RNA–Protein interactions for RNA: ENST00000522414.1

PVT1-213, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 654 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-213ENST00000522414 RIPOR3Q96MK2 946 aa8.89□□□□□ -0.99
PVT1-213ENST00000522414 CSRNP2Q9H175 543 aa8.89□□□□□ -0.99
PVT1-213ENST00000522414 BRMS1Q9HCU9 246 aa8.89□□□□□ -0.99
PVT1-213ENST00000522414 ANKEF1Q9NU02 776 aa8.89□□□□□ -0.99
PVT1-213ENST00000522414 KANSL3Q9P2N6 904 aa8.89□□□□□ -0.99
PVT1-213ENST00000522414 CACNG4Q9UBN1 327 aa8.89□□□□□ -0.99
PVT1-213ENST00000522414 DBR1Q9UK59 544 aaKnown RBP8.89□□□□□ -0.99
PVT1-213ENST00000522414 NR2E1Q9Y466 385 aa8.89□□□□□ -0.99
PVT1-213ENST00000522414 PPME1Q9Y570 386 aa8.89□□□□□ -0.99
PVT1-213ENST00000522414 CFAP54Q96N23 3096 aa8.89□□□□□ -0.99
PVT1-213ENST00000522414 PTPRZ1P23471 2315 aaPredicted RBP8.88□□□□□ -0.99
PVT1-213ENST00000522414 NEMFO60524 1076 aa8.88□□□□□ -0.99
PVT1-213ENST00000522414 MED24O75448 989 aa8.88□□□□□ -0.99
PVT1-213ENST00000522414 LYPLA2O95372 231 aa8.88□□□□□ -0.99
PVT1-213ENST00000522414 XRCC6P12956 609 aaKnown RBP eCLIP8.88□□□□□ -0.99
PVT1-213ENST00000522414 MTHFRP42898 656 aa8.88□□□□□ -0.99
PVT1-213ENST00000522414 SCNN1GP51170 649 aa8.88□□□□□ -0.99
PVT1-213ENST00000522414 CLCN4P51793 760 aa8.88□□□□□ -0.99
PVT1-213ENST00000522414 NCBP1Q09161 790 aaKnown RBP8.88□□□□□ -0.99
PVT1-213ENST00000522414 TCF15Q12870 199 aa8.88□□□□□ -0.99
PVT1-213ENST00000522414 TRIM29Q14134 588 aa8.88□□□□□ -0.99
PVT1-213ENST00000522414 GIT2Q14161 759 aa8.88□□□□□ -0.99
PVT1-213ENST00000522414 KIAA0319Q5VV43 1072 aa8.88□□□□□ -0.99
PVT1-213ENST00000522414 NOTUMQ6P988 496 aa8.88□□□□□ -0.99
PVT1-213ENST00000522414 GPR149Q86SP6 731 aa8.88□□□□□ -0.99
PVT1-213ENST00000522414 PALB2Q86YC2 1186 aa8.88□□□□□ -0.99
PVT1-213ENST00000522414 ALDH16A1Q8IZ83 802 aa8.88□□□□□ -0.99
PVT1-213ENST00000522414 GSTCDQ8NEC7 633 aa8.88□□□□□ -0.99
PVT1-213ENST00000522414 NECTIN4Q96NY8 510 aa8.88□□□□□ -0.99
PVT1-213ENST00000522414 LPIN3Q9BQK8 851 aa8.88□□□□□ -0.99
PVT1-213ENST00000522414 TMEM175Q9BSA9 504 aa8.88□□□□□ -0.99
PVT1-213ENST00000522414 POLR3FQ9H1D9 316 aaPredicted RBP8.88□□□□□ -0.99
PVT1-213ENST00000522414 KCNH6Q9H252 994 aa8.88□□□□□ -0.99
PVT1-213ENST00000522414 CXCL16Q9H2A7 254 aa8.88□□□□□ -0.99
PVT1-213ENST00000522414 NXF3Q9H4D5 531 aaKnown RBP8.88□□□□□ -0.99
PVT1-213ENST00000522414 MRPL17Q9NRX2 175 aaKnown RBP8.88□□□□□ -0.99
PVT1-213ENST00000522414 MARCH5Q9NX47 278 aa8.88□□□□□ -0.99
PVT1-213ENST00000522414 CNTNAP2Q9UHC6 1331 aa8.87□□□□□ -0.99
PVT1-213ENST00000522414 RIF1Q5UIP0 2472 aaKnown RBP8.87□□□□□ -0.99
PVT1-213ENST00000522414 A0A1B0GUA9 196 aa8.87□□□□□ -0.99
PVT1-213ENST00000522414 TEX28O15482 410 aa8.87□□□□□ -0.99
PVT1-213ENST00000522414 GAS2O43903 313 aaKnown RBP8.87□□□□□ -0.99
PVT1-213ENST00000522414 USO1O60763 962 aaKnown RBP8.87□□□□□ -0.99
PVT1-213ENST00000522414 RFPL2O75678 378 aa8.87□□□□□ -0.99
PVT1-213ENST00000522414 NPTXRO95502 500 aa8.87□□□□□ -0.99
PVT1-213ENST00000522414 EFEMP2O95967 443 aa8.87□□□□□ -0.99
PVT1-213ENST00000522414 SOD2P04179 222 aa8.87□□□□□ -0.99
PVT1-213ENST00000522414 NFKB1P19838 968 aa8.87□□□□□ -0.99
PVT1-213ENST00000522414 IGFBP6P24592 240 aaPredicted RBP8.87□□□□□ -0.99
PVT1-213ENST00000522414 GRNP28799 593 aaKnown RBP8.87□□□□□ -0.99
PVT1-213ENST00000522414 AXLP30530 894 aa8.87□□□□□ -0.99
PVT1-213ENST00000522414 POU5F1BQ06416 359 aa8.87□□□□□ -0.99
PVT1-213ENST00000522414 DSC1Q08554 894 aa8.87□□□□□ -0.99
PVT1-213ENST00000522414 TFDP1Q14186 410 aa8.87□□□□□ -0.99
PVT1-213ENST00000522414 KIAA1841Q6NSI8 718 aa8.87□□□□□ -0.99
PVT1-213ENST00000522414 PPFIBP1Q86W92 1011 aa8.87□□□□□ -0.99
PVT1-213ENST00000522414 CCDC83Q8IWF9 413 aa8.87□□□□□ -0.99
PVT1-213ENST00000522414 DTWD1Q8N5C7 304 aa8.87□□□□□ -0.99
PVT1-213ENST00000522414 CNNM3Q8NE01 707 aa8.87□□□□□ -0.99
PVT1-213ENST00000522414 ST13P5Q8NFI4 369 aaPredicted RBP8.87□□□□□ -0.99
PVT1-213ENST00000522414 RPS6KC1Q96S38 1066 aa8.87□□□□□ -0.99
PVT1-213ENST00000522414 PAAF1Q9BRP4 392 aa8.87□□□□□ -0.99
PVT1-213ENST00000522414 COLEC11Q9BWP8 271 aa8.87□□□□□ -0.99
PVT1-213ENST00000522414 EMILIN2Q9BXX0 1053 aa8.87□□□□□ -0.99
PVT1-213ENST00000522414 GPR62Q9BZJ7 368 aa8.87□□□□□ -0.99
PVT1-213ENST00000522414 TRIM6Q9C030 488 aaPredicted RBP8.87□□□□□ -0.99
PVT1-213ENST00000522414 UBN1Q9NPG3 1134 aa8.87□□□□□ -0.99
PVT1-213ENST00000522414 PCMTD2Q9NV79 361 aa8.87□□□□□ -0.99
PVT1-213ENST00000522414 FAM86C1Q9NVL1 165 aa8.87□□□□□ -0.99
PVT1-213ENST00000522414 DZANK1Q9NVP4 752 aa8.87□□□□□ -0.99
PVT1-213ENST00000522414 PARP2Q9UGN5 583 aa8.87□□□□□ -0.99
PVT1-213ENST00000522414 SORCS3Q9UPU3 1222 aa8.87□□□□□ -0.99
PVT1-213ENST00000522414 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.87□□□□□ -0.99
PVT1-213ENST00000522414 CCDC195A0A1B0GUA6 201 aa8.86□□□□□ -0.99
PVT1-213ENST00000522414 LRRIQ4A6NIV6 560 aa8.86□□□□□ -0.99
PVT1-213ENST00000522414 H0Y858 1186 aa8.86□□□□□ -0.99
PVT1-213ENST00000522414 DEAF1O75398 565 aaPredicted RBP8.86□□□□□ -0.99
PVT1-213ENST00000522414 RPL17P18621 184 aaKnown RBP8.86□□□□□ -0.99
PVT1-213ENST00000522414 LIG1P18858 919 aa8.86□□□□□ -0.99
PVT1-213ENST00000522414 ECM1Q16610 540 aa8.86□□□□□ -0.99
PVT1-213ENST00000522414 FAM35AQ86V20 835 aa8.86□□□□□ -0.99
PVT1-213ENST00000522414 GLYCTKQ8IVS8 523 aa8.86□□□□□ -0.99
PVT1-213ENST00000522414 UBALD2Q8IYN6 164 aa8.86□□□□□ -0.99
PVT1-213ENST00000522414 ZDHHC14Q8IZN3 488 aa8.86□□□□□ -0.99
PVT1-213ENST00000522414 TDRD5Q8NAT2 981 aaKnown RBP8.86□□□□□ -0.99
PVT1-213ENST00000522414 RSAD2Q8WXG1 361 aa8.86□□□□□ -0.99
PVT1-213ENST00000522414 BSNDQ8WZ55 320 aa8.86□□□□□ -0.99
PVT1-213ENST00000522414 CCDC43Q96MW1 224 aaKnown RBP8.86□□□□□ -0.99
PVT1-213ENST00000522414 FZD8Q9H461 694 aa8.86□□□□□ -0.99
PVT1-213ENST00000522414 MAN1C1Q9NR34 630 aa8.86□□□□□ -0.99
PVT1-213ENST00000522414 CHST7Q9NS84 486 aa8.86□□□□□ -0.99
PVT1-213ENST00000522414 LIMCH1Q9UPQ0 1083 aa8.86□□□□□ -0.99
PVT1-213ENST00000522414 GIT1Q9Y2X7 761 aa8.86□□□□□ -0.99
PVT1-213ENST00000522414 DENND4AQ7Z401 1863 aa8.85□□□□□ -0.99
PVT1-213ENST00000522414 CARNS1A5YM72 827 aa8.85□□□□□ -0.99
PVT1-213ENST00000522414 INPPL1O15357 1258 aa8.85□□□□□ -0.99
PVT1-213ENST00000522414 N4BP1O75113 896 aaKnown RBP8.85□□□□□ -0.99
PVT1-213ENST00000522414 TADA2AO75478 443 aa8.85□□□□□ -0.99
PVT1-213ENST00000522414 EDN1P05305 212 aa8.85□□□□□ -0.99
PVT1-213ENST00000522414 URODP06132 367 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms