RNA–Protein interactions for RNA: ENST00000523298.5

CTNNA1-238, Transcript of catenin alpha 1, human

TSL 2

Gene CTNNA1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-238	ENST00000523298	CHST2	Q9Y4C5	530 aa		5.7	□□□□□ -1.5
CTNNA1-238	ENST00000523298	XDH	P47989	1333 aa		5.7	□□□□□ -1.5
CTNNA1-238	ENST00000523298	IPO13	O94829	963 aa	Known RBP	5.69	□□□□□ -1.5
CTNNA1-238	ENST00000523298	ZFPL1	O95159	310 aa		5.69	□□□□□ -1.5
CTNNA1-238	ENST00000523298	ABHD16A	O95870	558 aa		5.69	□□□□□ -1.5
CTNNA1-238	ENST00000523298	RARB	P10826	455 aa		5.69	□□□□□ -1.5
CTNNA1-238	ENST00000523298	EN2	P19622	333 aa	Predicted RBP	5.69	□□□□□ -1.5
CTNNA1-238	ENST00000523298	GCSH	P23434	173 aa		5.69	□□□□□ -1.5
CTNNA1-238	ENST00000523298	CASP5	P51878	434 aa		5.69	□□□□□ -1.5
CTNNA1-238	ENST00000523298	ZNF135	P52742	658 aa	Predicted RBP	5.69	□□□□□ -1.5
CTNNA1-238	ENST00000523298	RNASE9	P60153	205 aa	Known RBP	5.69	□□□□□ -1.5
CTNNA1-238	ENST00000523298	NFIX	Q14938	502 aa		5.69	□□□□□ -1.5
CTNNA1-238	ENST00000523298	LONRF1	Q17RB8	773 aa		5.69	□□□□□ -1.5
CTNNA1-238	ENST00000523298	PDCD4	Q53EL6	469 aa	Known RBP	5.69	□□□□□ -1.5
CTNNA1-238	ENST00000523298	DCAF17	Q5H9S7	520 aa	Predicted RBP	5.69	□□□□□ -1.5
CTNNA1-238	ENST00000523298	METTL24	Q5JXM2	366 aa		5.69	□□□□□ -1.5
CTNNA1-238	ENST00000523298	LCE4A	Q5TA78	99 aa		5.69	□□□□□ -1.5
CTNNA1-238	ENST00000523298	AGAP9	Q5VTM2	703 aa		5.69	□□□□□ -1.5
CTNNA1-238	ENST00000523298	PDPR	Q8NCN5	879 aa		5.69	□□□□□ -1.5
CTNNA1-238	ENST00000523298	SLC17A8	Q8NDX2	589 aa		5.69	□□□□□ -1.5
CTNNA1-238	ENST00000523298	MTFMT	Q96DP5	389 aa	Known RBP	5.69	□□□□□ -1.5
CTNNA1-238	ENST00000523298	ADO	Q96SZ5	270 aa		5.69	□□□□□ -1.5
CTNNA1-238	ENST00000523298	MPHOSPH6	Q99547	160 aa	Known RBP	5.69	□□□□□ -1.5
CTNNA1-238	ENST00000523298	GPR87	Q9BY21	358 aa		5.69	□□□□□ -1.5
CTNNA1-238	ENST00000523298	BRD9	Q9H8M2	597 aa		5.69	□□□□□ -1.5
CTNNA1-238	ENST00000523298	AS3MT	Q9HBK9	375 aa		5.69	□□□□□ -1.5
CTNNA1-238	ENST00000523298	ZDHHC8	Q9ULC8	765 aa		5.69	□□□□□ -1.5
CTNNA1-238	ENST00000523298	TPCN1	Q9ULQ1	816 aa		5.69	□□□□□ -1.5
CTNNA1-238	ENST00000523298	MED16	Q9Y2X0	877 aa		5.69	□□□□□ -1.5
CTNNA1-238	ENST00000523298	UNC5C	O95185	931 aa		5.68	□□□□□ -1.5
CTNNA1-238	ENST00000523298	KIF20A	O95235	890 aa		5.68	□□□□□ -1.5
CTNNA1-238	ENST00000523298	NBPF7	P0C2Y1	421 aa	Predicted RBP	5.68	□□□□□ -1.5
CTNNA1-238	ENST00000523298	NR4A1	P22736	598 aa		5.68	□□□□□ -1.5
CTNNA1-238	ENST00000523298	HIBADH	P31937	336 aa	Known RBP	5.68	□□□□□ -1.5
CTNNA1-238	ENST00000523298	HTRA4	P83105	476 aa	Predicted RBP	5.68	□□□□□ -1.5
CTNNA1-238	ENST00000523298	CNGA2	Q16280	664 aa		5.68	□□□□□ -1.5
CTNNA1-238	ENST00000523298	FBLN7	Q53RD9	439 aa		5.68	□□□□□ -1.5
CTNNA1-238	ENST00000523298	XRRA1	Q6P2D8	792 aa		5.68	□□□□□ -1.5
CTNNA1-238	ENST00000523298	MICU3	Q86XE3	530 aa		5.68	□□□□□ -1.5
CTNNA1-238	ENST00000523298	FITM2	Q8N6M3	262 aa		5.68	□□□□□ -1.5
CTNNA1-238	ENST00000523298		Q8NA96	180 aa		5.68	□□□□□ -1.5
CTNNA1-238	ENST00000523298	PHKB	Q93100	1093 aa		5.68	□□□□□ -1.5
CTNNA1-238	ENST00000523298	LOXL4	Q96JB6	756 aa		5.68	□□□□□ -1.5
CTNNA1-238	ENST00000523298	C8orf49	Q96NF6	230 aa		5.68	□□□□□ -1.5
CTNNA1-238	ENST00000523298	IMPG2	Q9BZV3	1241 aa		5.68	□□□□□ -1.5
CTNNA1-238	ENST00000523298	TINAGL1	Q9GZM7	467 aa	Predicted RBP	5.68	□□□□□ -1.5
CTNNA1-238	ENST00000523298	ZNF700	Q9H0M5	742 aa		5.68	□□□□□ -1.5
CTNNA1-238	ENST00000523298	SARS2	Q9NP81	518 aa	Known RBP	5.68	□□□□□ -1.5
CTNNA1-238	ENST00000523298	KLHL11	Q9NVR0	708 aa		5.68	□□□□□ -1.5
CTNNA1-238	ENST00000523298	TBC1D30	Q9Y2I9	924 aa		5.68	□□□□□ -1.5
CTNNA1-238	ENST00000523298	KRTAP23-1	A1A580	65 aa		5.67	□□□□□ -1.5
CTNNA1-238	ENST00000523298	NCK2	O43639	380 aa		5.67	□□□□□ -1.5
CTNNA1-238	ENST00000523298	FDXR	P22570	491 aa		5.67	□□□□□ -1.5
CTNNA1-238	ENST00000523298	SLC25A3	Q00325	362 aa		5.67	□□□□□ -1.5
CTNNA1-238	ENST00000523298	ZNF543	Q08ER8	600 aa		5.67	□□□□□ -1.5
CTNNA1-238	ENST00000523298	CTBP1	Q13363	440 aa		5.67	□□□□□ -1.5
CTNNA1-238	ENST00000523298	PICALM	Q13492	652 aa		5.67	□□□□□ -1.5
CTNNA1-238	ENST00000523298	TSHZ3	Q63HK5	1081 aa		5.67	□□□□□ -1.5
CTNNA1-238	ENST00000523298	PPP1R32	Q7Z5V6	425 aa		5.67	□□□□□ -1.5
CTNNA1-238	ENST00000523298	USP37	Q86T82	979 aa		5.67	□□□□□ -1.5
CTNNA1-238	ENST00000523298	PDSS2	Q86YH6	399 aa		5.67	□□□□□ -1.5
CTNNA1-238	ENST00000523298	ANKRD35	Q8N283	1001 aa		5.67	□□□□□ -1.5
CTNNA1-238	ENST00000523298	RNF152	Q8N8N0	203 aa		5.67	□□□□□ -1.5
CTNNA1-238	ENST00000523298	OR56A1	Q8NGH5	318 aa		5.67	□□□□□ -1.5
CTNNA1-238	ENST00000523298	CXorf38	Q8TB03	319 aa		5.67	□□□□□ -1.5
CTNNA1-238	ENST00000523298	ZNF483	Q8TF39	744 aa	Predicted RBP	5.67	□□□□□ -1.5
CTNNA1-238	ENST00000523298	FBXO41	Q8TF61	875 aa		5.67	□□□□□ -1.5
CTNNA1-238	ENST00000523298	KBTBD7	Q8WVZ9	684 aa		5.67	□□□□□ -1.5
CTNNA1-238	ENST00000523298	EDA	Q92838	391 aa		5.67	□□□□□ -1.5
CTNNA1-238	ENST00000523298	GJB4	Q9NTQ9	266 aa		5.67	□□□□□ -1.5
CTNNA1-238	ENST00000523298	PIH1D1	Q9NWS0	290 aa	Known RBP	5.67	□□□□□ -1.5
CTNNA1-238	ENST00000523298	ETAA1	Q9NY74	926 aa		5.67	□□□□□ -1.5
CTNNA1-238	ENST00000523298	TAGLN3	Q9UI15	199 aa		5.67	□□□□□ -1.5
CTNNA1-238	ENST00000523298	USP15	Q9Y4E8	981 aa	Predicted RBP	5.67	□□□□□ -1.5
CTNNA1-238	ENST00000523298		M0QYG6	137 aa		5.66	□□□□□ -1.5
CTNNA1-238	ENST00000523298	BTN3A1	O00481	513 aa		5.66	□□□□□ -1.5
CTNNA1-238	ENST00000523298	PLIN1	O60240	522 aa		5.66	□□□□□ -1.5
CTNNA1-238	ENST00000523298	CKB	P12277	381 aa		5.66	□□□□□ -1.5
CTNNA1-238	ENST00000523298	ALAS1	P13196	640 aa		5.66	□□□□□ -1.5
CTNNA1-238	ENST00000523298	BRAF	P15056	766 aa		5.66	□□□□□ -1.5
CTNNA1-238	ENST00000523298	TSHR	P16473	764 aa		5.66	□□□□□ -1.5
CTNNA1-238	ENST00000523298	MAN2A2	P49641	1150 aa		5.66	□□□□□ -1.5
CTNNA1-238	ENST00000523298	RPS16	P62249	146 aa	Known RBP	5.66	□□□□□ -1.5
CTNNA1-238	ENST00000523298	MC2R	Q01718	297 aa		5.66	□□□□□ -1.5
CTNNA1-238	ENST00000523298	OCA2	Q04671	838 aa		5.66	□□□□□ -1.5
CTNNA1-238	ENST00000523298	TOB2	Q14106	344 aa	Predicted RBP	5.66	□□□□□ -1.5
CTNNA1-238	ENST00000523298	HABP2	Q14520	560 aa	Predicted RBP	5.66	□□□□□ -1.5
CTNNA1-238	ENST00000523298	KLHDC7A	Q5VTJ3	777 aa		5.66	□□□□□ -1.5
CTNNA1-238	ENST00000523298	MORC1	Q86VD1	984 aa		5.66	□□□□□ -1.5
CTNNA1-238	ENST00000523298	LIX1L	Q8IVB5	337 aa		5.66	□□□□□ -1.5
CTNNA1-238	ENST00000523298	RHOT2	Q8IXI1	618 aa		5.66	□□□□□ -1.5
CTNNA1-238	ENST00000523298	GSPT2	Q8IYD1	628 aa	Known RBP	5.66	□□□□□ -1.5
CTNNA1-238	ENST00000523298	CFAP52	Q8N1V2	620 aa		5.66	□□□□□ -1.5
CTNNA1-238	ENST00000523298	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	5.66	□□□□□ -1.5
CTNNA1-238	ENST00000523298	OR56A3	Q8NH54	315 aa		5.66	□□□□□ -1.5
CTNNA1-238	ENST00000523298	IL17D	Q8TAD2	202 aa		5.66	□□□□□ -1.5
CTNNA1-238	ENST00000523298	SCAMP4	Q969E2	229 aa		5.66	□□□□□ -1.5
CTNNA1-238	ENST00000523298	RPS6KC1	Q96S38	1066 aa		5.66	□□□□□ -1.5
CTNNA1-238	ENST00000523298	LRRC27	Q9C0I9	530 aa		5.66	□□□□□ -1.5
CTNNA1-238	ENST00000523298	BTBD1	Q9H0C5	482 aa		5.66	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms