 SCAND2PQ9GZW5 306 aaPredicted RBP35.73■■■■□ 3.31
SSSCA1-205ENST00000527920 CYP4F11Q9HBI6 524 aa35.73■■■■□ 3.31
SSSCA1-205ENST00000527920 DSEQ9UL01 958 aa35.73■■■■□ 3.31
SSSCA1-205ENST00000527920 CDH7Q9ULB5 785 aa35.73■■■■□ 3.31
SSSCA1-205ENST00000527920 HPSEQ9Y251 543 aa35.73■■■■□ 3.31
SSSCA1-205ENST00000527920 ZDBF2Q9HCK1 2354 aa35.73■■■■□ 3.31
SSSCA1-205ENST00000527920 ZNF318Q5VUA4 2279 aa35.72■■■■□ 3.31
SSSCA1-205ENST00000527920 LRG1P02750 347 aa35.72■■■■□ 3.31
SSSCA1-205ENST00000527920 CPB1P15086 417 aa35.72■■■■□ 3.31
SSSCA1-205ENST00000527920 TAF6P49848 677 aa35.72■■■■□ 3.31
SSSCA1-205ENST00000527920 SNRPFP62306 86 aaKnown RBP35.72■■■■□ 3.31
SSSCA1-205ENST00000527920 MYBPC2Q14324 1141 aa35.72■■■■□ 3.31
SSSCA1-205ENST00000527920 CACTINQ8WUQ7 758 aaKnown RBP35.72■■■■□ 3.31
SSSCA1-205ENST00000527920 BLZF1Q9H2G9 400 aa35.72■■■■□ 3.31
SSSCA1-205ENST00000527920 DNMT3BQ9UBC3 853 aaKnown RBP35.72■■■■□ 3.31
SSSCA1-205ENST00000527920 DUSP12Q9UNI6 340 aa35.72■■■■□ 3.31
SSSCA1-205ENST00000527920 INSL5Q9Y5Q6 135 aa35.72■■■■□ 3.31
SSSCA1-205ENST00000527920 SEC24AO95486 1093 aa35.71■■■■□ 3.31
SSSCA1-205ENST00000527920 PFKFB1P16118 471 aa35.71■■■■□ 3.31
SSSCA1-205ENST00000527920 WNT7BP56706 349 aa35.71■■■■□ 3.31
SSSCA1-205ENST00000527920 NTHL1P78549 312 aa35.71■■■■□ 3.31
SSSCA1-205ENST00000527920 PABPC1LQ4VXU2 614 aaKnown RBP35.71■■■■□ 3.31
SSSCA1-205ENST00000527920 ZNF560Q96MR9 790 aa35.71■■■■□ 3.31
SSSCA1-205ENST00000527920 PCIF1Q9H4Z3 704 aa35.71■■■■□ 3.31
SSSCA1-205ENST00000527920 KIAA1586Q9HCI6 787 aa35.71■■■■□ 3.31
SSSCA1-205ENST00000527920 SERTAD1Q9UHV2 236 aa35.71■■■■□ 3.31
SSSCA1-205ENST00000527920 FAM237AA0A1B0GTK4 181 aa35.7■■■■□ 3.31
SSSCA1-205ENST00000527920 ANHXE9PGG2 379 aa35.7■■■■□ 3.31
SSSCA1-205ENST00000527920 PNPLA4P41247 253 aa35.7■■■■□ 3.31
SSSCA1-205ENST00000527920 AFMP43652 599 aa35.7■■■■□ 3.31
SSSCA1-205ENST00000527920 ADCY1Q08828 1119 aa35.7■■■■□ 3.31
SSSCA1-205ENST00000527920 CUL4BQ13620 913 aa35.7■■■■□ 3.31
SSSCA1-205ENST00000527920 BMT2Q1RMZ1 405 aa35.7■■■■□ 3.31
SSSCA1-205ENST00000527920 SUGP1Q8IWZ8 645 aaKnown RBP35.7■■■■□ 3.31
SSSCA1-205ENST00000527920 SMOC2Q9H3U7 446 aa35.7■■■■□ 3.31
SSSCA1-205ENST00000527920 GOLGA8IPA6NC78 632 aa35.69■■■■□ 3.3
SSSCA1-205ENST00000527920 GOLGA8JA6NMD2 632 aa35.69■■■■□ 3.3
SSSCA1-205ENST00000527920 MYL1P05976 194 aa35.69■■■■□ 3.3
SSSCA1-205ENST00000527920 CASP1P29466 404 aa35.69■■■■□ 3.3
SSSCA1-205ENST00000527920 TFAMQ00059 246 aaKnown RBP35.69■■■■□ 3.3
SSSCA1-205ENST00000527920 GPR17Q13304 367 aa35.69■■■■□ 3.3
SSSCA1-205ENST00000527920 SV2CQ496J9 727 aa35.69■■■■□ 3.3
SSSCA1-205ENST00000527920 RNF19BQ6ZMZ0 732 aa35.69■■■■□ 3.3
SSSCA1-205ENST00000527920 SCFD1Q8WVM8 642 aa35.69■■■■□ 3.3
SSSCA1-205ENST00000527920 HCFC1R1Q9NWW0 138 aa35.69■■■■□ 3.3
SSSCA1-205ENST00000527920 MUC6Q6W4X9 2439 aa35.68■■■■□ 3.3
SSSCA1-205ENST00000527920 HTR4Q13639 388 aa35.68■■■■□ 3.3
SSSCA1-205ENST00000527920 C1orf127Q8N9H9 656 aa35.68■■■■□ 3.3
SSSCA1-205ENST00000527920 FGF13Q92913 245 aa35.68■■■■□ 3.3
SSSCA1-205ENST00000527920 BORCS6Q96GS4 357 aa35.68■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms