RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 AFF4Q9UHB7 1163 aaKnown RBP16.8■□□□□ 0.28
MRPS28-209ENST00000522987 SLC27A5Q9Y2P5 690 aa16.8■□□□□ 0.28
MRPS28-209ENST00000522987 KIF3AQ9Y496 699 aa16.8■□□□□ 0.28
MRPS28-209ENST00000522987 YIPF1Q9Y548 306 aa16.8■□□□□ 0.28
MRPS28-209ENST00000522987 DENND4CQ5VZ89 1909 aa16.8■□□□□ 0.28
MRPS28-209ENST00000522987 FRYLO94915 3013 aa16.8■□□□□ 0.28
MRPS28-209ENST00000522987 DCHS1Q96JQ0 3298 aa16.79■□□□□ 0.28
MRPS28-209ENST00000522987 TTC26A0AVF1 554 aa16.79■□□□□ 0.28
MRPS28-209ENST00000522987 ZNF197O14709 1029 aa16.79■□□□□ 0.28
MRPS28-209ENST00000522987 VNN2O95498 520 aa16.79■□□□□ 0.28
MRPS28-209ENST00000522987 CLTAP09496 248 aa16.79■□□□□ 0.28
MRPS28-209ENST00000522987 NCKAP1LP55160 1127 aa16.79■□□□□ 0.28
MRPS28-209ENST00000522987 YWHAHQ04917 246 aaPredicted RBP16.79■□□□□ 0.28
MRPS28-209ENST00000522987 GRIN1Q05586 938 aa16.79■□□□□ 0.28
MRPS28-209ENST00000522987 PPP2R3AQ06190 1150 aa16.79■□□□□ 0.28
MRPS28-209ENST00000522987 MCM6Q14566 821 aa16.79■□□□□ 0.28
MRPS28-209ENST00000522987 RABEP1Q15276 862 aa16.79■□□□□ 0.28
MRPS28-209ENST00000522987 TPGS2Q68CL5 300 aa16.79■□□□□ 0.28
MRPS28-209ENST00000522987 VITQ6UXI7 678 aa16.79■□□□□ 0.28
MRPS28-209ENST00000522987 ZPBP2Q6X784 338 aa16.79■□□□□ 0.28
MRPS28-209ENST00000522987 ZNF852Q6ZMS4 543 aa16.79■□□□□ 0.28
MRPS28-209ENST00000522987 RTL10Q7L3V2 364 aa16.79■□□□□ 0.28
MRPS28-209ENST00000522987 MYCT1Q8N699 235 aa16.79■□□□□ 0.28
MRPS28-209ENST00000522987 ASB16Q96NS5 453 aa16.79■□□□□ 0.28
MRPS28-209ENST00000522987 TMEM209Q96SK2 561 aa16.79■□□□□ 0.28
MRPS28-209ENST00000522987 TRMT61BQ9BVS5 477 aaKnown RBP16.79■□□□□ 0.28
MRPS28-209ENST00000522987 AVENQ9NQS1 362 aaPredicted RBP16.79■□□□□ 0.28
MRPS28-209ENST00000522987 ASAH2Q9NR71 780 aa16.79■□□□□ 0.28
MRPS28-209ENST00000522987 GPR179Q6PRD1 2367 aa16.79■□□□□ 0.28
MRPS28-209ENST00000522987 TISP43B9A030 160 aa16.78■□□□□ 0.28
MRPS28-209ENST00000522987 HNRNPDLO14979 420 aaKnown RBP16.78■□□□□ 0.28
MRPS28-209ENST00000522987 FAM13AO94988 1023 aa16.78■□□□□ 0.28
MRPS28-209ENST00000522987 KRT18P05783 430 aaKnown RBP16.78■□□□□ 0.28
MRPS28-209ENST00000522987 DUSP4Q13115 394 aa16.78■□□□□ 0.28
MRPS28-209ENST00000522987 KARSQ15046 597 aaKnown RBP16.78■□□□□ 0.28
MRPS28-209ENST00000522987 ENOX2Q16206 610 aaKnown RBP16.78■□□□□ 0.28
MRPS28-209ENST00000522987 STXBP5Q5T5C0 1151 aa16.78■□□□□ 0.28
MRPS28-209ENST00000522987 USP37Q86T82 979 aa16.78■□□□□ 0.28
MRPS28-209ENST00000522987 SUMF1Q8NBK3 374 aa16.78■□□□□ 0.28
MRPS28-209ENST00000522987 RASSF8Q8NHQ8 419 aa16.78■□□□□ 0.28
MRPS28-209ENST00000522987 TTC8Q8TAM2 541 aa16.78■□□□□ 0.28
MRPS28-209ENST00000522987 SHKBP1Q8TBC3 707 aa16.78■□□□□ 0.28
MRPS28-209ENST00000522987 ZSCAN18Q8TBC5 510 aaPredicted RBP16.78■□□□□ 0.28
MRPS28-209ENST00000522987 RUBCNQ92622 972 aa16.78■□□□□ 0.28
MRPS28-209ENST00000522987 IKZF4Q9H2S9 585 aa16.78■□□□□ 0.28
MRPS28-209ENST00000522987 LARSQ9P2J5 1176 aaKnown RBP16.78■□□□□ 0.28
MRPS28-209ENST00000522987 NCDNQ9UBB6 729 aa16.78■□□□□ 0.28
MRPS28-209ENST00000522987 OBSL1O75147 1896 aa16.78■□□□□ 0.28
MRPS28-209ENST00000522987 A0A1W2PRU2 124 aa16.77■□□□□ 0.28
MRPS28-209ENST00000522987 PLCG1P19174 1290 aa16.77■□□□□ 0.28
MRPS28-209ENST00000522987 NMT1P30419 496 aaKnown RBP16.77■□□□□ 0.28
MRPS28-209ENST00000522987 MTAPQ13126 283 aa16.77■□□□□ 0.28
MRPS28-209ENST00000522987 FZD5Q13467 585 aa16.77■□□□□ 0.28
MRPS28-209ENST00000522987 JADE1Q6IE81 842 aa16.77■□□□□ 0.28
MRPS28-209ENST00000522987 SLC39A4Q6P5W5 647 aa16.77■□□□□ 0.28
MRPS28-209ENST00000522987 ATRIPQ8WXE1 791 aa16.77■□□□□ 0.28
MRPS28-209ENST00000522987 SMARCD2Q92925 531 aa16.77■□□□□ 0.28
MRPS28-209ENST00000522987 RSPRY1Q96DX4 576 aa16.77■□□□□ 0.28
MRPS28-209ENST00000522987 MSTO1Q9BUK6 570 aa16.77■□□□□ 0.28
MRPS28-209ENST00000522987 OSBPL6Q9BZF3 934 aa16.77■□□□□ 0.28
MRPS28-209ENST00000522987 DNAJC25Q9H1X3 360 aa16.77■□□□□ 0.28
MRPS28-209ENST00000522987 RPF1Q9H9Y2 349 aaKnown RBP16.77■□□□□ 0.28
MRPS28-209ENST00000522987 TBX20Q9UMR3 447 aa16.77■□□□□ 0.28
MRPS28-209ENST00000522987 UBQLN1Q9UMX0 589 aaKnown RBP16.77■□□□□ 0.28
MRPS28-209ENST00000522987 CEP250Q9BV73 2442 aa16.77■□□□□ 0.27
MRPS28-209ENST00000522987 HEPACAM2A8MVW5 462 aa16.76■□□□□ 0.27
MRPS28-209ENST00000522987 M0QZQ0 153 aa16.76■□□□□ 0.27
MRPS28-209ENST00000522987 OGTO15294 1046 aa16.76■□□□□ 0.27
MRPS28-209ENST00000522987 NFICP08651 508 aa16.76■□□□□ 0.27
MRPS28-209ENST00000522987 LRPAP1P30533 357 aa16.76■□□□□ 0.27
MRPS28-209ENST00000522987 UBA7P41226 1012 aa16.76■□□□□ 0.27
MRPS28-209ENST00000522987 SOX9P48436 509 aa16.76■□□□□ 0.27
MRPS28-209ENST00000522987 ZBTB6Q15916 424 aa16.76■□□□□ 0.27
MRPS28-209ENST00000522987 LPAL2Q16609 132 aa16.76■□□□□ 0.27
MRPS28-209ENST00000522987 ZC2HC1CQ53FD0 456 aaPredicted RBP16.76■□□□□ 0.27
MRPS28-209ENST00000522987 OVOS1Q6IE37 1185 aa16.76■□□□□ 0.27
MRPS28-209ENST00000522987 ATAD1Q8NBU5 361 aa16.76■□□□□ 0.27
MRPS28-209ENST00000522987 CLDN23Q96B33 292 aa16.76■□□□□ 0.27
MRPS28-209ENST00000522987 CALML4Q96GE6 196 aa16.76■□□□□ 0.27
MRPS28-209ENST00000522987 PLEKHA5Q9HAU0 1116 aa16.76■□□□□ 0.27
MRPS28-209ENST00000522987 ZNF334Q9HCZ1 680 aaPredicted RBP16.76■□□□□ 0.27
MRPS28-209ENST00000522987 BLOC1S4Q9NUP1 217 aa16.76■□□□□ 0.27
MRPS28-209ENST00000522987 FBXO4Q9UKT5 387 aa16.76■□□□□ 0.27
MRPS28-209ENST00000522987 SMC3Q9UQE7 1217 aa16.76■□□□□ 0.27
MRPS28-209ENST00000522987 PIAS3Q9Y6X2 628 aa16.76■□□□□ 0.27
MRPS28-209ENST00000522987 MED19A0JLT2 244 aaPredicted RBP16.75■□□□□ 0.27
MRPS28-209ENST00000522987 ANKRD63C9JTQ0 380 aa16.75■□□□□ 0.27
MRPS28-209ENST00000522987 ZNF263O14978 683 aa16.75■□□□□ 0.27
MRPS28-209ENST00000522987 SPTLC1O15269 473 aa16.75■□□□□ 0.27
MRPS28-209ENST00000522987 NCAM2O15394 837 aa16.75■□□□□ 0.27
MRPS28-209ENST00000522987 FAM189A1O60320 539 aa16.75■□□□□ 0.27
MRPS28-209ENST00000522987 PSMC3P17980 439 aa16.75■□□□□ 0.27
MRPS28-209ENST00000522987 CCNE1P24864 410 aa16.75■□□□□ 0.27
MRPS28-209ENST00000522987 ACOT2P49753 483 aa16.75■□□□□ 0.27
MRPS28-209ENST00000522987 ARL6IP4Q66PJ3 421 aaKnown RBP16.75■□□□□ 0.27
MRPS28-209ENST00000522987 TMC8Q8IU68 726 aa16.75■□□□□ 0.27
MRPS28-209ENST00000522987 FAM3CQ92520 227 aa16.75■□□□□ 0.27
MRPS28-209ENST00000522987 DNASE1L2Q92874 299 aa16.75■□□□□ 0.27
MRPS28-209ENST00000522987 SENP8Q96LD8 212 aa16.75■□□□□ 0.27
MRPS28-209ENST00000522987 NELL2Q99435 816 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms