RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-222ENST00000524006 DNAI2Q9GZS0 605 aa11.48□□□□□ -0.57
SPIDR-222ENST00000524006 DDX47Q9H0S4 455 aaKnown RBP11.48□□□□□ -0.57
SPIDR-222ENST00000524006 ABHD16BQ9H3Z7 469 aa11.48□□□□□ -0.57
SPIDR-222ENST00000524006 GDF3Q9NR23 364 aa11.48□□□□□ -0.57
SPIDR-222ENST00000524006 ST7Q9NRC1 585 aa11.48□□□□□ -0.57
SPIDR-222ENST00000524006 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.48□□□□□ -0.574e-7■■■■■ 38.1
SPIDR-222ENST00000524006 ADAM22Q9P0K1 906 aa11.48□□□□□ -0.57
SPIDR-222ENST00000524006 DMGDHQ9UI17 866 aaKnown RBP11.48□□□□□ -0.57
SPIDR-222ENST00000524006 CPSF3Q9UKF6 684 aaKnown RBP11.48□□□□□ -0.57
SPIDR-222ENST00000524006 TTC7AQ9ULT0 858 aaPredicted RBP11.48□□□□□ -0.57
SPIDR-222ENST00000524006 NFU1Q9UMS0 254 aa11.48□□□□□ -0.57
SPIDR-222ENST00000524006 COG5Q9UP83 839 aa11.48□□□□□ -0.57
SPIDR-222ENST00000524006 PTPRJQ12913 1337 aa11.48□□□□□ -0.57
SPIDR-222ENST00000524006 RBM47A0AV96 593 aaKnown RBP11.47□□□□□ -0.57
SPIDR-222ENST00000524006 FAM187AA6NFU0 413 aa11.47□□□□□ -0.57
SPIDR-222ENST00000524006 GOLGA8KD6RF30 607 aa11.47□□□□□ -0.57
SPIDR-222ENST00000524006 H3BRB1 525 aa11.47□□□□□ -0.57
SPIDR-222ENST00000524006 MYO1FO00160 1098 aa11.47□□□□□ -0.57
SPIDR-222ENST00000524006 PHF2O75151 1096 aa11.47□□□□□ -0.57
SPIDR-222ENST00000524006 LSM8O95777 96 aaKnown RBP11.47□□□□□ -0.57
SPIDR-222ENST00000524006 ASS1P00966 412 aaKnown RBP11.47□□□□□ -0.57
SPIDR-222ENST00000524006 CD19P15391 556 aa11.47□□□□□ -0.57
SPIDR-222ENST00000524006 CHRNA3P32297 505 aa11.47□□□□□ -0.57
SPIDR-222ENST00000524006 MAN1A1P33908 653 aa11.47□□□□□ -0.57
SPIDR-222ENST00000524006 CTNNA1P35221 906 aaKnown RBP11.47□□□□□ -0.57
SPIDR-222ENST00000524006 AARSP49588 968 aaKnown RBP eCLIP11.47□□□□□ -0.57
SPIDR-222ENST00000524006 GUCY2FP51841 1108 aa11.47□□□□□ -0.57
SPIDR-222ENST00000524006 LACTBP83111 547 aaPredicted RBP11.47□□□□□ -0.57
SPIDR-222ENST00000524006 CENPCQ03188 943 aa11.47□□□□□ -0.57
SPIDR-222ENST00000524006 POU5F1BQ06416 359 aa11.47□□□□□ -0.57
SPIDR-222ENST00000524006 GRB14Q14449 540 aa11.47□□□□□ -0.57
SPIDR-222ENST00000524006 GRIK4Q16099 956 aa11.47□□□□□ -0.57
SPIDR-222ENST00000524006 DCAF4L1Q3SXM0 396 aa11.47□□□□□ -0.57
SPIDR-222ENST00000524006 IQSEC1Q6DN90 963 aa11.47□□□□□ -0.57
SPIDR-222ENST00000524006 SMYD5Q6GMV2 418 aa11.47□□□□□ -0.57
SPIDR-222ENST00000524006 ADAT2Q7Z6V5 191 aaKnown RBP11.47□□□□□ -0.57
SPIDR-222ENST00000524006 CCDC50Q8IVM0 306 aa11.47□□□□□ -0.57
SPIDR-222ENST00000524006 MCOLN2Q8IZK6 566 aa11.47□□□□□ -0.57
SPIDR-222ENST00000524006 EIF1ADQ8N9N8 165 aaKnown RBP11.47□□□□□ -0.57
SPIDR-222ENST00000524006 TMEM35BQ8NCS4 154 aa11.47□□□□□ -0.57
SPIDR-222ENST00000524006 HDAC7Q8WUI4 952 aa11.47□□□□□ -0.57
SPIDR-222ENST00000524006 ELMO3Q96BJ8 720 aa11.47□□□□□ -0.57
SPIDR-222ENST00000524006 MAML3Q96JK9 1138 aa11.47□□□□□ -0.57
SPIDR-222ENST00000524006 FAM84AQ96KN4 292 aa11.47□□□□□ -0.57
SPIDR-222ENST00000524006 HAPLN2Q9GZV7 340 aa11.47□□□□□ -0.57
SPIDR-222ENST00000524006 CDT1Q9H211 546 aa11.47□□□□□ -0.57
SPIDR-222ENST00000524006 PLEKHA4Q9H4M7 779 aa11.47□□□□□ -0.57
SPIDR-222ENST00000524006 TUT1Q9H6E5 874 aaKnown RBP11.47□□□□□ -0.57
SPIDR-222ENST00000524006 ACP6Q9NPH0 428 aa11.47□□□□□ -0.57
SPIDR-222ENST00000524006 PARP2Q9UGN5 583 aa11.47□□□□□ -0.57
SPIDR-222ENST00000524006 ESYT3A0FGR9 886 aa11.46□□□□□ -0.57
SPIDR-222ENST00000524006 RRN3P2A6NIE6 340 aa11.46□□□□□ -0.57
SPIDR-222ENST00000524006 SART1O43290 800 aaKnown RBP11.46□□□□□ -0.57
SPIDR-222ENST00000524006 RNF40O75150 1001 aa11.46□□□□□ -0.57
SPIDR-222ENST00000524006 PPFIA4O75335 1185 aa11.46□□□□□ -0.57
SPIDR-222ENST00000524006 EDN1P05305 212 aa11.46□□□□□ -0.57
SPIDR-222ENST00000524006 MMP3P08254 477 aa11.46□□□□□ -0.57
SPIDR-222ENST00000524006 CXCL8P10145 99 aa11.46□□□□□ -0.57
SPIDR-222ENST00000524006 GJC1P36383 396 aa11.46□□□□□ -0.57
SPIDR-222ENST00000524006 MYL6P60660 151 aa11.46□□□□□ -0.57
SPIDR-222ENST00000524006 CDC42EP1Q00587 391 aa11.46□□□□□ -0.57
SPIDR-222ENST00000524006 TAP1Q03518 808 aa11.46□□□□□ -0.57
SPIDR-222ENST00000524006 ACVR2BQ13705 512 aa11.46□□□□□ -0.57
SPIDR-222ENST00000524006 TMEM132DQ14C87 1099 aa11.46□□□□□ -0.57
SPIDR-222ENST00000524006 FAM187BQ17R55 369 aa11.46□□□□□ -0.57
SPIDR-222ENST00000524006 DUSP28Q4G0W2 176 aa11.46□□□□□ -0.57
SPIDR-222ENST00000524006 GJC2Q5T442 439 aaPredicted RBP11.46□□□□□ -0.57
SPIDR-222ENST00000524006 TAPT1Q6NXT6 567 aa11.46□□□□□ -0.57
SPIDR-222ENST00000524006 DNAJC24Q6P3W2 148 aa11.46□□□□□ -0.57
SPIDR-222ENST00000524006 ZNF410Q86VK4 478 aa11.46□□□□□ -0.57
SPIDR-222ENST00000524006 CASKIN2Q8WXE0 1202 aa11.46□□□□□ -0.57
SPIDR-222ENST00000524006 CPA5Q8WXQ8 436 aa11.46□□□□□ -0.57
SPIDR-222ENST00000524006 DDX1Q92499 740 aaKnown RBP11.46□□□□□ -0.57
SPIDR-222ENST00000524006 VCPIP1Q96JH7 1222 aa11.46□□□□□ -0.57
SPIDR-222ENST00000524006 ZNF333Q96JL9 665 aa11.46□□□□□ -0.57
SPIDR-222ENST00000524006 HINFPQ9BQA5 517 aa11.46□□□□□ -0.57
SPIDR-222ENST00000524006 TINF2Q9BSI4 451 aa11.46□□□□□ -0.57
SPIDR-222ENST00000524006 FZD8Q9H461 694 aa11.46□□□□□ -0.57
SPIDR-222ENST00000524006 SYNCQ9H7C4 482 aa11.46□□□□□ -0.57
SPIDR-222ENST00000524006 NXF1Q9UBU9 619 aaKnown RBP11.46□□□□□ -0.57
SPIDR-222ENST00000524006 MTRF1LQ9UGC7 380 aaKnown RBP11.46□□□□□ -0.57
SPIDR-222ENST00000524006 TMEM59LQ9UK28 342 aa11.46□□□□□ -0.57
SPIDR-222ENST00000524006 STRIP2Q9ULQ0 834 aa11.46□□□□□ -0.57
SPIDR-222ENST00000524006 NUB1Q9Y5A7 615 aa11.46□□□□□ -0.57
SPIDR-222ENST00000524006 LAMA3Q16787 3333 aa11.45□□□□□ -0.58
SPIDR-222ENST00000524006 UMODL1Q5DID0 1318 aa11.45□□□□□ -0.58
SPIDR-222ENST00000524006 A0A087WZ62 844 aa11.45□□□□□ -0.58
SPIDR-222ENST00000524006 GOLGA6CA6NDK9 693 aa11.45□□□□□ -0.58
SPIDR-222ENST00000524006 H3BQF6 201 aa11.45□□□□□ -0.58
SPIDR-222ENST00000524006 B4GALT5O43286 388 aa11.45□□□□□ -0.58
SPIDR-222ENST00000524006 PSTPIP1O43586 416 aa11.45□□□□□ -0.58
SPIDR-222ENST00000524006 B4GALT4O60513 344 aa11.45□□□□□ -0.58
SPIDR-222ENST00000524006 VTNP04004 478 aa11.45□□□□□ -0.58
SPIDR-222ENST00000524006 GJB1P08034 283 aa11.45□□□□□ -0.58
SPIDR-222ENST00000524006 GLI1P08151 1106 aa11.45□□□□□ -0.58
SPIDR-222ENST00000524006 GOLGA6DP0CG33 693 aa11.45□□□□□ -0.58
SPIDR-222ENST00000524006 MYBL2P10244 700 aa11.45□□□□□ -0.58
SPIDR-222ENST00000524006 DESP17661 470 aa11.45□□□□□ -0.58
SPIDR-222ENST00000524006 PROZP22891 400 aa11.45□□□□□ -0.58
SPIDR-222ENST00000524006 POLR2BP30876 1174 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms