RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 VARS2Q5ST30 1063 aaKnown RBP10.22□□□□□ -0.77
CLK4-209ENST00000521621 ZNF280DQ6N043 979 aa10.22□□□□□ -0.77
CLK4-209ENST00000521621 TCEAL8Q8IYN2 117 aa10.22□□□□□ -0.77
CLK4-209ENST00000521621 ADSSL1Q8N142 457 aa10.22□□□□□ -0.77
CLK4-209ENST00000521621 ANKRD36BP1Q96IX9 119 aa10.22□□□□□ -0.77
CLK4-209ENST00000521621 GZF1Q9H116 711 aaPredicted RBP10.22□□□□□ -0.77
CLK4-209ENST00000521621 ZFP37Q9Y6Q3 630 aaPredicted RBP10.22□□□□□ -0.77
CLK4-209ENST00000521621 NR3C1P04150 777 aa10.22□□□□□ -0.77
CLK4-209ENST00000521621 KCNA5P22460 613 aa10.22□□□□□ -0.77
CLK4-209ENST00000521621 GTF2F1P35269 517 aaKnown RBP eCLIP10.22□□□□□ -0.77
CLK4-209ENST00000521621 DLX2Q07687 328 aaPredicted RBP10.22□□□□□ -0.77
CLK4-209ENST00000521621 CCDC149Q6ZUS6 474 aa10.22□□□□□ -0.77
CLK4-209ENST00000521621 ZDHHC14Q8IZN3 488 aa10.22□□□□□ -0.77
CLK4-209ENST00000521621 C1orf127Q8N9H9 656 aa10.22□□□□□ -0.77
CLK4-209ENST00000521621 ZNF461Q8TAF7 563 aa10.22□□□□□ -0.77
CLK4-209ENST00000521621 PHF7Q9BWX1 381 aaPredicted RBP10.22□□□□□ -0.77
CLK4-209ENST00000521621 GOLGA2P5Q9HBQ8 144 aa10.22□□□□□ -0.77
CLK4-209ENST00000521621 TNNC2P02585 160 aa10.21□□□□□ -0.77
CLK4-209ENST00000521621 TKTP29401 623 aaKnown RBP10.21□□□□□ -0.77
CLK4-209ENST00000521621 SKIV2LQ15477 1246 aaKnown RBP10.21□□□□□ -0.77
CLK4-209ENST00000521621 INTS8Q75QN2 995 aaKnown RBP10.21□□□□□ -0.77
CLK4-209ENST00000521621 SAAL1Q96ER3 474 aa10.21□□□□□ -0.77
CLK4-209ENST00000521621 IKZF4Q9H2S9 585 aa10.21□□□□□ -0.77
CLK4-209ENST00000521621 AFF4Q9UHB7 1163 aaKnown RBP10.21□□□□□ -0.77
CLK4-209ENST00000521621 NUB1Q9Y5A7 615 aa10.21□□□□□ -0.77
CLK4-209ENST00000521621 PCDHA5Q9Y5H7 936 aa10.21□□□□□ -0.77
CLK4-209ENST00000521621 CHD7Q9P2D1 2997 aa10.21□□□□□ -0.77
CLK4-209ENST00000521621 LAMA3Q16787 3333 aa10.21□□□□□ -0.77
CLK4-209ENST00000521621 SOBPA7XYQ1 873 aa10.21□□□□□ -0.78
CLK4-209ENST00000521621 TGM5O43548 720 aa10.21□□□□□ -0.78
CLK4-209ENST00000521621 STX10O60499 249 aa10.21□□□□□ -0.78
CLK4-209ENST00000521621 TACC1O75410 805 aa10.21□□□□□ -0.78
CLK4-209ENST00000521621 MCM4P33991 863 aa10.21□□□□□ -0.78
CLK4-209ENST00000521621 ZP2Q05996 745 aa10.21□□□□□ -0.78
CLK4-209ENST00000521621 PNOCQ13519 176 aa10.21□□□□□ -0.78
CLK4-209ENST00000521621 CBWD2Q8IUF1 395 aa10.21□□□□□ -0.78
CLK4-209ENST00000521621 PARD3BQ8TEW8 1205 aa10.21□□□□□ -0.78
CLK4-209ENST00000521621 PPM1EQ8WY54 764 aa10.21□□□□□ -0.78
CLK4-209ENST00000521621 GBP4Q96PP9 640 aa10.21□□□□□ -0.78
CLK4-209ENST00000521621 SIX4Q9UIU6 781 aa10.21□□□□□ -0.78
CLK4-209ENST00000521621 NR2E1Q9Y466 385 aa10.21□□□□□ -0.78
CLK4-209ENST00000521621 USP15Q9Y4E8 981 aaPredicted RBP10.21□□□□□ -0.78
CLK4-209ENST00000521621 PRRC2BQ5JSZ5 2229 aaKnown RBP10.21□□□□□ -0.78
CLK4-209ENST00000521621 KPNA7A9QM74 516 aa10.2□□□□□ -0.78
CLK4-209ENST00000521621 GABRDO14764 452 aa10.2□□□□□ -0.78
CLK4-209ENST00000521621 PER2O15055 1255 aa10.2□□□□□ -0.78
CLK4-209ENST00000521621 GADD45BO75293 160 aaPredicted RBP10.2□□□□□ -0.78
CLK4-209ENST00000521621 EPCAMP16422 314 aa10.2□□□□□ -0.78
CLK4-209ENST00000521621 BRCC3P46736 316 aa10.2□□□□□ -0.78
CLK4-209ENST00000521621 WNT7BP56706 349 aa10.2□□□□□ -0.78
CLK4-209ENST00000521621 GPR17Q13304 367 aa10.2□□□□□ -0.78
CLK4-209ENST00000521621 PLD1Q13393 1074 aa10.2□□□□□ -0.78
CLK4-209ENST00000521621 CES5AQ6NT32 575 aa10.2□□□□□ -0.78
CLK4-209ENST00000521621 LEMD2Q8NC56 503 aa10.2□□□□□ -0.78
CLK4-209ENST00000521621 ADAMTS19Q8TE59 1207 aa10.2□□□□□ -0.78
CLK4-209ENST00000521621 SENP8Q96LD8 212 aa10.2□□□□□ -0.78
CLK4-209ENST00000521621 CEP63Q96MT8 703 aa10.2□□□□□ -0.78
CLK4-209ENST00000521621 PRKD2Q9BZL6 878 aa10.2□□□□□ -0.78
CLK4-209ENST00000521621 ZCWPW1Q9H0M4 648 aa10.2□□□□□ -0.78
CLK4-209ENST00000521621 IGFLR1Q9H665 355 aa10.2□□□□□ -0.78
CLK4-209ENST00000521621 FBXL5Q9UKA1 691 aa10.2□□□□□ -0.78
CLK4-209ENST00000521621 EXOC3O60645 756 aa10.2□□□□□ -0.78
CLK4-209ENST00000521621 C4BPAP04003 597 aaKnown RBP10.2□□□□□ -0.78
CLK4-209ENST00000521621 ATF2P15336 505 aa10.2□□□□□ -0.78
CLK4-209ENST00000521621 MARSP56192 900 aaKnown RBP10.2□□□□□ -0.78
CLK4-209ENST00000521621 YWHAHQ04917 246 aaPredicted RBP10.2□□□□□ -0.78
CLK4-209ENST00000521621 MYO1EQ12965 1108 aa10.2□□□□□ -0.78
CLK4-209ENST00000521621 STIM1Q13586 685 aa10.2□□□□□ -0.78
CLK4-209ENST00000521621 RBM23Q86U06 439 aaKnown RBP10.2□□□□□ -0.78
CLK4-209ENST00000521621 ZSWIM2Q8NEG5 633 aa10.2□□□□□ -0.78
CLK4-209ENST00000521621 AUTS2Q8WXX7 1259 aa10.2□□□□□ -0.78
CLK4-209ENST00000521621 ZNF707Q96C28 371 aaPredicted RBP10.2□□□□□ -0.78
CLK4-209ENST00000521621 PCIF1Q9H4Z3 704 aa10.2□□□□□ -0.78
CLK4-209ENST00000521621 PDE11AQ9HCR9 933 aa10.2□□□□□ -0.78
CLK4-209ENST00000521621 ABCB6Q9NP58 842 aa10.2□□□□□ -0.78
CLK4-209ENST00000521621 MAN1C1Q9NR34 630 aa10.2□□□□□ -0.78
CLK4-209ENST00000521621 MAN1B1Q9UKM7 699 aa10.2□□□□□ -0.78
CLK4-209ENST00000521621 BARX2Q9UMQ3 279 aaPredicted RBP10.2□□□□□ -0.78
CLK4-209ENST00000521621 FRMD4BQ9Y2L6 1034 aa10.2□□□□□ -0.78
CLK4-209ENST00000521621 SPTLC1O15269 473 aa10.2□□□□□ -0.78
CLK4-209ENST00000521621 TMEM191BP0C7N4 346 aa10.2□□□□□ -0.78
CLK4-209ENST00000521621 WARSP23381 471 aaKnown RBP10.2□□□□□ -0.78
CLK4-209ENST00000521621 CCNE1P24864 410 aa10.2□□□□□ -0.78
CLK4-209ENST00000521621 WEE1P30291 646 aa10.2□□□□□ -0.78
CLK4-209ENST00000521621 PSMC2P35998 433 aaKnown RBP10.2□□□□□ -0.78
CLK4-209ENST00000521621 TFF2Q03403 129 aa10.2□□□□□ -0.78
CLK4-209ENST00000521621 RBM43Q6ZSC3 357 aaKnown RBP10.2□□□□□ -0.78
CLK4-209ENST00000521621 TRAPPC11Q7Z392 1133 aa10.2□□□□□ -0.78
CLK4-209ENST00000521621 METTL23Q86XA0 190 aa10.2□□□□□ -0.78
CLK4-209ENST00000521621 NELFCDQ8IXH7 590 aa10.2□□□□□ -0.78
CLK4-209ENST00000521621 KREMEN2Q8NCW0 462 aa10.2□□□□□ -0.78
CLK4-209ENST00000521621 TSG101Q99816 390 aa10.2□□□□□ -0.78
CLK4-209ENST00000521621 ACBD6Q9BR61 282 aa10.2□□□□□ -0.78
CLK4-209ENST00000521621 CLSTN2Q9H4D0 955 aa10.2□□□□□ -0.78
CLK4-209ENST00000521621 LMBRD1Q9NUN5 540 aa10.2□□□□□ -0.78
CLK4-209ENST00000521621 C2orf16Q68DN1 1984 aa10.19□□□□□ -0.78
CLK4-209ENST00000521621 PTPRJQ12913 1337 aa10.19□□□□□ -0.78
CLK4-209ENST00000521621 PRCPP42785 496 aa10.19□□□□□ -0.78
CLK4-209ENST00000521621 LHX1P48742 406 aa10.19□□□□□ -0.78
CLK4-209ENST00000521621 KCNQ1P51787 676 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms