RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 PRMT7Q9NVM4 692 aaPredicted RBP12.2□□□□□ -0.46
CSMD1-210ENST00000521646 DLL3Q9NYJ7 618 aa12.2□□□□□ -0.46
CSMD1-210ENST00000521646 POLIQ9UNA4 740 aa12.2□□□□□ -0.46
CSMD1-210ENST00000521646 CDY1Q9Y6F8 540 aa12.2□□□□□ -0.46
CSMD1-210ENST00000521646 LAMA1P25391 3075 aa12.19□□□□□ -0.46
CSMD1-210ENST00000521646 TPRP12270 2363 aaKnown RBP12.19□□□□□ -0.46
CSMD1-210ENST00000521646 KANSL1LA0AUZ9 987 aa12.19□□□□□ -0.46
CSMD1-210ENST00000521646 WDR27A2RRH5 827 aa12.19□□□□□ -0.46
CSMD1-210ENST00000521646 ACKR2O00590 384 aa12.19□□□□□ -0.46
CSMD1-210ENST00000521646 BAG4O95429 457 aaKnown RBP12.19□□□□□ -0.46
CSMD1-210ENST00000521646 HNRNPA1P09651 372 aaKnown RBP eCLIP12.19□□□□□ -0.46
CSMD1-210ENST00000521646 CYP11B2P19099 503 aa12.19□□□□□ -0.46
CSMD1-210ENST00000521646 HOXA9P31269 272 aa12.19□□□□□ -0.46
CSMD1-210ENST00000521646 MAPK7Q13164 816 aa12.19□□□□□ -0.46
CSMD1-210ENST00000521646 PRPF4BQ13523 1007 aaKnown RBP12.19□□□□□ -0.46
CSMD1-210ENST00000521646 ZNF174Q15697 407 aa12.19□□□□□ -0.46
CSMD1-210ENST00000521646 IL17AQ16552 155 aa12.19□□□□□ -0.46
CSMD1-210ENST00000521646 PRSS36Q5K4E3 855 aa12.19□□□□□ -0.46
CSMD1-210ENST00000521646 ALKAL1Q6UXT8 129 aa12.19□□□□□ -0.46
CSMD1-210ENST00000521646 KCNK18Q7Z418 384 aa12.19□□□□□ -0.46
CSMD1-210ENST00000521646 MEIOBQ8N635 442 aa12.19□□□□□ -0.46
CSMD1-210ENST00000521646 MCRS1Q96EZ8 462 aa12.19□□□□□ -0.46
CSMD1-210ENST00000521646 PRIMPOLQ96LW4 560 aa12.19□□□□□ -0.46
CSMD1-210ENST00000521646 ZSWIM3Q96MP5 696 aa12.19□□□□□ -0.46
CSMD1-210ENST00000521646 PTPRHQ9HD43 1115 aa12.19□□□□□ -0.46
CSMD1-210ENST00000521646 NXF1Q9UBU9 619 aaKnown RBP12.19□□□□□ -0.46
CSMD1-210ENST00000521646 PDCD11Q14690 1871 aaKnown RBP12.19□□□□□ -0.46
CSMD1-210ENST00000521646 FRYQ5TBA9 3013 aa12.18□□□□□ -0.46
CSMD1-210ENST00000521646 CHD8Q9HCK8 2581 aa12.18□□□□□ -0.46
CSMD1-210ENST00000521646 TICRRQ7Z2Z1 1910 aa12.18□□□□□ -0.46
CSMD1-210ENST00000521646 SMIM28A0A1B0GU29 152 aa12.18□□□□□ -0.46
CSMD1-210ENST00000521646 FAM170BA6NMN3 283 aa12.18□□□□□ -0.46
CSMD1-210ENST00000521646 PP2D1A8MPX8 630 aa12.18□□□□□ -0.46
CSMD1-210ENST00000521646 TMEM189-UBE2V1I3L0A0 370 aa12.18□□□□□ -0.46
CSMD1-210ENST00000521646 B3GAT3O94766 335 aa12.18□□□□□ -0.46
CSMD1-210ENST00000521646 RHOP08100 348 aa12.18□□□□□ -0.46
CSMD1-210ENST00000521646 XRCC6P12956 609 aaKnown RBP eCLIP12.18□□□□□ -0.46
CSMD1-210ENST00000521646 ROR1Q01973 937 aa12.18□□□□□ -0.46
CSMD1-210ENST00000521646 GRM2Q14416 872 aa12.18□□□□□ -0.46
CSMD1-210ENST00000521646 UBXN2BQ14CS0 331 aa12.18□□□□□ -0.46
CSMD1-210ENST00000521646 PABPC1LQ4VXU2 614 aaKnown RBP12.18□□□□□ -0.46
CSMD1-210ENST00000521646 XKR4Q5GH76 650 aa12.18□□□□□ -0.46
CSMD1-210ENST00000521646 INTS6LQ5JSJ4 861 aaKnown RBP12.18□□□□□ -0.46
CSMD1-210ENST00000521646 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.18□□□□□ -0.46
CSMD1-210ENST00000521646 LINC00528Q8N1L1 170 aa12.18□□□□□ -0.46
CSMD1-210ENST00000521646 C18orf25Q96B23 403 aaPredicted RBP12.18□□□□□ -0.46
CSMD1-210ENST00000521646 RSPRY1Q96DX4 576 aa12.18□□□□□ -0.46
CSMD1-210ENST00000521646 NAP1L4Q99733 375 aaKnown RBP12.18□□□□□ -0.46
CSMD1-210ENST00000521646 POLR3CQ9BUI4 534 aaPredicted RBP12.18□□□□□ -0.46
CSMD1-210ENST00000521646 HAPLN2Q9GZV7 340 aa12.18□□□□□ -0.46
CSMD1-210ENST00000521646 CDT1Q9H211 546 aa12.18□□□□□ -0.46
CSMD1-210ENST00000521646 TUFT1Q9NNX1 390 aa12.18□□□□□ -0.46
CSMD1-210ENST00000521646 PARD6AQ9NPB6 346 aa12.18□□□□□ -0.46
CSMD1-210ENST00000521646 HEBP1Q9NRV9 189 aa12.18□□□□□ -0.46
CSMD1-210ENST00000521646 C2orf42Q9NWW7 574 aa12.18□□□□□ -0.46
CSMD1-210ENST00000521646 DPP7Q9UHL4 492 aa12.18□□□□□ -0.46
CSMD1-210ENST00000521646 ACACBO00763 2458 aa12.17□□□□□ -0.46
CSMD1-210ENST00000521646 SOBPA7XYQ1 873 aa12.17□□□□□ -0.46
CSMD1-210ENST00000521646 N4BP3O15049 544 aa12.17□□□□□ -0.46
CSMD1-210ENST00000521646 MAN1A2O60476 641 aa12.17□□□□□ -0.46
CSMD1-210ENST00000521646 LILRB5O75023 590 aa12.17□□□□□ -0.46
CSMD1-210ENST00000521646 ABLIM3O94929 683 aa12.17□□□□□ -0.46
CSMD1-210ENST00000521646 POU2F2P09086 479 aa12.17□□□□□ -0.46
CSMD1-210ENST00000521646 GJA1P17302 382 aa12.17□□□□□ -0.46
CSMD1-210ENST00000521646 XBP1P17861 261 aa12.17□□□□□ -0.46
CSMD1-210ENST00000521646 RPA1P27694 616 aa12.17□□□□□ -0.46
CSMD1-210ENST00000521646 NAMPTP43490 491 aa12.17□□□□□ -0.46
CSMD1-210ENST00000521646 TOB1P50616 345 aaPredicted RBP12.17□□□□□ -0.46
CSMD1-210ENST00000521646 OSTNP61366 133 aa12.17□□□□□ -0.46
CSMD1-210ENST00000521646 CBLBQ13191 982 aa12.17□□□□□ -0.46
CSMD1-210ENST00000521646 GAS6Q14393 721 aa12.17□□□□□ -0.46
CSMD1-210ENST00000521646 SEZ6Q53EL9 994 aa12.17□□□□□ -0.46
CSMD1-210ENST00000521646 LIN9Q5TKA1 542 aa12.17□□□□□ -0.46
CSMD1-210ENST00000521646 TPRG1Q6ZUI0 275 aa12.17□□□□□ -0.46
CSMD1-210ENST00000521646 ZBTB44Q8NCP5 570 aa12.17□□□□□ -0.46
CSMD1-210ENST00000521646 MCPH1Q8NEM0 835 aa12.17□□□□□ -0.46
CSMD1-210ENST00000521646 CLDN23Q96B33 292 aa12.17□□□□□ -0.46
CSMD1-210ENST00000521646 ZBTB45Q96K62 511 aaPredicted RBP12.17□□□□□ -0.46
CSMD1-210ENST00000521646 RUSC1Q9BVN2 902 aa12.17□□□□□ -0.46
CSMD1-210ENST00000521646 CRISPLD1Q9H336 500 aa12.17□□□□□ -0.46
CSMD1-210ENST00000521646 SPATA6Q9NWH7 488 aaPredicted RBP12.17□□□□□ -0.46
CSMD1-210ENST00000521646 CACNA1BQ00975 2339 aa12.16□□□□□ -0.46
CSMD1-210ENST00000521646 ARHGEF37A1IGU5 675 aa12.16□□□□□ -0.46
CSMD1-210ENST00000521646 RFX1P22670 979 aa12.16□□□□□ -0.46
CSMD1-210ENST00000521646 CDC25AP30304 524 aa12.16□□□□□ -0.46
CSMD1-210ENST00000521646 CREMQ03060 361 aa12.16□□□□□ -0.46
CSMD1-210ENST00000521646 CSTF1Q05048 431 aaKnown RBP12.16□□□□□ -0.46
CSMD1-210ENST00000521646 DMWDQ09019 674 aa12.16□□□□□ -0.46
CSMD1-210ENST00000521646 NCBP1Q09161 790 aaKnown RBP12.16□□□□□ -0.46
CSMD1-210ENST00000521646 MTAPQ13126 283 aa12.16□□□□□ -0.46
CSMD1-210ENST00000521646 MRPL58Q14197 206 aaKnown RBP12.16□□□□□ -0.46
CSMD1-210ENST00000521646 MAPK6Q16659 721 aa12.16□□□□□ -0.46
CSMD1-210ENST00000521646 RSPO4Q2I0M5 234 aaPredicted RBP12.16□□□□□ -0.46
CSMD1-210ENST00000521646 FAM78AQ5JUQ0 283 aa12.16□□□□□ -0.46
CSMD1-210ENST00000521646 LCE2AQ5TA79 106 aaPredicted RBP12.16□□□□□ -0.46
CSMD1-210ENST00000521646 ATF7IP2Q5U623 682 aa12.16□□□□□ -0.46
CSMD1-210ENST00000521646 SLC8B1Q6J4K2 584 aa12.16□□□□□ -0.46
CSMD1-210ENST00000521646 DGLUCYQ7Z3D6 616 aa12.16□□□□□ -0.46
CSMD1-210ENST00000521646 ZBTB8OSQ8IWT0 167 aa12.16□□□□□ -0.46
CSMD1-210ENST00000521646 HACE1Q8IYU2 909 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms