RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 HOXA2O43364 376 aa22.92■■□□□ 1.26
R3HCC1-208ENST00000522012 UPP2O95045 317 aa22.92■■□□□ 1.26
R3HCC1-208ENST00000522012 FERP16591 822 aa22.92■■□□□ 1.26
R3HCC1-208ENST00000522012 FECHP22830 423 aa22.92■■□□□ 1.26
R3HCC1-208ENST00000522012 PNPLA4P41247 253 aa22.92■■□□□ 1.26
R3HCC1-208ENST00000522012 ASPAP45381 313 aa22.92■■□□□ 1.26
R3HCC1-208ENST00000522012 TNNC1P63316 161 aa22.92■■□□□ 1.26
R3HCC1-208ENST00000522012 FMNL3Q8IVF7 1028 aa22.92■■□□□ 1.26
R3HCC1-208ENST00000522012 JAKMIP2Q96AA8 810 aa22.92■■□□□ 1.26
R3HCC1-208ENST00000522012 ZNF560Q96MR9 790 aa22.92■■□□□ 1.26
R3HCC1-208ENST00000522012 SOWAHDA6NJG2 315 aa22.91■■□□□ 1.26
R3HCC1-208ENST00000522012 PODXLO00592 558 aa22.91■■□□□ 1.26
R3HCC1-208ENST00000522012 SERPING1P05155 500 aa22.91■■□□□ 1.26
R3HCC1-208ENST00000522012 WEE2P0C1S8 567 aa22.91■■□□□ 1.26
R3HCC1-208ENST00000522012 CCDC172P0C7W6 258 aa22.91■■□□□ 1.26
R3HCC1-208ENST00000522012 RPL9P32969 192 aaKnown RBP22.91■■□□□ 1.26
R3HCC1-208ENST00000522012 GATMP50440 423 aa22.91■■□□□ 1.26
R3HCC1-208ENST00000522012 CLCNKBP51801 687 aa22.91■■□□□ 1.26
R3HCC1-208ENST00000522012 RNASELQ05823 741 aaKnown RBP22.91■■□□□ 1.26
R3HCC1-208ENST00000522012 KLHL30Q0D2K2 578 aa22.91■■□□□ 1.26
R3HCC1-208ENST00000522012 PPIGQ13427 754 aaKnown RBP eCLIP22.91■■□□□ 1.26
R3HCC1-208ENST00000522012 TUSC3Q13454 348 aa22.91■■□□□ 1.26
R3HCC1-208ENST00000522012 TDRD12Q587J7 1177 aaKnown RBP22.91■■□□□ 1.26
R3HCC1-208ENST00000522012 IRF2BP2Q7Z5L9 587 aa22.91■■□□□ 1.26
R3HCC1-208ENST00000522012 FAM71AQ8IYT1 594 aa22.91■■□□□ 1.26
R3HCC1-208ENST00000522012 CRIPAKQ8N1N5 446 aa22.91■■□□□ 1.26
R3HCC1-208ENST00000522012 MMS19Q96T76 1030 aa22.91■■□□□ 1.26
R3HCC1-208ENST00000522012 PCDHB4Q9Y5E5 795 aa22.91■■□□□ 1.26
R3HCC1-208ENST00000522012 RALGAPA2Q2PPJ7 1873 aa22.9■■□□□ 1.26
R3HCC1-208ENST00000522012 SYN1P17600 705 aa22.9■■□□□ 1.26
R3HCC1-208ENST00000522012 CD58P19256 250 aa22.9■■□□□ 1.26
R3HCC1-208ENST00000522012 TAF6P49848 677 aa22.9■■□□□ 1.26
R3HCC1-208ENST00000522012 CDK17Q00537 523 aa22.9■■□□□ 1.26
R3HCC1-208ENST00000522012 FPGSQ05932 587 aa22.9■■□□□ 1.26
R3HCC1-208ENST00000522012 RABGGTAQ92696 567 aa22.9■■□□□ 1.26
R3HCC1-208ENST00000522012 FAXDC2Q96IV6 333 aa22.9■■□□□ 1.26
R3HCC1-208ENST00000522012 CASD1Q96PB1 797 aa22.9■■□□□ 1.26
R3HCC1-208ENST00000522012 TBC1D13Q9NVG8 400 aa22.9■■□□□ 1.26
R3HCC1-208ENST00000522012 ARHGAP20Q9P2F6 1191 aa22.9■■□□□ 1.26
R3HCC1-208ENST00000522012 SNX9Q9Y5X1 595 aa22.9■■□□□ 1.26
R3HCC1-208ENST00000522012 SCN5AQ14524 2016 aa22.9■■□□□ 1.26
R3HCC1-208ENST00000522012 KPNA7A9QM74 516 aa22.89■■□□□ 1.26
R3HCC1-208ENST00000522012 CYP26A1O43174 497 aa22.89■■□□□ 1.26
R3HCC1-208ENST00000522012 ARHGAP6O43182 974 aa22.89■■□□□ 1.26
R3HCC1-208ENST00000522012 EFCAB14O75071 495 aa22.89■■□□□ 1.26
R3HCC1-208ENST00000522012 AMHP03971 560 aa22.89■■□□□ 1.26
R3HCC1-208ENST00000522012 PLEKP08567 350 aaPredicted RBP22.89■■□□□ 1.26
R3HCC1-208ENST00000522012 ACO1P21399 889 aaKnown RBP22.89■■□□□ 1.26
R3HCC1-208ENST00000522012 RAP1GAPP47736 663 aa22.89■■□□□ 1.26
R3HCC1-208ENST00000522012 SV2CQ496J9 727 aa22.89■■□□□ 1.26
R3HCC1-208ENST00000522012 HGSNATQ68CP4 663 aa22.89■■□□□ 1.26
R3HCC1-208ENST00000522012 ZNF280BQ86YH2 543 aa22.89■■□□□ 1.26
R3HCC1-208ENST00000522012 DPF3Q92784 378 aa22.89■■□□□ 1.26
R3HCC1-208ENST00000522012 DDX27Q96GQ7 796 aaKnown RBP22.89■■□□□ 1.26
R3HCC1-208ENST00000522012 FAM193BQ96PV7 902 aaPredicted RBP22.89■■□□□ 1.26
R3HCC1-208ENST00000522012 BCO2Q9BYV7 579 aa22.89■■□□□ 1.26
R3HCC1-208ENST00000522012 SMYD3Q9H7B4 428 aa22.89■■□□□ 1.26
R3HCC1-208ENST00000522012 NHEJ1Q9H9Q4 299 aaPredicted RBP22.89■■□□□ 1.26
R3HCC1-208ENST00000522012 PYCARDQ9ULZ3 195 aa22.89■■□□□ 1.26
R3HCC1-208ENST00000522012 CITO14578 2027 aa22.88■■□□□ 1.25
R3HCC1-208ENST00000522012 SPTLC1O15269 473 aa22.88■■□□□ 1.25
R3HCC1-208ENST00000522012 EIF4A3P38919 411 aaKnown RBP22.88■■□□□ 1.25
R3HCC1-208ENST00000522012 CDH8P55286 799 aa22.88■■□□□ 1.25
R3HCC1-208ENST00000522012 LILRA4P59901 499 aa22.88■■□□□ 1.25
R3HCC1-208ENST00000522012 YWHAEP62258 255 aaKnown RBP22.88■■□□□ 1.25
R3HCC1-208ENST00000522012 MTF1Q14872 753 aa22.88■■□□□ 1.25
R3HCC1-208ENST00000522012 UPP1Q16831 310 aa22.88■■□□□ 1.25
R3HCC1-208ENST00000522012 TMEM270Q6UE05 265 aa22.88■■□□□ 1.25
R3HCC1-208ENST00000522012 OTOP2Q7RTS6 562 aa22.88■■□□□ 1.25
R3HCC1-208ENST00000522012 UROC1Q96N76 676 aa22.88■■□□□ 1.25
R3HCC1-208ENST00000522012 PAAF1Q9BRP4 392 aa22.88■■□□□ 1.25
R3HCC1-208ENST00000522012 SDCBP2Q9H190 292 aa22.88■■□□□ 1.25
R3HCC1-208ENST00000522012 HAUS4Q9H6D7 363 aa22.88■■□□□ 1.25
R3HCC1-208ENST00000522012 CYP3A43Q9HB55 503 aa22.88■■□□□ 1.25
R3HCC1-208ENST00000522012 CISHQ9NSE2 258 aa22.88■■□□□ 1.25
R3HCC1-208ENST00000522012 ZMYND8Q9ULU4 1186 aaPredicted RBP22.88■■□□□ 1.25
R3HCC1-208ENST00000522012 BZW2Q9Y6E2 419 aaKnown RBP22.88■■□□□ 1.25
R3HCC1-208ENST00000522012 TBKBP1A7MCY6 615 aa22.87■■□□□ 1.25
R3HCC1-208ENST00000522012 DDHD2O94830 711 aa22.87■■□□□ 1.25
R3HCC1-208ENST00000522012 FGBP02675 491 aa22.87■■□□□ 1.25
R3HCC1-208ENST00000522012 RAD9BQ6WBX8 426 aa22.87■■□□□ 1.25
R3HCC1-208ENST00000522012 C16orf59Q7L2K0 433 aa22.87■■□□□ 1.25
R3HCC1-208ENST00000522012 CCDC42Q96M95 316 aa22.87■■□□□ 1.25
R3HCC1-208ENST00000522012 DEF6Q9H4E7 631 aa22.87■■□□□ 1.25
R3HCC1-208ENST00000522012 BAIAP3O94812 1187 aa22.87■■□□□ 1.25
R3HCC1-208ENST00000522012 IGFBP6P24592 240 aaPredicted RBP22.87■■□□□ 1.25
R3HCC1-208ENST00000522012 CLCN1P35523 988 aa22.87■■□□□ 1.25
R3HCC1-208ENST00000522012 PRKCIP41743 596 aa22.87■■□□□ 1.25
R3HCC1-208ENST00000522012 WDR5P61964 334 aaKnown RBP22.87■■□□□ 1.25
R3HCC1-208ENST00000522012 ZNF365Q70YC5 407 aa22.87■■□□□ 1.25
R3HCC1-208ENST00000522012 UBR7Q8N806 425 aa22.87■■□□□ 1.25
R3HCC1-208ENST00000522012 RBBP8NLQ8NC74 664 aaPredicted RBP22.87■■□□□ 1.25
R3HCC1-208ENST00000522012 GDAP2Q9NXN4 497 aa22.87■■□□□ 1.25
R3HCC1-208ENST00000522012 ZKSCAN5Q9Y2L8 839 aa22.87■■□□□ 1.25
R3HCC1-208ENST00000522012 B3GAT3O94766 335 aa22.86■■□□□ 1.25
R3HCC1-208ENST00000522012 KCNJ6P48051 423 aa22.86■■□□□ 1.25
R3HCC1-208ENST00000522012 DEFB103AP81534 67 aa22.86■■□□□ 1.25
R3HCC1-208ENST00000522012 PTK2Q05397 1052 aa22.86■■□□□ 1.25
R3HCC1-208ENST00000522012 DSC1Q08554 894 aa22.86■■□□□ 1.25
R3HCC1-208ENST00000522012 PAN2Q504Q3 1202 aaKnown RBP22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms