RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 VPS28Q9UK41 221 aa8.87□□□□□ -0.99
CSMD1-213ENST00000523488 ASAP1Q9ULH1 1129 aa8.87□□□□□ -0.99
CSMD1-213ENST00000523488 SORCS3Q9UPU3 1222 aa8.87□□□□□ -0.99
CSMD1-213ENST00000523488 GSTTP1A0A1W2PQM5 241 aa8.87□□□□□ -0.99
CSMD1-213ENST00000523488 CYTH3O43739 400 aa8.87□□□□□ -0.99
CSMD1-213ENST00000523488 CBX6O95503 412 aa8.87□□□□□ -0.99
CSMD1-213ENST00000523488 GJA8P48165 433 aa8.87□□□□□ -0.99
CSMD1-213ENST00000523488 NEK3P51956 506 aa8.87□□□□□ -0.99
CSMD1-213ENST00000523488 COASYQ13057 564 aa8.87□□□□□ -0.99
CSMD1-213ENST00000523488 R3HDM1Q15032 1099 aaKnown RBP8.87□□□□□ -0.99
CSMD1-213ENST00000523488 SEPT7Q16181 437 aaKnown RBP8.87□□□□□ -0.99
CSMD1-213ENST00000523488 OTOAQ7RTW8 1153 aa8.87□□□□□ -0.99
CSMD1-213ENST00000523488 SPATA24Q86W54 205 aa8.87□□□□□ -0.99
CSMD1-213ENST00000523488 CCDC65Q8IXS2 484 aa8.87□□□□□ -0.99
CSMD1-213ENST00000523488 SPIRE2Q8WWL2 714 aa8.87□□□□□ -0.99
CSMD1-213ENST00000523488 MPP4Q96JB8 637 aa8.87□□□□□ -0.99
CSMD1-213ENST00000523488 AGBL1Q96MI9 1066 aa8.87□□□□□ -0.99
CSMD1-213ENST00000523488 CCDC77Q9BR77 488 aa8.87□□□□□ -0.99
CSMD1-213ENST00000523488 MKNK1Q9BUB5 465 aa8.87□□□□□ -0.99
CSMD1-213ENST00000523488 CCDC106Q9BWC9 280 aa8.87□□□□□ -0.99
CSMD1-213ENST00000523488 ARMT1Q9H993 441 aa8.87□□□□□ -0.99
CSMD1-213ENST00000523488 IL17RBQ9NRM6 502 aa8.87□□□□□ -0.99
CSMD1-213ENST00000523488 TAS2R1Q9NYW7 299 aa8.87□□□□□ -0.99
CSMD1-213ENST00000523488 PPP1R1BQ9UD71 204 aaPredicted RBP8.87□□□□□ -0.99
CSMD1-213ENST00000523488 ANGPTL2Q9UKU9 493 aa8.87□□□□□ -0.99
CSMD1-213ENST00000523488 KIAA1024Q9UPX6 916 aa8.87□□□□□ -0.99
CSMD1-213ENST00000523488 RTCBQ9Y3I0 505 aaKnown RBP8.87□□□□□ -0.99
CSMD1-213ENST00000523488 H3BNX3 289 aa8.87□□□□□ -0.99
CSMD1-213ENST00000523488 KRT36O76013 467 aa8.87□□□□□ -0.99
CSMD1-213ENST00000523488 COG7P83436 770 aa8.87□□□□□ -0.99
CSMD1-213ENST00000523488 TMEM62Q0P6H9 643 aa8.87□□□□□ -0.99
CSMD1-213ENST00000523488 EFHC2Q5JST6 749 aa8.87□□□□□ -0.99
CSMD1-213ENST00000523488 DYMQ7RTS9 669 aa8.87□□□□□ -0.99
CSMD1-213ENST00000523488 CCDC125Q86Z20 511 aa8.87□□□□□ -0.99
CSMD1-213ENST00000523488 CEP70Q8NHQ1 597 aa8.87□□□□□ -0.99
CSMD1-213ENST00000523488 PPP1R14CQ8TAE6 165 aa8.87□□□□□ -0.99
CSMD1-213ENST00000523488 SLC35G2Q8TBE7 412 aa8.87□□□□□ -0.99
CSMD1-213ENST00000523488 LARP4BQ92615 738 aaKnown RBP8.87□□□□□ -0.99
CSMD1-213ENST00000523488 MRPS26Q9BYN8 205 aaKnown RBP8.87□□□□□ -0.99
CSMD1-213ENST00000523488 CRNKL1Q9BZJ0 848 aaKnown RBP8.87□□□□□ -0.99
CSMD1-213ENST00000523488 INO80BQ9C086 356 aaPredicted RBP8.87□□□□□ -0.99
CSMD1-213ENST00000523488 SEPT11Q9NVA2 429 aaKnown RBP8.87□□□□□ -0.99
CSMD1-213ENST00000523488 ETNK2Q9NVF9 386 aa8.87□□□□□ -0.99
CSMD1-213ENST00000523488 ZFP69BQ9UJL9 534 aa8.87□□□□□ -0.99
CSMD1-213ENST00000523488 EFR3BQ9Y2G0 817 aa8.87□□□□□ -0.99
CSMD1-213ENST00000523488 FAM155AB1AL88 458 aaPredicted RBP8.86□□□□□ -0.99
CSMD1-213ENST00000523488 TM9SF1O15321 606 aa8.86□□□□□ -0.99
CSMD1-213ENST00000523488 GYG2O15488 501 aa8.86□□□□□ -0.99
CSMD1-213ENST00000523488 ALOX15P16050 662 aaPredicted RBP8.86□□□□□ -0.99
CSMD1-213ENST00000523488 GALCP54803 685 aa8.86□□□□□ -0.99
CSMD1-213ENST00000523488 MYBPC2Q14324 1141 aa8.86□□□□□ -0.99
CSMD1-213ENST00000523488 ELMSAN1Q6PJG2 1045 aa8.86□□□□□ -0.99
CSMD1-213ENST00000523488 SRRM1Q8IYB3 904 aaKnown RBP8.86□□□□□ -0.99
CSMD1-213ENST00000523488 CCDC105Q8IYK2 499 aa8.86□□□□□ -0.99
CSMD1-213ENST00000523488 ZCCHC9Q8N567 271 aaKnown RBP8.86□□□□□ -0.99
CSMD1-213ENST00000523488 C18orf8Q96DM3 657 aa8.86□□□□□ -0.99
CSMD1-213ENST00000523488 PANX3Q96QZ0 392 aa8.86□□□□□ -0.99
CSMD1-213ENST00000523488 NAP1L4Q99733 375 aaKnown RBP8.86□□□□□ -0.99
CSMD1-213ENST00000523488 STK33Q9BYT3 514 aa8.86□□□□□ -0.99
CSMD1-213ENST00000523488 CNNM1Q9NRU3 951 aa8.86□□□□□ -0.99
CSMD1-213ENST00000523488 NAALADL1Q9UQQ1 740 aa8.86□□□□□ -0.99
CSMD1-213ENST00000523488 CEPT1Q9Y6K0 416 aa8.86□□□□□ -0.99
CSMD1-213ENST00000523488 COL5A2P05997 1499 aaPredicted RBP8.86□□□□□ -0.99
CSMD1-213ENST00000523488 A0A0B4J269 797 aa8.86□□□□□ -0.99
CSMD1-213ENST00000523488 E7ESA3 106 aa8.86□□□□□ -0.99
CSMD1-213ENST00000523488 PDXKO00764 312 aa8.86□□□□□ -0.99
CSMD1-213ENST00000523488 SLC12A3P55017 1021 aa8.86□□□□□ -0.99
CSMD1-213ENST00000523488 CENPCQ03188 943 aa8.86□□□□□ -0.99
CSMD1-213ENST00000523488 TUBB3Q13509 450 aa8.86□□□□□ -0.99
CSMD1-213ENST00000523488 MAP7D1Q3KQU3 841 aa8.86□□□□□ -0.99
CSMD1-213ENST00000523488 RINLQ6ZS11 566 aa8.86□□□□□ -0.99
CSMD1-213ENST00000523488 SV2BQ7L1I2 683 aa8.86□□□□□ -0.99
CSMD1-213ENST00000523488 CNDP2Q96KP4 475 aaKnown RBP8.86□□□□□ -0.99
CSMD1-213ENST00000523488 QPCTLQ9NXS2 382 aa8.86□□□□□ -0.99
CSMD1-213ENST00000523488 B3GNT3Q9Y2A9 372 aa8.86□□□□□ -0.99
CSMD1-213ENST00000523488 TXNDC9O14530 226 aa8.85□□□□□ -0.99
CSMD1-213ENST00000523488 STIP1P31948 543 aaKnown RBP8.85□□□□□ -0.99
CSMD1-213ENST00000523488 ADARP55265 1226 aaKnown RBP8.85□□□□□ -0.99
CSMD1-213ENST00000523488 SLC18A2Q05940 514 aa8.85□□□□□ -0.99
CSMD1-213ENST00000523488 CYLC2Q14093 348 aaPredicted RBP8.85□□□□□ -0.99
CSMD1-213ENST00000523488 CTTNQ14247 550 aaKnown RBP8.85□□□□□ -0.99
CSMD1-213ENST00000523488 Q3C1V9 767 aa8.85□□□□□ -0.99
CSMD1-213ENST00000523488 FYB2Q5VWT5 728 aa8.85□□□□□ -0.99
CSMD1-213ENST00000523488 MOXD1Q6UVY6 613 aa8.85□□□□□ -0.99
CSMD1-213ENST00000523488 RFX8Q6ZV50 586 aa8.85□□□□□ -0.99
CSMD1-213ENST00000523488 SLC13A5Q86YT5 568 aaPredicted RBP8.85□□□□□ -0.99
CSMD1-213ENST00000523488 MYOCDQ8IZQ8 938 aa8.85□□□□□ -0.99
CSMD1-213ENST00000523488 ARHGAP24Q8N264 748 aa8.85□□□□□ -0.99
CSMD1-213ENST00000523488 U2AF1L4Q8WU68 220 aaKnown RBP8.85□□□□□ -0.99
CSMD1-213ENST00000523488 SLC35C1Q96A29 364 aa8.85□□□□□ -0.99
CSMD1-213ENST00000523488 RANBP9Q96S59 729 aa8.85□□□□□ -0.99
CSMD1-213ENST00000523488 SF3B1O75533 1304 aaKnown RBP eCLIP8.85□□□□□ -0.991e-7■■■■■ 172.3
CSMD1-213ENST00000523488 MYO3BQ8WXR4 1341 aa8.85□□□□□ -0.99
CSMD1-213ENST00000523488 SLC22A1O15245 554 aa8.85□□□□□ -0.99
CSMD1-213ENST00000523488 AOC1P19801 751 aa8.85□□□□□ -0.99
CSMD1-213ENST00000523488 ZNF211Q13398 564 aaPredicted RBP8.85□□□□□ -0.99
CSMD1-213ENST00000523488 MAP3K21Q5TCX8 1036 aa8.85□□□□□ -0.99
CSMD1-213ENST00000523488 GRAMD4Q6IC98 578 aa8.85□□□□□ -0.99
CSMD1-213ENST00000523488 DNAAF5Q86Y56 855 aa8.85□□□□□ -0.99
CSMD1-213ENST00000523488 ERI1Q8IV48 349 aaKnown RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms