RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 UBASH3AP57075 661 aa14.75□□□□□ -0.05
CD44-224ENST00000526669 LILRA4P59901 499 aa14.75□□□□□ -0.05
CD44-224ENST00000526669 NOP14P78316 857 aaKnown RBP14.75□□□□□ -0.05
CD44-224ENST00000526669 APBA1Q02410 837 aa14.75□□□□□ -0.05
CD44-224ENST00000526669 UBXN1Q04323 297 aa14.75□□□□□ -0.05
CD44-224ENST00000526669 SV2CQ496J9 727 aa14.75□□□□□ -0.05
CD44-224ENST00000526669 FILIP1LQ4L180 1135 aa14.75□□□□□ -0.05
CD44-224ENST00000526669 TIGD5Q53EQ6 642 aa14.75□□□□□ -0.05
CD44-224ENST00000526669 FKBP15Q5T1M5 1219 aa14.75□□□□□ -0.05
CD44-224ENST00000526669 FUT10Q6P4F1 479 aa14.75□□□□□ -0.05
CD44-224ENST00000526669 DSTYKQ6XUX3 929 aa14.75□□□□□ -0.05
CD44-224ENST00000526669 GBP6Q6ZN66 633 aa14.75□□□□□ -0.05
CD44-224ENST00000526669 LRRC52Q8N7C0 313 aa14.75□□□□□ -0.05
CD44-224ENST00000526669 ARNTL2Q8WYA1 636 aa14.75□□□□□ -0.05
CD44-224ENST00000526669 TATDN2Q93075 761 aa14.75□□□□□ -0.05
CD44-224ENST00000526669 TMEM169Q96HH4 297 aa14.75□□□□□ -0.05
CD44-224ENST00000526669 B3GALT6Q96L58 329 aa14.75□□□□□ -0.05
CD44-224ENST00000526669 LSM14BQ9BX40 385 aaKnown RBP14.75□□□□□ -0.05
CD44-224ENST00000526669 VN1R3Q9BXE9 311 aa14.75□□□□□ -0.05
CD44-224ENST00000526669 GPR62Q9BZJ7 368 aa14.75□□□□□ -0.05
CD44-224ENST00000526669 INTS2Q9H0H0 1204 aaKnown RBP14.75□□□□□ -0.05
CD44-224ENST00000526669 XYLT2Q9H1B5 865 aa14.75□□□□□ -0.05
CD44-224ENST00000526669 SLC28A3Q9HAS3 691 aa14.75□□□□□ -0.05
CD44-224ENST00000526669 APOBEC3GQ9HC16 384 aaKnown RBP14.75□□□□□ -0.05
CD44-224ENST00000526669 SPG21Q9NZD8 308 aa14.75□□□□□ -0.05
CD44-224ENST00000526669 NXF1Q9UBU9 619 aaKnown RBP14.75□□□□□ -0.05
CD44-224ENST00000526669 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.75□□□□□ -0.05
CD44-224ENST00000526669 PRRC2BQ5JSZ5 2229 aaKnown RBP14.74□□□□□ -0.05
CD44-224ENST00000526669 A0A1B0GTH6 734 aa14.74□□□□□ -0.05
CD44-224ENST00000526669 TMEM189-UBE2V1I3L0A0 370 aa14.74□□□□□ -0.05
CD44-224ENST00000526669 P4HA2O15460 535 aa14.74□□□□□ -0.05
CD44-224ENST00000526669 FGF18O76093 207 aa14.74□□□□□ -0.05
CD44-224ENST00000526669 RAP1GAPP47736 663 aa14.74□□□□□ -0.05
CD44-224ENST00000526669 ERVK-21P61565 698 aa14.74□□□□□ -0.05
CD44-224ENST00000526669 CETN1Q12798 172 aa14.74□□□□□ -0.05
CD44-224ENST00000526669 MYO1EQ12965 1108 aa14.74□□□□□ -0.05
CD44-224ENST00000526669 EXOC3L4Q17RC7 722 aa14.74□□□□□ -0.05
CD44-224ENST00000526669 LRIT3Q3SXY7 679 aa14.74□□□□□ -0.05
CD44-224ENST00000526669 ZNF667Q5HYK9 610 aa14.74□□□□□ -0.05
CD44-224ENST00000526669 GJB7Q6PEY0 223 aa14.74□□□□□ -0.05
CD44-224ENST00000526669 TAS1R1Q7RTX1 841 aa14.74□□□□□ -0.05
CD44-224ENST00000526669 ARHGEF19Q8IW93 802 aa14.74□□□□□ -0.05
CD44-224ENST00000526669 EHBP1Q8NDI1 1231 aa14.74□□□□□ -0.05
CD44-224ENST00000526669 FBXO22Q8NEZ5 403 aa14.74□□□□□ -0.05
CD44-224ENST00000526669 SENP8Q96LD8 212 aa14.74□□□□□ -0.05
CD44-224ENST00000526669 PCMTD1Q96MG8 357 aaPredicted RBP14.74□□□□□ -0.05
CD44-224ENST00000526669 IMPG2Q9BZV3 1241 aa14.74□□□□□ -0.05
CD44-224ENST00000526669 XPO4Q9C0E2 1151 aaKnown RBP14.74□□□□□ -0.05
CD44-224ENST00000526669 ALG13Q9NP73 1137 aaKnown RBP14.74□□□□□ -0.05
CD44-224ENST00000526669 RTN4Q9NQC3 1192 aaKnown RBP14.74□□□□□ -0.05
CD44-224ENST00000526669 COQ4Q9Y3A0 265 aa14.74□□□□□ -0.05
CD44-224ENST00000526669 TIMM13Q9Y5L4 95 aaPredicted RBP14.74□□□□□ -0.05
CD44-224ENST00000526669 SNX9Q9Y5X1 595 aa14.74□□□□□ -0.05
CD44-224ENST00000526669 EPOPA6NHQ4 379 aa14.73□□□□□ -0.05
CD44-224ENST00000526669 LRRC10BA6NIK2 292 aa14.73□□□□□ -0.05
CD44-224ENST00000526669 KPNA7A9QM74 516 aa14.73□□□□□ -0.05
CD44-224ENST00000526669 CYB561D2O14569 222 aa14.73□□□□□ -0.05
CD44-224ENST00000526669 ASS1P00966 412 aaKnown RBP14.73□□□□□ -0.05
CD44-224ENST00000526669 TKTP29401 623 aaKnown RBP14.73□□□□□ -0.05
CD44-224ENST00000526669 PPM1AP35813 382 aa14.73□□□□□ -0.05
CD44-224ENST00000526669 PNPLA4P41247 253 aa14.73□□□□□ -0.05
CD44-224ENST00000526669 TNNC1P63316 161 aa14.73□□□□□ -0.05
CD44-224ENST00000526669 KCNMA1Q12791 1236 aa14.73□□□□□ -0.05
CD44-224ENST00000526669 SYCP1Q15431 976 aa14.73□□□□□ -0.05
CD44-224ENST00000526669 SGSM1Q2NKQ1 1148 aa14.73□□□□□ -0.05
CD44-224ENST00000526669 WDR72Q3MJ13 1102 aa14.73□□□□□ -0.05
CD44-224ENST00000526669 WDR44Q5JSH3 913 aa14.73□□□□□ -0.05
CD44-224ENST00000526669 FAM171A1Q5VUB5 890 aa14.73□□□□□ -0.05
CD44-224ENST00000526669 CCDC150Q8NCX0 1101 aa14.73□□□□□ -0.05
CD44-224ENST00000526669 LMO3Q8TAP4 145 aa14.73□□□□□ -0.05
CD44-224ENST00000526669 GDPD5Q8WTR4 605 aa14.73□□□□□ -0.05
CD44-224ENST00000526669 MMS19Q96T76 1030 aa14.73□□□□□ -0.05
CD44-224ENST00000526669 SMYD3Q9H7B4 428 aa14.73□□□□□ -0.05
CD44-224ENST00000526669 RWDD3Q9Y3V2 267 aa14.73□□□□□ -0.05
CD44-224ENST00000526669 DOCK6Q96HP0 2047 aa14.73□□□□□ -0.05
CD44-224ENST00000526669 TRANK1O15050 2925 aa14.72□□□□□ -0.05
CD44-224ENST00000526669 SF3B1O75533 1304 aaKnown RBP eCLIP14.72□□□□□ -0.058e-6■■■■■ 107
CD44-224ENST00000526669 RFXAPO00287 272 aa14.72□□□□□ -0.05
CD44-224ENST00000526669 PMM2O15305 246 aa14.72□□□□□ -0.05
CD44-224ENST00000526669 PON1P27169 355 aa14.72□□□□□ -0.05
CD44-224ENST00000526669 ATICP31939 592 aa14.72□□□□□ -0.05
CD44-224ENST00000526669 CA8P35219 290 aa14.72□□□□□ -0.05
CD44-224ENST00000526669 GPM6BQ13491 265 aa14.72□□□□□ -0.05
CD44-224ENST00000526669 CEP57Q86XR8 500 aa14.72□□□□□ -0.05
CD44-224ENST00000526669 AUTS2Q8WXX7 1259 aa14.72□□□□□ -0.05
CD44-224ENST00000526669 KAT5Q92993 513 aa14.72□□□□□ -0.05
CD44-224ENST00000526669 LRCH3Q96II8 777 aa14.72□□□□□ -0.05
CD44-224ENST00000526669 SUSD3Q96L08 255 aa14.72□□□□□ -0.05
CD44-224ENST00000526669 SAMD11Q96NU1 681 aa14.72□□□□□ -0.05
CD44-224ENST00000526669 NT5C1BQ96P26 610 aa14.72□□□□□ -0.05
CD44-224ENST00000526669 HERC2P3Q9BVR0 1158 aa14.72□□□□□ -0.05
CD44-224ENST00000526669 SIX2Q9NPC8 291 aa14.72□□□□□ -0.05
CD44-224ENST00000526669 AJAP1Q9UKB5 411 aaPredicted RBP14.72□□□□□ -0.05
CD44-224ENST00000526669 L1RE1Q9UN81 338 aa14.72□□□□□ -0.05
CD44-224ENST00000526669 ZNF638Q14966 1978 aaKnown RBP14.72□□□□□ -0.05
CD44-224ENST00000526669 GTPBP10A4D1E9 387 aaKnown RBP14.71□□□□□ -0.05
CD44-224ENST00000526669 C2CD2LO14523 706 aa14.71□□□□□ -0.05
CD44-224ENST00000526669 GRM6O15303 877 aa14.71□□□□□ -0.05
CD44-224ENST00000526669 HCRTO43612 131 aa14.71□□□□□ -0.05
CD44-224ENST00000526669 STAU1O95793 577 aaKnown RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms