RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 KLRC2P26717 231 aa16.31■□□□□ 0.2
SF3B2-202ENST00000524475 CA8P35219 290 aa16.31■□□□□ 0.2
SF3B2-202ENST00000524475 RBP5P82980 135 aa16.31■□□□□ 0.2
SF3B2-202ENST00000524475 DLX2Q07687 328 aaPredicted RBP16.31■□□□□ 0.2
SF3B2-202ENST00000524475 VARS2Q5ST30 1063 aaKnown RBP16.31■□□□□ 0.2
SF3B2-202ENST00000524475 SLC8B1Q6J4K2 584 aa16.31■□□□□ 0.2
SF3B2-202ENST00000524475 INTS8Q75QN2 995 aaKnown RBP16.31■□□□□ 0.2
SF3B2-202ENST00000524475 RDH13Q8NBN7 331 aa16.31■□□□□ 0.2
SF3B2-202ENST00000524475 SMRP1Q8NCR6 262 aa16.31■□□□□ 0.2
SF3B2-202ENST00000524475 BORCS6Q96GS4 357 aa16.31■□□□□ 0.2
SF3B2-202ENST00000524475 TSG101Q99816 390 aa16.31■□□□□ 0.2
SF3B2-202ENST00000524475 CLSTN3Q9BQT9 956 aa16.31■□□□□ 0.2
SF3B2-202ENST00000524475 SIX4Q9UIU6 781 aa16.31■□□□□ 0.2
SF3B2-202ENST00000524475 PLXNA3P51805 1871 aa16.31■□□□□ 0.2
SF3B2-202ENST00000524475 H7C4K7 107 aa16.3■□□□□ 0.2
SF3B2-202ENST00000524475 I3L4J1 428 aa16.3■□□□□ 0.2
SF3B2-202ENST00000524475 IKBKBO14920 756 aa16.3■□□□□ 0.2
SF3B2-202ENST00000524475 OAZ2O95190 189 aa16.3■□□□□ 0.2
SF3B2-202ENST00000524475 MBD3O95983 291 aa16.3■□□□□ 0.2
SF3B2-202ENST00000524475 ITGB3P05106 788 aa16.3■□□□□ 0.2
SF3B2-202ENST00000524475 DLATP10515 647 aaKnown RBP16.3■□□□□ 0.2
SF3B2-202ENST00000524475 ODC1P11926 461 aa16.3■□□□□ 0.2
SF3B2-202ENST00000524475 POLR2BP30876 1174 aaKnown RBP16.3■□□□□ 0.2
SF3B2-202ENST00000524475 PSMC2P35998 433 aaKnown RBP16.3■□□□□ 0.2
SF3B2-202ENST00000524475 CASP4P49662 377 aa16.3■□□□□ 0.2
SF3B2-202ENST00000524475 FKBP3Q00688 224 aaKnown RBP16.3■□□□□ 0.2
SF3B2-202ENST00000524475 ADAM9Q13443 819 aa16.3■□□□□ 0.2
SF3B2-202ENST00000524475 RAB33AQ14088 237 aa16.3■□□□□ 0.2
SF3B2-202ENST00000524475 SV2CQ496J9 727 aa16.3■□□□□ 0.2
SF3B2-202ENST00000524475 ANKRD54Q6NXT1 300 aa16.3■□□□□ 0.2
SF3B2-202ENST00000524475 LILRA6Q6PI73 481 aa16.3■□□□□ 0.2
SF3B2-202ENST00000524475 ELMSAN1Q6PJG2 1045 aa16.3■□□□□ 0.2
SF3B2-202ENST00000524475 PRSS55Q6UWB4 352 aaPredicted RBP16.3■□□□□ 0.2
SF3B2-202ENST00000524475 RTL10Q7L3V2 364 aa16.3■□□□□ 0.2
SF3B2-202ENST00000524475 CEP57Q86XR8 500 aa16.3■□□□□ 0.2
SF3B2-202ENST00000524475 TMEM130Q8N3G9 435 aa16.3■□□□□ 0.2
SF3B2-202ENST00000524475 OR5B17Q8NGF7 314 aa16.3■□□□□ 0.2
SF3B2-202ENST00000524475 SPATA18Q8TC71 538 aa16.3■□□□□ 0.2
SF3B2-202ENST00000524475 PLEKHO2Q8TD55 490 aa16.3■□□□□ 0.2
SF3B2-202ENST00000524475 ASB2Q96Q27 587 aa16.3■□□□□ 0.2
SF3B2-202ENST00000524475 RHOBTB2Q9BYZ6 727 aa16.3■□□□□ 0.2
SF3B2-202ENST00000524475 NUP62CLQ9H1M0 184 aa16.3■□□□□ 0.2
SF3B2-202ENST00000524475 PLEKHA4Q9H4M7 779 aa16.3■□□□□ 0.2
SF3B2-202ENST00000524475 GDAP2Q9NXN4 497 aa16.3■□□□□ 0.2
SF3B2-202ENST00000524475 DSEQ9UL01 958 aa16.3■□□□□ 0.2
SF3B2-202ENST00000524475 NCOR1O75376 2440 aa16.3■□□□□ 0.2
SF3B2-202ENST00000524475 PPP1R3GB7ZBB8 358 aa16.29■□□□□ 0.2
SF3B2-202ENST00000524475 CETN3O15182 167 aa16.29■□□□□ 0.2
SF3B2-202ENST00000524475 SPTLC1O15269 473 aa16.29■□□□□ 0.2
SF3B2-202ENST00000524475 SLC16A3O15427 465 aaKnown RBP16.29■□□□□ 0.2
SF3B2-202ENST00000524475 AKAP3O75969 853 aa16.29■□□□□ 0.2
SF3B2-202ENST00000524475 STAU1O95793 577 aaKnown RBP16.29■□□□□ 0.2
SF3B2-202ENST00000524475 GLUD1P00367 558 aa16.29■□□□□ 0.2
SF3B2-202ENST00000524475 CD44P16070 742 aaKnown RBP16.29■□□□□ 0.2
SF3B2-202ENST00000524475 TNNI1P19237 187 aa16.29■□□□□ 0.2
SF3B2-202ENST00000524475 TFF2Q03403 129 aa16.29■□□□□ 0.2
SF3B2-202ENST00000524475 SMAD4Q13485 552 aaKnown RBP16.29■□□□□ 0.2
SF3B2-202ENST00000524475 CAMK4Q16566 473 aa16.29■□□□□ 0.2
SF3B2-202ENST00000524475 CEP135Q66GS9 1140 aa16.29■□□□□ 0.2
SF3B2-202ENST00000524475 ZNF280DQ6N043 979 aa16.29■□□□□ 0.2
SF3B2-202ENST00000524475 DSTYKQ6XUX3 929 aa16.29■□□□□ 0.2
SF3B2-202ENST00000524475 TRAPPC11Q7Z392 1133 aa16.29■□□□□ 0.2
SF3B2-202ENST00000524475 CSGALNACT2Q8N6G5 542 aa16.29■□□□□ 0.2
SF3B2-202ENST00000524475 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.29■□□□□ 0.2
SF3B2-202ENST00000524475 GPT2Q8TD30 523 aa16.29■□□□□ 0.2
SF3B2-202ENST00000524475 CCDC127Q96BQ5 260 aa16.29■□□□□ 0.2
SF3B2-202ENST00000524475 SENP8Q96LD8 212 aa16.29■□□□□ 0.2
SF3B2-202ENST00000524475 CD207Q9UJ71 328 aa16.29■□□□□ 0.2
SF3B2-202ENST00000524475 BARX2Q9UMQ3 279 aaPredicted RBP16.29■□□□□ 0.2
SF3B2-202ENST00000524475 AGAP1Q9UPQ3 857 aa16.29■□□□□ 0.2
SF3B2-202ENST00000524475 FAM50BQ9Y247 325 aa16.29■□□□□ 0.2
SF3B2-202ENST00000524475 TTC28Q96AY4 2481 aa16.28■□□□□ 0.2
SF3B2-202ENST00000524475 BICDL2A1A5D9 508 aa16.28■□□□□ 0.2
SF3B2-202ENST00000524475 LRRIQ3A6PVS8 624 aaPredicted RBP16.28■□□□□ 0.2
SF3B2-202ENST00000524475 KPNA7A9QM74 516 aa16.28■□□□□ 0.2
SF3B2-202ENST00000524475 H3BQ06 376 aaPredicted RBP16.28■□□□□ 0.2
SF3B2-202ENST00000524475 EPCAMP16422 314 aa16.28■□□□□ 0.2
SF3B2-202ENST00000524475 RBM10P98175 930 aaKnown RBP16.28■□□□□ 0.2
SF3B2-202ENST00000524475 YWHAHQ04917 246 aaPredicted RBP16.28■□□□□ 0.2
SF3B2-202ENST00000524475 MYO1EQ12965 1108 aa16.28■□□□□ 0.2
SF3B2-202ENST00000524475 TJAP1Q5JTD0 557 aa16.28■□□□□ 0.2
SF3B2-202ENST00000524475 LMBRD2Q68DH5 695 aaPredicted RBP16.28■□□□□ 0.2
SF3B2-202ENST00000524475 ANKRD40Q6AI12 368 aa16.28■□□□□ 0.2
SF3B2-202ENST00000524475 SYCE2Q6PIF2 218 aa16.28■□□□□ 0.2
SF3B2-202ENST00000524475 CYP26C1Q6V0L0 522 aa16.28■□□□□ 0.2
SF3B2-202ENST00000524475 RBM43Q6ZSC3 357 aaKnown RBP16.28■□□□□ 0.2
SF3B2-202ENST00000524475 FAM186BQ8IYM0 893 aa16.28■□□□□ 0.2
SF3B2-202ENST00000524475 CMASQ8NFW8 434 aaPredicted RBP16.28■□□□□ 0.2
SF3B2-202ENST00000524475 CEP63Q96MT8 703 aa16.28■□□□□ 0.2
SF3B2-202ENST00000524475 VRTNQ9H8Y1 702 aa16.28■□□□□ 0.2
SF3B2-202ENST00000524475 MAFFQ9ULX9 164 aa16.28■□□□□ 0.2
SF3B2-202ENST00000524475 C5orf42Q9H799 3197 aa16.28■□□□□ 0.2
SF3B2-202ENST00000524475 GRXCR2A6NFK2 248 aa16.27■□□□□ 0.2
SF3B2-202ENST00000524475 OR6C75A6NL08 312 aa16.27■□□□□ 0.2
SF3B2-202ENST00000524475 BIN1O00499 593 aa16.27■□□□□ 0.2
SF3B2-202ENST00000524475 TGM5O43548 720 aa16.27■□□□□ 0.2
SF3B2-202ENST00000524475 EPB41P11171 864 aaKnown RBP16.27■□□□□ 0.2
SF3B2-202ENST00000524475 RPL17P18621 184 aaKnown RBP16.27■□□□□ 0.2
SF3B2-202ENST00000524475 PMS1P54277 932 aaKnown RBP16.27■□□□□ 0.2
SF3B2-202ENST00000524475 ITIH3Q06033 890 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms