RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 LUZP1Q86V48 1076 aa11.61□□□□□ -0.55
NEDD8-205ENST00000527046 VPS52Q8N1B4 723 aa11.61□□□□□ -0.55
NEDD8-205ENST00000527046 LRRC52Q8N7C0 313 aa11.61□□□□□ -0.55
NEDD8-205ENST00000527046 LNX1Q8TBB1 728 aaPredicted RBP11.61□□□□□ -0.55
NEDD8-205ENST00000527046 AUTS2Q8WXX7 1259 aa11.61□□□□□ -0.55
NEDD8-205ENST00000527046 ANKRD36BP1Q96IX9 119 aa11.61□□□□□ -0.55
NEDD8-205ENST00000527046 CDX2Q99626 313 aaPredicted RBP11.61□□□□□ -0.55
NEDD8-205ENST00000527046 RTP3Q9BQQ7 232 aa11.61□□□□□ -0.55
NEDD8-205ENST00000527046 PI4K2AQ9BTU6 479 aa11.61□□□□□ -0.55
NEDD8-205ENST00000527046 C11orf84Q9BUA3 381 aaPredicted RBP11.61□□□□□ -0.55
NEDD8-205ENST00000527046 GDAP2Q9NXN4 497 aa11.61□□□□□ -0.55
NEDD8-205ENST00000527046 LIMA1Q9UHB6 759 aaKnown RBP11.61□□□□□ -0.55
NEDD8-205ENST00000527046 NUB1Q9Y5A7 615 aa11.61□□□□□ -0.55
NEDD8-205ENST00000527046 IRAK3Q9Y616 596 aa11.61□□□□□ -0.55
NEDD8-205ENST00000527046 MTCH2Q9Y6C9 303 aa11.61□□□□□ -0.55
NEDD8-205ENST00000527046 KPNA7A9QM74 516 aa11.6□□□□□ -0.55
NEDD8-205ENST00000527046 ADAM12O43184 909 aa11.6□□□□□ -0.55
NEDD8-205ENST00000527046 XPOTO43592 962 aaKnown RBP11.6□□□□□ -0.55
NEDD8-205ENST00000527046 HCRTO43612 131 aa11.6□□□□□ -0.55
NEDD8-205ENST00000527046 TNNC2P02585 160 aa11.6□□□□□ -0.55
NEDD8-205ENST00000527046 CTSAP10619 480 aa11.6□□□□□ -0.55
NEDD8-205ENST00000527046 TKTP29401 623 aaKnown RBP11.6□□□□□ -0.55
NEDD8-205ENST00000527046 PPM1AP35813 382 aa11.6□□□□□ -0.55
NEDD8-205ENST00000527046 DSG1Q02413 1049 aa11.6□□□□□ -0.55
NEDD8-205ENST00000527046 NCOA4Q13772 614 aa11.6□□□□□ -0.55
NEDD8-205ENST00000527046 KCNC3Q14003 757 aa11.6□□□□□ -0.55
NEDD8-205ENST00000527046 KRT31Q15323 416 aa11.6□□□□□ -0.55
NEDD8-205ENST00000527046 SOWAHAQ2M3V2 549 aa11.6□□□□□ -0.55
NEDD8-205ENST00000527046 CCDC40Q4G0X9 1142 aa11.6□□□□□ -0.55
NEDD8-205ENST00000527046 ZNF697Q5TEC3 545 aa11.6□□□□□ -0.55
NEDD8-205ENST00000527046 FAM171A1Q5VUB5 890 aa11.6□□□□□ -0.55
NEDD8-205ENST00000527046 KRT39Q6A163 491 aa11.6□□□□□ -0.55
NEDD8-205ENST00000527046 SPOPLQ6IQ16 392 aa11.6□□□□□ -0.55
NEDD8-205ENST00000527046 PRSS55Q6UWB4 352 aaPredicted RBP11.6□□□□□ -0.55
NEDD8-205ENST00000527046 ADGRD2Q7Z7M1 963 aa11.6□□□□□ -0.55
NEDD8-205ENST00000527046 MRPL43Q8N983 215 aaKnown RBP11.6□□□□□ -0.55
NEDD8-205ENST00000527046 TATDN2Q93075 761 aa11.6□□□□□ -0.55
NEDD8-205ENST00000527046 HPDLQ96IR7 371 aa11.6□□□□□ -0.55
NEDD8-205ENST00000527046 SENP8Q96LD8 212 aa11.6□□□□□ -0.55
NEDD8-205ENST00000527046 HERC2P3Q9BVR0 1158 aa11.6□□□□□ -0.55
NEDD8-205ENST00000527046 SDCBP2Q9H190 292 aa11.6□□□□□ -0.55
NEDD8-205ENST00000527046 RXFP1Q9HBX9 757 aa11.6□□□□□ -0.55
NEDD8-205ENST00000527046 TIMM13Q9Y5L4 95 aaPredicted RBP11.6□□□□□ -0.55
NEDD8-205ENST00000527046 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.6□□□□□ -0.55
NEDD8-205ENST00000527046 TSC2P49815 1807 aa11.6□□□□□ -0.55
NEDD8-205ENST00000527046 C2orf71A6NGG8 1288 aa11.59□□□□□ -0.55
NEDD8-205ENST00000527046 GABRDO14764 452 aa11.59□□□□□ -0.55
NEDD8-205ENST00000527046 OAZ2O95190 189 aa11.59□□□□□ -0.55
NEDD8-205ENST00000527046 FGFR1OPO95684 399 aaKnown RBP11.59□□□□□ -0.55
NEDD8-205ENST00000527046 CYP11A1P05108 521 aa11.59□□□□□ -0.55
NEDD8-205ENST00000527046 KRT19P08727 400 aa11.59□□□□□ -0.55
NEDD8-205ENST00000527046 TAF6P49848 677 aa11.59□□□□□ -0.55
NEDD8-205ENST00000527046 APBA1Q02410 837 aa11.59□□□□□ -0.55
NEDD8-205ENST00000527046 KRT17Q04695 432 aa11.59□□□□□ -0.55
NEDD8-205ENST00000527046 PTPN14Q15678 1187 aa11.59□□□□□ -0.55
NEDD8-205ENST00000527046 VWA3BQ502W6 1294 aa11.59□□□□□ -0.55
NEDD8-205ENST00000527046 DCAF17Q5H9S7 520 aaPredicted RBP11.59□□□□□ -0.55
NEDD8-205ENST00000527046 OSTM1Q86WC4 334 aa11.59□□□□□ -0.55
NEDD8-205ENST00000527046 GPR65Q8IYL9 337 aa11.59□□□□□ -0.55
NEDD8-205ENST00000527046 EHBP1Q8NDI1 1231 aa11.59□□□□□ -0.55
NEDD8-205ENST00000527046 KBTBD7Q8WVZ9 684 aa11.59□□□□□ -0.55
NEDD8-205ENST00000527046 MRPL38Q96DV4 380 aaKnown RBP11.59□□□□□ -0.55
NEDD8-205ENST00000527046 TMEM169Q96HH4 297 aa11.59□□□□□ -0.55
NEDD8-205ENST00000527046 CLSTN3Q9BQT9 956 aa11.59□□□□□ -0.55
NEDD8-205ENST00000527046 TUBGCP2Q9BSJ2 902 aa11.59□□□□□ -0.55
NEDD8-205ENST00000527046 LMAN2LQ9H0V9 348 aa11.59□□□□□ -0.55
NEDD8-205ENST00000527046 MMRN2Q9H8L6 949 aa11.59□□□□□ -0.55
NEDD8-205ENST00000527046 SIX2Q9NPC8 291 aa11.59□□□□□ -0.55
NEDD8-205ENST00000527046 RAB20Q9NX57 234 aa11.59□□□□□ -0.55
NEDD8-205ENST00000527046 LMCD1Q9NZU5 365 aa11.59□□□□□ -0.55
NEDD8-205ENST00000527046 PCDHB8Q9UN66 801 aa11.59□□□□□ -0.55
NEDD8-205ENST00000527046 L1RE1Q9UN81 338 aa11.59□□□□□ -0.55
NEDD8-205ENST00000527046 POLIQ9UNA4 740 aa11.59□□□□□ -0.55
NEDD8-205ENST00000527046 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.59□□□□□ -0.55
NEDD8-205ENST00000527046 PRRC2BQ5JSZ5 2229 aaKnown RBP11.59□□□□□ -0.55
NEDD8-205ENST00000527046 SZT2Q5T011 3432 aa11.58□□□□□ -0.56
NEDD8-205ENST00000527046 CARNS1A5YM72 827 aa11.58□□□□□ -0.56
NEDD8-205ENST00000527046 TULP1O00294 542 aaPredicted RBP11.58□□□□□ -0.56
NEDD8-205ENST00000527046 CYB561D2O14569 222 aa11.58□□□□□ -0.56
NEDD8-205ENST00000527046 SYN3O14994 580 aa11.58□□□□□ -0.56
NEDD8-205ENST00000527046 AP5Z1O43299 807 aa11.58□□□□□ -0.56
NEDD8-205ENST00000527046 VNN2O95498 520 aa11.58□□□□□ -0.56
NEDD8-205ENST00000527046 CXCL14O95715 111 aa11.58□□□□□ -0.56
NEDD8-205ENST00000527046 CNPP09543 421 aaKnown RBP11.58□□□□□ -0.56
NEDD8-205ENST00000527046 SLC9A1P19634 815 aa11.58□□□□□ -0.56
NEDD8-205ENST00000527046 EEF1GP26641 437 aaKnown RBP11.58□□□□□ -0.56
NEDD8-205ENST00000527046 ATICP31939 592 aa11.58□□□□□ -0.56
NEDD8-205ENST00000527046 GTF2F1P35269 517 aaKnown RBP eCLIP11.58□□□□□ -0.56
NEDD8-205ENST00000527046 CDH8P55286 799 aa11.58□□□□□ -0.56
NEDD8-205ENST00000527046 MAN2A1Q16706 1144 aa11.58□□□□□ -0.56
NEDD8-205ENST00000527046 SGSM1Q2NKQ1 1148 aa11.58□□□□□ -0.56
NEDD8-205ENST00000527046 USP41Q3LFD5 358 aa11.58□□□□□ -0.56
NEDD8-205ENST00000527046 TCERG1LQ5VWI1 586 aa11.58□□□□□ -0.56
NEDD8-205ENST00000527046 WSCD1Q658N2 575 aa11.58□□□□□ -0.56
NEDD8-205ENST00000527046 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.58□□□□□ -0.56
NEDD8-205ENST00000527046 PDCL2Q8N4E4 241 aa11.58□□□□□ -0.56
NEDD8-205ENST00000527046 DEFB123Q8N688 67 aa11.58□□□□□ -0.56
NEDD8-205ENST00000527046 UBR7Q8N806 425 aa11.58□□□□□ -0.56
NEDD8-205ENST00000527046 FBXL13Q8NEE6 735 aa11.58□□□□□ -0.56
NEDD8-205ENST00000527046 FAM200AQ8TCP9 573 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms