RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 CEBPBP17676 345 aa9.61□□□□□ -0.87
CTNNA1-240ENST00000523912 SYT1P21579 422 aa9.61□□□□□ -0.87
CTNNA1-240ENST00000523912 IGFBP6P24592 240 aaPredicted RBP9.61□□□□□ -0.87
CTNNA1-240ENST00000523912 NMT1P30419 496 aaKnown RBP9.61□□□□□ -0.87
CTNNA1-240ENST00000523912 TNFSF9P41273 254 aa9.61□□□□□ -0.87
CTNNA1-240ENST00000523912 MAGEA9P43362 315 aa9.61□□□□□ -0.87
CTNNA1-240ENST00000523912 AARSP49588 968 aaKnown RBP eCLIP9.61□□□□□ -0.87
CTNNA1-240ENST00000523912 EPHB3P54753 998 aa9.61□□□□□ -0.87
CTNNA1-240ENST00000523912 GPC5P78333 572 aa9.61□□□□□ -0.87
CTNNA1-240ENST00000523912 POU5F1Q01860 360 aaKnown RBP9.61□□□□□ -0.87
CTNNA1-240ENST00000523912 CEBPZQ03701 1054 aaKnown RBP9.61□□□□□ -0.87
CTNNA1-240ENST00000523912 GRIN1Q05586 938 aa9.61□□□□□ -0.87
CTNNA1-240ENST00000523912 TWF1Q12792 350 aa9.61□□□□□ -0.87
CTNNA1-240ENST00000523912 RESTQ13127 1097 aa9.61□□□□□ -0.87
CTNNA1-240ENST00000523912 ALCAMQ13740 583 aa9.61□□□□□ -0.87
CTNNA1-240ENST00000523912 MYBPC2Q14324 1141 aa9.61□□□□□ -0.87
CTNNA1-240ENST00000523912 MLF2Q15773 248 aaPredicted RBP9.61□□□□□ -0.87
CTNNA1-240ENST00000523912 SPECC1Q5M775 1068 aa9.61□□□□□ -0.87
CTNNA1-240ENST00000523912 ZBTB41Q5SVQ8 909 aa9.61□□□□□ -0.87
CTNNA1-240ENST00000523912 SPATA1Q5VX52 437 aa9.61□□□□□ -0.87
CTNNA1-240ENST00000523912 OVOS1Q6IE37 1185 aa9.61□□□□□ -0.87
CTNNA1-240ENST00000523912 JADE1Q6IE81 842 aa9.61□□□□□ -0.87
CTNNA1-240ENST00000523912 STXBP4Q6ZWJ1 553 aa9.61□□□□□ -0.87
CTNNA1-240ENST00000523912 METTL23Q86XA0 190 aa9.61□□□□□ -0.87
CTNNA1-240ENST00000523912 SFR1Q86XK3 245 aa9.61□□□□□ -0.87
CTNNA1-240ENST00000523912 POMGNT1Q8WZA1 660 aa9.61□□□□□ -0.87
CTNNA1-240ENST00000523912 EPSTI1Q96J88 318 aa9.61□□□□□ -0.87
CTNNA1-240ENST00000523912 ACCSQ96QU6 501 aa9.61□□□□□ -0.87
CTNNA1-240ENST00000523912 BCO2Q9BYV7 579 aa9.61□□□□□ -0.87
CTNNA1-240ENST00000523912 LRRC27Q9C0I9 530 aa9.61□□□□□ -0.87
CTNNA1-240ENST00000523912 SLITRK6Q9H5Y7 841 aa9.61□□□□□ -0.87
CTNNA1-240ENST00000523912 FBXO2Q9UK22 296 aaPredicted RBP9.61□□□□□ -0.87
CTNNA1-240ENST00000523912 CPSF3Q9UKF6 684 aaKnown RBP9.61□□□□□ -0.87
CTNNA1-240ENST00000523912 AGO2Q9UKV8 859 aaKnown RBP9.61□□□□□ -0.87
CTNNA1-240ENST00000523912 MRPS17Q9Y2R5 130 aaKnown RBP9.61□□□□□ -0.87
CTNNA1-240ENST00000523912 C2CD2Q9Y426 696 aa9.61□□□□□ -0.87
CTNNA1-240ENST00000523912 YIPF1Q9Y548 306 aa9.61□□□□□ -0.87
CTNNA1-240ENST00000523912 CLIC4Q9Y696 253 aa9.61□□□□□ -0.87
CTNNA1-240ENST00000523912 MORC2Q9Y6X9 1032 aaPredicted RBP9.61□□□□□ -0.87
CTNNA1-240ENST00000523912 F5P12259 2224 aa9.6□□□□□ -0.87
CTNNA1-240ENST00000523912 KANSL1LA0AUZ9 987 aa9.6□□□□□ -0.87
CTNNA1-240ENST00000523912 TULP1O00294 542 aaPredicted RBP9.6□□□□□ -0.87
CTNNA1-240ENST00000523912 STX6O43752 255 aa9.6□□□□□ -0.87
CTNNA1-240ENST00000523912 FAM189A1O60320 539 aa9.6□□□□□ -0.87
CTNNA1-240ENST00000523912 GCNT3O95395 438 aa9.6□□□□□ -0.87
CTNNA1-240ENST00000523912 FGF19O95750 216 aa9.6□□□□□ -0.87
CTNNA1-240ENST00000523912 HSP90AA1P07900 732 aaKnown RBP9.6□□□□□ -0.87
CTNNA1-240ENST00000523912 NFICP08651 508 aa9.6□□□□□ -0.87
CTNNA1-240ENST00000523912 IDEP14735 1019 aa9.6□□□□□ -0.87
CTNNA1-240ENST00000523912 ALDH1A3P47895 512 aa9.6□□□□□ -0.87
CTNNA1-240ENST00000523912 PUM1Q14671 1186 aaKnown RBP eCLIP9.6□□□□□ -0.879e-7■□□□□ 9.3
CTNNA1-240ENST00000523912 UBXN2BQ14CS0 331 aa9.6□□□□□ -0.87
CTNNA1-240ENST00000523912 VEPH1Q14D04 833 aa9.6□□□□□ -0.87
CTNNA1-240ENST00000523912 STK38Q15208 465 aa9.6□□□□□ -0.87
CTNNA1-240ENST00000523912 PTPAQ15257 358 aa9.6□□□□□ -0.87
CTNNA1-240ENST00000523912 ZBTB6Q15916 424 aa9.6□□□□□ -0.87
CTNNA1-240ENST00000523912 SLC5A9Q2M3M2 681 aa9.6□□□□□ -0.87
CTNNA1-240ENST00000523912 C9orf57Q5W0N0 161 aa9.6□□□□□ -0.87
CTNNA1-240ENST00000523912 DYMQ7RTS9 669 aa9.6□□□□□ -0.87
CTNNA1-240ENST00000523912 ITIH5Q86UX2 942 aa9.6□□□□□ -0.87
CTNNA1-240ENST00000523912 NT5DC4Q86YG4 428 aa9.6□□□□□ -0.87
CTNNA1-240ENST00000523912 SYCP3Q8IZU3 236 aa9.6□□□□□ -0.87
CTNNA1-240ENST00000523912 ST13P5Q8NFI4 369 aaPredicted RBP9.6□□□□□ -0.87
CTNNA1-240ENST00000523912 PJA1Q8NG27 643 aa9.6□□□□□ -0.87
CTNNA1-240ENST00000523912 LRRC15Q8TF66 581 aa9.6□□□□□ -0.87
CTNNA1-240ENST00000523912 DNASE1L2Q92874 299 aa9.6□□□□□ -0.87
CTNNA1-240ENST00000523912 ELSPBP1Q96BH3 223 aa9.6□□□□□ -0.87
CTNNA1-240ENST00000523912 MCRS1Q96EZ8 462 aa9.6□□□□□ -0.87
CTNNA1-240ENST00000523912 ZNF560Q96MR9 790 aa9.6□□□□□ -0.87
CTNNA1-240ENST00000523912 ZNF396Q96N95 335 aaPredicted RBP9.6□□□□□ -0.87
CTNNA1-240ENST00000523912 GCNAQ96QF7 691 aa9.6□□□□□ -0.87
CTNNA1-240ENST00000523912 HAPLN2Q9GZV7 340 aa9.6□□□□□ -0.87
CTNNA1-240ENST00000523912 ZFP14Q9HCL3 533 aa9.6□□□□□ -0.87
CTNNA1-240ENST00000523912 DLGAP2Q9P1A6 1054 aa9.6□□□□□ -0.87
CTNNA1-240ENST00000523912 PCDHB13Q9Y5F0 798 aa9.6□□□□□ -0.87
CTNNA1-240ENST00000523912 TIMM13Q9Y5L4 95 aaPredicted RBP9.6□□□□□ -0.87
CTNNA1-240ENST00000523912 VWA8A3KMH1 1905 aa9.6□□□□□ -0.87
CTNNA1-240ENST00000523912 MTCL1Q9Y4B5 1905 aaKnown RBP9.6□□□□□ -0.87
CTNNA1-240ENST00000523912 CITO14578 2027 aa9.6□□□□□ -0.87
CTNNA1-240ENST00000523912 CEP250Q9BV73 2442 aa9.59□□□□□ -0.87
CTNNA1-240ENST00000523912 NCAM2O15394 837 aa9.59□□□□□ -0.87
CTNNA1-240ENST00000523912 SEC24AO95486 1093 aa9.59□□□□□ -0.87
CTNNA1-240ENST00000523912 ADRB2P07550 413 aa9.59□□□□□ -0.87
CTNNA1-240ENST00000523912 DCNP07585 359 aaKnown RBP9.59□□□□□ -0.87
CTNNA1-240ENST00000523912 MYL4P12829 197 aa9.59□□□□□ -0.87
CTNNA1-240ENST00000523912 PDIA4P13667 645 aaKnown RBP9.59□□□□□ -0.87
CTNNA1-240ENST00000523912 PNPLA4P41247 253 aa9.59□□□□□ -0.87
CTNNA1-240ENST00000523912 ACOT2P49753 483 aa9.59□□□□□ -0.87
CTNNA1-240ENST00000523912 TAF6P49848 677 aa9.59□□□□□ -0.87
CTNNA1-240ENST00000523912 GUCY2FP51841 1108 aa9.59□□□□□ -0.87
CTNNA1-240ENST00000523912 STARD6P59095 220 aa9.59□□□□□ -0.87
CTNNA1-240ENST00000523912 LILRA4P59901 499 aa9.59□□□□□ -0.87
CTNNA1-240ENST00000523912 SMARCB1Q12824 385 aa9.59□□□□□ -0.87
CTNNA1-240ENST00000523912 GPR17Q13304 367 aa9.59□□□□□ -0.87
CTNNA1-240ENST00000523912 SNW1Q13573 536 aaKnown RBP9.59□□□□□ -0.87
CTNNA1-240ENST00000523912 SLC39A14Q15043 492 aa9.59□□□□□ -0.87
CTNNA1-240ENST00000523912 ZNF528Q3MIS6 628 aa9.59□□□□□ -0.87
CTNNA1-240ENST00000523912 SV2CQ496J9 727 aa9.59□□□□□ -0.87
CTNNA1-240ENST00000523912 ZC2HC1CQ53FD0 456 aaPredicted RBP9.59□□□□□ -0.87
CTNNA1-240ENST00000523912 SLC44A4Q53GD3 710 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms