RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 NT5DC4Q86YG4 428 aa15.4■□□□□ 0.06
CAPN1-212ENST00000527887 PHOX2BQ99453 314 aa15.4■□□□□ 0.06
CAPN1-212ENST00000527887 TBC1D17Q9HA65 648 aa15.4■□□□□ 0.06
CAPN1-212ENST00000527887 OLFML3Q9NRN5 406 aa15.4■□□□□ 0.06
CAPN1-212ENST00000527887 AGO2Q9UKV8 859 aaKnown RBP15.4■□□□□ 0.06
CAPN1-212ENST00000527887 CA14Q9ULX7 337 aa15.4■□□□□ 0.06
CAPN1-212ENST00000527887 SIT1Q9Y3P8 196 aa15.4■□□□□ 0.06
CAPN1-212ENST00000527887 PCDHB13Q9Y5F0 798 aa15.4■□□□□ 0.06
CAPN1-212ENST00000527887 PPP1R37O75864 691 aa15.39■□□□□ 0.05
CAPN1-212ENST00000527887 SEC24AO95486 1093 aa15.39■□□□□ 0.05
CAPN1-212ENST00000527887 ODC1P11926 461 aa15.39■□□□□ 0.05
CAPN1-212ENST00000527887 CPB1P15086 417 aa15.39■□□□□ 0.05
CAPN1-212ENST00000527887 LILRA4P59901 499 aa15.39■□□□□ 0.05
CAPN1-212ENST00000527887 GPC5P78333 572 aa15.39■□□□□ 0.05
CAPN1-212ENST00000527887 GPR17Q13304 367 aa15.39■□□□□ 0.05
CAPN1-212ENST00000527887 TMEM132DQ14C87 1099 aa15.39■□□□□ 0.05
CAPN1-212ENST00000527887 ZBTB41Q5SVQ8 909 aa15.39■□□□□ 0.05
CAPN1-212ENST00000527887 JADE1Q6IE81 842 aa15.39■□□□□ 0.05
CAPN1-212ENST00000527887 PDZD4Q76G19 769 aaPredicted RBP15.39■□□□□ 0.05
CAPN1-212ENST00000527887 DYMQ7RTS9 669 aa15.39■□□□□ 0.05
CAPN1-212ENST00000527887 ELSPBP1Q96BH3 223 aa15.39■□□□□ 0.05
CAPN1-212ENST00000527887 DNAJC19Q96DA6 116 aa15.39■□□□□ 0.05
CAPN1-212ENST00000527887 FAM212AQ96EL1 285 aa15.39■□□□□ 0.05
CAPN1-212ENST00000527887 CLIC6Q96NY7 704 aa15.39■□□□□ 0.05
CAPN1-212ENST00000527887 CORO1BQ9BR76 489 aa15.39■□□□□ 0.05
CAPN1-212ENST00000527887 RPP25Q9BUL9 199 aaKnown RBP15.39■□□□□ 0.05
CAPN1-212ENST00000527887 STRA6Q9BX79 667 aa15.39■□□□□ 0.05
CAPN1-212ENST00000527887 LRRC27Q9C0I9 530 aa15.39■□□□□ 0.05
CAPN1-212ENST00000527887 MRPL44Q9H9J2 332 aaKnown RBP15.39■□□□□ 0.05
CAPN1-212ENST00000527887 HSFX1Q9UBD0 423 aa15.39■□□□□ 0.05
CAPN1-212ENST00000527887 DSEQ9UL01 958 aa15.39■□□□□ 0.05
CAPN1-212ENST00000527887 VWA8A3KMH1 1905 aa15.39■□□□□ 0.05
CAPN1-212ENST00000527887 ANO9A1A5B4 782 aa15.38■□□□□ 0.05
CAPN1-212ENST00000527887 MYMKA6NI61 221 aa15.38■□□□□ 0.05
CAPN1-212ENST00000527887 ANKRD63C9JTQ0 380 aa15.38■□□□□ 0.05
CAPN1-212ENST00000527887 PIRO00625 290 aa15.38■□□□□ 0.05
CAPN1-212ENST00000527887 IL18RAPO95256 599 aa15.38■□□□□ 0.05
CAPN1-212ENST00000527887 LDHAP00338 332 aaKnown RBP15.38■□□□□ 0.05
CAPN1-212ENST00000527887 NASPP49321 788 aaPredicted RBP15.38■□□□□ 0.05
CAPN1-212ENST00000527887 ACOT2P49753 483 aa15.38■□□□□ 0.05
CAPN1-212ENST00000527887 EPHA5P54756 1037 aa15.38■□□□□ 0.05
CAPN1-212ENST00000527887 ZC2HC1CQ53FD0 456 aaPredicted RBP15.38■□□□□ 0.05
CAPN1-212ENST00000527887 PRSS36Q5K4E3 855 aa15.38■□□□□ 0.05
CAPN1-212ENST00000527887 C9orf57Q5W0N0 161 aa15.38■□□□□ 0.05
CAPN1-212ENST00000527887 OVOS1Q6IE37 1185 aa15.38■□□□□ 0.05
CAPN1-212ENST00000527887 ARMCX5Q6P1M9 558 aa15.38■□□□□ 0.05
CAPN1-212ENST00000527887 SFR1Q86XK3 245 aa15.38■□□□□ 0.05
CAPN1-212ENST00000527887 POMGNT1Q8WZA1 660 aa15.38■□□□□ 0.05
CAPN1-212ENST00000527887 MCRS1Q96EZ8 462 aa15.38■□□□□ 0.05
CAPN1-212ENST00000527887 ACCSQ96QU6 501 aa15.38■□□□□ 0.05
CAPN1-212ENST00000527887 USP28Q96RU2 1077 aa15.38■□□□□ 0.05
CAPN1-212ENST00000527887 OSBPL6Q9BZF3 934 aa15.38■□□□□ 0.05
CAPN1-212ENST00000527887 GPR88Q9GZN0 384 aa15.38■□□□□ 0.05
CAPN1-212ENST00000527887 FAM86C1Q9NVL1 165 aa15.38■□□□□ 0.05
CAPN1-212ENST00000527887 ASB3Q9Y575 518 aa15.38■□□□□ 0.05
CAPN1-212ENST00000527887 FRMD3A2A2Y4 597 aa15.37■□□□□ 0.05
CAPN1-212ENST00000527887 GFRA3O60609 400 aa15.37■□□□□ 0.05
CAPN1-212ENST00000527887 PPP6R2O75170 966 aa15.37■□□□□ 0.05
CAPN1-212ENST00000527887 CYP11A1P05108 521 aa15.37■□□□□ 0.05
CAPN1-212ENST00000527887 GARTP22102 1010 aa15.37■□□□□ 0.05
CAPN1-212ENST00000527887 STAT6P42226 847 aa15.37■□□□□ 0.05
CAPN1-212ENST00000527887 CEBPZQ03701 1054 aaKnown RBP15.37■□□□□ 0.05
CAPN1-212ENST00000527887 TWF1Q12792 350 aa15.37■□□□□ 0.05
CAPN1-212ENST00000527887 SMARCB1Q12824 385 aa15.37■□□□□ 0.05
CAPN1-212ENST00000527887 ANGPT1Q15389 498 aa15.37■□□□□ 0.05
CAPN1-212ENST00000527887 SLC5A9Q2M3M2 681 aa15.37■□□□□ 0.05
CAPN1-212ENST00000527887 SLC44A4Q53GD3 710 aa15.37■□□□□ 0.05
CAPN1-212ENST00000527887 L1TD1Q5T7N2 865 aaKnown RBP15.37■□□□□ 0.05
CAPN1-212ENST00000527887 FAM173BQ6P4H8 233 aa15.37■□□□□ 0.05
CAPN1-212ENST00000527887 RNF19BQ6ZMZ0 732 aa15.37■□□□□ 0.05
CAPN1-212ENST00000527887 SENP8Q96LD8 212 aa15.37■□□□□ 0.05
CAPN1-212ENST00000527887 ZNF396Q96N95 335 aaPredicted RBP15.37■□□□□ 0.05
CAPN1-212ENST00000527887 NELL2Q99435 816 aa15.37■□□□□ 0.05
CAPN1-212ENST00000527887 SEMA4AQ9H3S1 761 aa15.37■□□□□ 0.05
CAPN1-212ENST00000527887 CUEDC2Q9H467 287 aa15.37■□□□□ 0.05
CAPN1-212ENST00000527887 TMEM206Q9H813 350 aa15.37■□□□□ 0.05
CAPN1-212ENST00000527887 ZFP14Q9HCL3 533 aa15.37■□□□□ 0.05
CAPN1-212ENST00000527887 ASAH2Q9NR71 780 aa15.37■□□□□ 0.05
CAPN1-212ENST00000527887 DOCK8Q8NF50 2099 aa15.37■□□□□ 0.05
CAPN1-212ENST00000527887 CITO14578 2027 aa15.36■□□□□ 0.05
CAPN1-212ENST00000527887 KIAA0391O15091 583 aaKnown RBP15.36■□□□□ 0.05
CAPN1-212ENST00000527887 FGF19O95750 216 aa15.36■□□□□ 0.05
CAPN1-212ENST00000527887 NFICP08651 508 aa15.36■□□□□ 0.05
CAPN1-212ENST00000527887 ADSSP30520 456 aa15.36■□□□□ 0.05
CAPN1-212ENST00000527887 MAGEA9P43362 315 aa15.36■□□□□ 0.05
CAPN1-212ENST00000527887 ALDH1A3P47895 512 aa15.36■□□□□ 0.05
CAPN1-212ENST00000527887 EPHB3P54753 998 aa15.36■□□□□ 0.05
CAPN1-212ENST00000527887 STK38Q15208 465 aa15.36■□□□□ 0.05
CAPN1-212ENST00000527887 MLF2Q15773 248 aaPredicted RBP15.36■□□□□ 0.05
CAPN1-212ENST00000527887 STXBP4Q6ZWJ1 553 aa15.36■□□□□ 0.05
CAPN1-212ENST00000527887 METTL23Q86XA0 190 aa15.36■□□□□ 0.05
CAPN1-212ENST00000527887 LINC00301Q8NCQ3 95 aa15.36■□□□□ 0.05
CAPN1-212ENST00000527887 PJA1Q8NG27 643 aa15.36■□□□□ 0.05
CAPN1-212ENST00000527887 ING5Q8WYH8 240 aa15.36■□□□□ 0.05
CAPN1-212ENST00000527887 E2F7Q96AV8 911 aa15.36■□□□□ 0.05
CAPN1-212ENST00000527887 BORCS6Q96GS4 357 aa15.36■□□□□ 0.05
CAPN1-212ENST00000527887 DDX23Q9BUQ8 820 aaKnown RBP15.36■□□□□ 0.05
CAPN1-212ENST00000527887 TRPV4Q9HBA0 871 aa15.36■□□□□ 0.05
CAPN1-212ENST00000527887 TIMM13Q9Y5L4 95 aaPredicted RBP15.36■□□□□ 0.05
CAPN1-212ENST00000527887 DMDP11532 3685 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms