RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 P4HA2O15460 535 aa13.69□□□□□ -0.22
SSSCA1-203ENST00000526877 ZC3H11AO75152 810 aaKnown RBP eCLIP13.69□□□□□ -0.22
SSSCA1-203ENST00000526877 IL18RAPO95256 599 aa13.69□□□□□ -0.22
SSSCA1-203ENST00000526877 NPTXRO95502 500 aa13.69□□□□□ -0.22
SSSCA1-203ENST00000526877 TRIM49P0CI25 452 aa13.69□□□□□ -0.22
SSSCA1-203ENST00000526877 TRIM49CP0CI26 452 aa13.69□□□□□ -0.22
SSSCA1-203ENST00000526877 SLC11A1P49279 550 aa13.69□□□□□ -0.22
SSSCA1-203ENST00000526877 FMO5P49326 533 aa13.69□□□□□ -0.22
SSSCA1-203ENST00000526877 GSDMDP57764 484 aa13.69□□□□□ -0.22
SSSCA1-203ENST00000526877 SEZ6Q53EL9 994 aa13.69□□□□□ -0.22
SSSCA1-203ENST00000526877 GBP6Q6ZN66 633 aa13.69□□□□□ -0.22
SSSCA1-203ENST00000526877 TMC7Q7Z402 723 aa13.69□□□□□ -0.22
SSSCA1-203ENST00000526877 ADHFE1Q8IWW8 467 aa13.69□□□□□ -0.22
SSSCA1-203ENST00000526877 SMRP1Q8NCR6 262 aa13.69□□□□□ -0.22
SSSCA1-203ENST00000526877 IQCDQ96DY2 449 aa13.69□□□□□ -0.22
SSSCA1-203ENST00000526877 IGSF21Q96ID5 467 aa13.69□□□□□ -0.22
SSSCA1-203ENST00000526877 CCDC94Q9BW85 323 aaPredicted RBP13.69□□□□□ -0.22
SSSCA1-203ENST00000526877 VN1R3Q9BXE9 311 aa13.69□□□□□ -0.22
SSSCA1-203ENST00000526877 MMRN2Q9H8L6 949 aa13.69□□□□□ -0.22
SSSCA1-203ENST00000526877 RSAD1Q9HA92 442 aa13.69□□□□□ -0.22
SSSCA1-203ENST00000526877 IPPQ9Y573 584 aa13.69□□□□□ -0.22
SSSCA1-203ENST00000526877 ANK1P16157 1881 aa13.69□□□□□ -0.22
SSSCA1-203ENST00000526877 C2orf71A6NGG8 1288 aa13.68□□□□□ -0.22
SSSCA1-203ENST00000526877 LRRIQ3A6PVS8 624 aaPredicted RBP13.68□□□□□ -0.22
SSSCA1-203ENST00000526877 FAM189A1O60320 539 aa13.68□□□□□ -0.22
SSSCA1-203ENST00000526877 DLATP10515 647 aaKnown RBP13.68□□□□□ -0.22
SSSCA1-203ENST00000526877 ITGA4P13612 1032 aa13.68□□□□□ -0.22
SSSCA1-203ENST00000526877 TNNI1P19237 187 aa13.68□□□□□ -0.22
SSSCA1-203ENST00000526877 TNFSF9P41273 254 aa13.68□□□□□ -0.22
SSSCA1-203ENST00000526877 GRM5P41594 1212 aa13.68□□□□□ -0.22
SSSCA1-203ENST00000526877 AP3M2P53677 418 aa13.68□□□□□ -0.22
SSSCA1-203ENST00000526877 OSTNP61366 133 aa13.68□□□□□ -0.22
SSSCA1-203ENST00000526877 DLG4P78352 724 aa13.68□□□□□ -0.22
SSSCA1-203ENST00000526877 MYL7Q01449 175 aa13.68□□□□□ -0.22
SSSCA1-203ENST00000526877 PTPN21Q16825 1174 aa13.68□□□□□ -0.22
SSSCA1-203ENST00000526877 EXOC3L4Q17RC7 722 aa13.68□□□□□ -0.22
SSSCA1-203ENST00000526877 ZBTB41Q5SVQ8 909 aa13.68□□□□□ -0.22
SSSCA1-203ENST00000526877 DDX53Q86TM3 631 aaKnown RBP13.68□□□□□ -0.22
SSSCA1-203ENST00000526877 NEK11Q8NG66 645 aa13.68□□□□□ -0.22
SSSCA1-203ENST00000526877 PLEKHO2Q8TD55 490 aa13.68□□□□□ -0.22
SSSCA1-203ENST00000526877 TRIM44Q96DX7 344 aaPredicted RBP13.68□□□□□ -0.22
SSSCA1-203ENST00000526877 FAM212AQ96EL1 285 aa13.68□□□□□ -0.22
SSSCA1-203ENST00000526877 ACAP3Q96P50 834 aa13.68□□□□□ -0.22
SSSCA1-203ENST00000526877 S1PR5Q9H228 398 aa13.68□□□□□ -0.22
SSSCA1-203ENST00000526877 PDE11AQ9HCR9 933 aa13.68□□□□□ -0.22
SSSCA1-203ENST00000526877 ENTPD7Q9NQZ7 604 aa13.68□□□□□ -0.22
SSSCA1-203ENST00000526877 MIOSQ9NXC5 875 aa13.68□□□□□ -0.22
SSSCA1-203ENST00000526877 KANSL3Q9P2N6 904 aa13.68□□□□□ -0.22
SSSCA1-203ENST00000526877 HES2Q9Y543 173 aa13.68□□□□□ -0.22
SSSCA1-203ENST00000526877 IRAK3Q9Y616 596 aa13.68□□□□□ -0.22
SSSCA1-203ENST00000526877 TDRD15B5MCY1 1934 aaKnown RBP13.67□□□□□ -0.22
SSSCA1-203ENST00000526877 CARNS1A5YM72 827 aa13.67□□□□□ -0.22
SSSCA1-203ENST00000526877 PMM2O15305 246 aa13.67□□□□□ -0.22
SSSCA1-203ENST00000526877 CXCL14O95715 111 aa13.67□□□□□ -0.22
SSSCA1-203ENST00000526877 POMCP01189 267 aa13.67□□□□□ -0.22
SSSCA1-203ENST00000526877 TRIM21P19474 475 aaKnown RBP13.67□□□□□ -0.22
SSSCA1-203ENST00000526877 GCLMP48507 274 aa13.67□□□□□ -0.22
SSSCA1-203ENST00000526877 MXI1P50539 228 aa13.67□□□□□ -0.22
SSSCA1-203ENST00000526877 YARSP54577 528 aaKnown RBP13.67□□□□□ -0.22
SSSCA1-203ENST00000526877 CLDN10P78369 228 aa13.67□□□□□ -0.22
SSSCA1-203ENST00000526877 RNASELQ05823 741 aaKnown RBP13.67□□□□□ -0.22
SSSCA1-203ENST00000526877 PPP3CAQ08209 521 aa13.67□□□□□ -0.22
SSSCA1-203ENST00000526877 KRT39Q6A163 491 aa13.67□□□□□ -0.22
SSSCA1-203ENST00000526877 SYCE2Q6PIF2 218 aa13.67□□□□□ -0.22
SSSCA1-203ENST00000526877 CCDC186Q7Z3E2 898 aa13.67□□□□□ -0.22
SSSCA1-203ENST00000526877 CD302Q8IX05 232 aa13.67□□□□□ -0.22
SSSCA1-203ENST00000526877 HACE1Q8IYU2 909 aa13.67□□□□□ -0.22
SSSCA1-203ENST00000526877 VPS52Q8N1B4 723 aa13.67□□□□□ -0.22
SSSCA1-203ENST00000526877 CEP120Q8N960 986 aa13.67□□□□□ -0.22
SSSCA1-203ENST00000526877 GSTCDQ8NEC7 633 aa13.67□□□□□ -0.22
SSSCA1-203ENST00000526877 TMEM169Q96HH4 297 aa13.67□□□□□ -0.22
SSSCA1-203ENST00000526877 CGRRF1Q99675 332 aa13.67□□□□□ -0.22
SSSCA1-203ENST00000526877 C1QTNF1Q9BXJ1 281 aa13.67□□□□□ -0.22
SSSCA1-203ENST00000526877 ZBP1Q9H171 429 aa13.67□□□□□ -0.22
SSSCA1-203ENST00000526877 TMEM8AQ9HCN3 771 aa13.67□□□□□ -0.22
SSSCA1-203ENST00000526877 UBN1Q9NPG3 1134 aa13.67□□□□□ -0.22
SSSCA1-203ENST00000526877 C11orf16Q9NQ32 467 aa13.67□□□□□ -0.22
SSSCA1-203ENST00000526877 SIK3Q9Y2K2 1263 aa13.67□□□□□ -0.22
SSSCA1-203ENST00000526877 TRIP11Q15643 1979 aa13.66□□□□□ -0.22
SSSCA1-203ENST00000526877 ARL5CA6NH57 179 aa13.66□□□□□ -0.22
SSSCA1-203ENST00000526877 NRP1O14786 923 aa13.66□□□□□ -0.22
SSSCA1-203ENST00000526877 CLASP2O75122 1294 aaKnown RBP13.66□□□□□ -0.22
SSSCA1-203ENST00000526877 EFEMP2O95967 443 aa13.66□□□□□ -0.22
SSSCA1-203ENST00000526877 ALDH2P05091 517 aa13.66□□□□□ -0.22
SSSCA1-203ENST00000526877 CTSAP10619 480 aa13.66□□□□□ -0.22
SSSCA1-203ENST00000526877 SSTR3P32745 418 aaPredicted RBP13.66□□□□□ -0.22
SSSCA1-203ENST00000526877 DSC1Q08554 894 aa13.66□□□□□ -0.22
SSSCA1-203ENST00000526877 KCNMA1Q12791 1236 aa13.66□□□□□ -0.22
SSSCA1-203ENST00000526877 TBX2Q13207 712 aaPredicted RBP13.66□□□□□ -0.22
SSSCA1-203ENST00000526877 SMC1AQ14683 1233 aaKnown RBP13.66□□□□□ -0.22
SSSCA1-203ENST00000526877 ENOX2Q16206 610 aaKnown RBP13.66□□□□□ -0.22
SSSCA1-203ENST00000526877 CBWD6Q4V339 395 aa13.66□□□□□ -0.22
SSSCA1-203ENST00000526877 FIGNQ5HY92 759 aa13.66□□□□□ -0.22
SSSCA1-203ENST00000526877 CBWD3Q5JTY5 395 aa13.66□□□□□ -0.22
SSSCA1-203ENST00000526877 CBWD5Q5RIA9 395 aa13.66□□□□□ -0.22
SSSCA1-203ENST00000526877 C1orf220Q5T0J3 134 aa13.66□□□□□ -0.22
SSSCA1-203ENST00000526877 ANKRD54Q6NXT1 300 aa13.66□□□□□ -0.22
SSSCA1-203ENST00000526877 WDR49Q8IV35 697 aa13.66□□□□□ -0.22
SSSCA1-203ENST00000526877 COLGALT2Q8IYK4 626 aa13.66□□□□□ -0.22
SSSCA1-203ENST00000526877 CCDC150Q8NCX0 1101 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms