RNA–Protein interactions for RNA: ENST00000521516.5

HMBOX1-208, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 2,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-208ENST00000521516 SRBD1Q8N5C6 995 aaKnown RBP8.44□□□□□ -1.06
HMBOX1-208ENST00000521516 SNIP1Q8TAD8 396 aaKnown RBP8.44□□□□□ -1.06
HMBOX1-208ENST00000521516 CHMP4BQ9H444 224 aaKnown RBP8.44□□□□□ -1.06
HMBOX1-208ENST00000521516 RIC8AQ9NPQ8 531 aa8.44□□□□□ -1.06
HMBOX1-208ENST00000521516 TCEAL9Q9UHQ7 104 aa8.44□□□□□ -1.06
HMBOX1-208ENST00000521516 MAFFQ9ULX9 164 aa8.44□□□□□ -1.06
HMBOX1-208ENST00000521516 SAMM50Q9Y512 469 aa8.44□□□□□ -1.06
HMBOX1-208ENST00000521516 ITPR3Q14573 2671 aa8.44□□□□□ -1.06
HMBOX1-208ENST00000521516 PLXND1Q9Y4D7 1925 aa8.44□□□□□ -1.06
HMBOX1-208ENST00000521516 AHCTF1Q8WYP5 2266 aa8.44□□□□□ -1.06
HMBOX1-208ENST00000521516 NUP210Q8TEM1 1887 aaPredicted RBP8.44□□□□□ -1.06
HMBOX1-208ENST00000521516 DPYSL4O14531 572 aa8.44□□□□□ -1.06
HMBOX1-208ENST00000521516 HLA-EP13747 358 aa8.44□□□□□ -1.06
HMBOX1-208ENST00000521516 SETQ01105 290 aaPredicted RBP8.44□□□□□ -1.06
HMBOX1-208ENST00000521516 TLE3Q04726 772 aa8.44□□□□□ -1.06
HMBOX1-208ENST00000521516 RUNX3Q13761 415 aa8.44□□□□□ -1.06
HMBOX1-208ENST00000521516 STXBP5Q5T5C0 1151 aa8.44□□□□□ -1.06
HMBOX1-208ENST00000521516 TPGS2Q68CL5 300 aa8.44□□□□□ -1.06
HMBOX1-208ENST00000521516 LMBRD2Q68DH5 695 aaPredicted RBP8.44□□□□□ -1.06
HMBOX1-208ENST00000521516 CD300LGQ6UXG3 332 aa8.44□□□□□ -1.06
HMBOX1-208ENST00000521516 GPIHBP1Q8IV16 184 aa8.44□□□□□ -1.06
HMBOX1-208ENST00000521516 JPH2Q9BR39 696 aaPredicted RBP8.44□□□□□ -1.06
HMBOX1-208ENST00000521516 KLK14Q9P0G3 267 aa8.44□□□□□ -1.06
HMBOX1-208ENST00000521516 TBX20Q9UMR3 447 aa8.44□□□□□ -1.06
HMBOX1-208ENST00000521516 SRPK3Q9UPE1 567 aa8.44□□□□□ -1.06
HMBOX1-208ENST00000521516 A0A1W2PRU2 124 aa8.43□□□□□ -1.06
HMBOX1-208ENST00000521516 TMEM150BA6NC51 233 aa8.43□□□□□ -1.06
HMBOX1-208ENST00000521516 IFIT3O14879 490 aaKnown RBP8.43□□□□□ -1.06
HMBOX1-208ENST00000521516 PLEKHA8P1O95397 391 aa8.43□□□□□ -1.06
HMBOX1-208ENST00000521516 PRAMEF12O95522 483 aa8.43□□□□□ -1.06
HMBOX1-208ENST00000521516 ATXN1LP0C7T5 689 aaKnown RBP8.43□□□□□ -1.06
HMBOX1-208ENST00000521516 TKTP29401 623 aaKnown RBP8.43□□□□□ -1.06
HMBOX1-208ENST00000521516 AMPD2Q01433 879 aa8.43□□□□□ -1.06
HMBOX1-208ENST00000521516 TWF1Q12792 350 aa8.43□□□□□ -1.06
HMBOX1-208ENST00000521516 AP3B2Q13367 1082 aa8.43□□□□□ -1.06
HMBOX1-208ENST00000521516 MAP7D1Q3KQU3 841 aa8.43□□□□□ -1.06
HMBOX1-208ENST00000521516 SPIRE2Q8WWL2 714 aa8.43□□□□□ -1.06
HMBOX1-208ENST00000521516 NXPE2Q96DL1 559 aa8.43□□□□□ -1.06
HMBOX1-208ENST00000521516 SPACA7Q96KW9 195 aa8.43□□□□□ -1.06
HMBOX1-208ENST00000521516 P2RY13Q9BPV8 354 aa8.43□□□□□ -1.06
HMBOX1-208ENST00000521516 FAM149AA5PLN7 773 aa8.42□□□□□ -1.06
HMBOX1-208ENST00000521516 PTGESO14684 152 aa8.42□□□□□ -1.06
HMBOX1-208ENST00000521516 ERLIN2O94905 339 aa8.42□□□□□ -1.06
HMBOX1-208ENST00000521516 SRGAP2CP0DJJ0 459 aa8.42□□□□□ -1.06
HMBOX1-208ENST00000521516 IGFBP6P24592 240 aaPredicted RBP8.42□□□□□ -1.06
HMBOX1-208ENST00000521516 CLK2P49760 499 aaKnown RBP8.42□□□□□ -1.06
HMBOX1-208ENST00000521516 GNAQP50148 359 aa8.42□□□□□ -1.06
HMBOX1-208ENST00000521516 ZNF574Q6ZN55 896 aaPredicted RBP8.42□□□□□ -1.06
HMBOX1-208ENST00000521516 FRMD1Q8N878 549 aa8.42□□□□□ -1.06
HMBOX1-208ENST00000521516 CTCFLQ8NI51 663 aaPredicted RBP8.42□□□□□ -1.06
HMBOX1-208ENST00000521516 PRPF31Q8WWY3 499 aaKnown RBP8.42□□□□□ -1.06
HMBOX1-208ENST00000521516 RLN3Q8WXF3 142 aa8.42□□□□□ -1.06
HMBOX1-208ENST00000521516 BAP1Q92560 729 aa8.42□□□□□ -1.06
HMBOX1-208ENST00000521516 MED8Q96G25 268 aa8.42□□□□□ -1.06
HMBOX1-208ENST00000521516 DSCC1Q9BVC3 393 aa8.42□□□□□ -1.06
HMBOX1-208ENST00000521516 GKN1Q9NS71 199 aa8.42□□□□□ -1.06
HMBOX1-208ENST00000521516 THG1LQ9NWX6 298 aaKnown RBP8.42□□□□□ -1.06
HMBOX1-208ENST00000521516 KNTC1P50748 2209 aa8.42□□□□□ -1.06
HMBOX1-208ENST00000521516 MYO16Q9Y6X6 1858 aa8.42□□□□□ -1.06
HMBOX1-208ENST00000521516 TERTO14746 1132 aaKnown RBP8.42□□□□□ -1.06
HMBOX1-208ENST00000521516 DDAH1O94760 285 aa8.42□□□□□ -1.06
HMBOX1-208ENST00000521516 ADSSP30520 456 aa8.42□□□□□ -1.06
HMBOX1-208ENST00000521516 SFNP31947 248 aa8.42□□□□□ -1.06
HMBOX1-208ENST00000521516 CXADRP78310 365 aa8.42□□□□□ -1.06
HMBOX1-208ENST00000521516 LAMTOR4Q0VGL1 99 aa8.42□□□□□ -1.06
HMBOX1-208ENST00000521516 LY6DQ14210 128 aa8.42□□□□□ -1.06
HMBOX1-208ENST00000521516 AMHR2Q16671 573 aa8.42□□□□□ -1.06
HMBOX1-208ENST00000521516 NAIF1Q69YI7 327 aaPredicted RBP8.42□□□□□ -1.06
HMBOX1-208ENST00000521516 TYW1BQ6NUM6 668 aa8.42□□□□□ -1.06
HMBOX1-208ENST00000521516 TTC9Q92623 222 aa8.42□□□□□ -1.06
HMBOX1-208ENST00000521516 EXOC4Q96A65 974 aa8.42□□□□□ -1.06
HMBOX1-208ENST00000521516 CPB2Q96IY4 423 aa8.42□□□□□ -1.06
HMBOX1-208ENST00000521516 SH2D3AQ9BRG2 576 aa8.42□□□□□ -1.06
HMBOX1-208ENST00000521516 POLR3CQ9BUI4 534 aaPredicted RBP8.42□□□□□ -1.06
HMBOX1-208ENST00000521516 ERICH2A1L162 156 aa8.41□□□□□ -1.06
HMBOX1-208ENST00000521516 PRKCBP05771 671 aa8.41□□□□□ -1.06
HMBOX1-208ENST00000521516 JAK3P52333 1124 aa8.41□□□□□ -1.06
HMBOX1-208ENST00000521516 HEATR3Q7Z4Q2 680 aa8.41□□□□□ -1.06
HMBOX1-208ENST00000521516 CCDC26Q8TAB7 109 aa8.41□□□□□ -1.06
HMBOX1-208ENST00000521516 USP33Q8TEY7 942 aa8.41□□□□□ -1.06
HMBOX1-208ENST00000521516 PSPC1Q8WXF1 523 aaKnown RBP8.41□□□□□ -1.06
HMBOX1-208ENST00000521516 TBC1D32Q96NH3 1257 aa8.41□□□□□ -1.06
HMBOX1-208ENST00000521516 CDC6Q99741 560 aa8.41□□□□□ -1.06
HMBOX1-208ENST00000521516 TRIM6Q9C030 488 aaPredicted RBP8.41□□□□□ -1.06
HMBOX1-208ENST00000521516 AFF4Q9UHB7 1163 aaKnown RBP8.41□□□□□ -1.06
HMBOX1-208ENST00000521516 MMP17Q9ULZ9 603 aa8.41□□□□□ -1.06
HMBOX1-208ENST00000521516 HELZP42694 1942 aaKnown RBP8.41□□□□□ -1.06
HMBOX1-208ENST00000521516 A0A1W2PQD8 194 aa8.41□□□□□ -1.06
HMBOX1-208ENST00000521516 hCG_1642624A0A1W2PR95 340 aa8.41□□□□□ -1.06
HMBOX1-208ENST00000521516 PLK4O00444 970 aa8.41□□□□□ -1.06
HMBOX1-208ENST00000521516 THP07101 528 aa8.41□□□□□ -1.06
HMBOX1-208ENST00000521516 HNRNPLP14866 589 aaKnown RBP eCLIP8.41□□□□□ -1.066e-9■■■■□ 22.1
HMBOX1-208ENST00000521516 BYSLQ13895 437 aaKnown RBP8.41□□□□□ -1.06
HMBOX1-208ENST00000521516 MRPL58Q14197 206 aaKnown RBP8.41□□□□□ -1.06
HMBOX1-208ENST00000521516 CRY1Q16526 586 aa8.41□□□□□ -1.06
HMBOX1-208ENST00000521516 PPP1R18Q6NYC8 613 aa8.41□□□□□ -1.06
HMBOX1-208ENST00000521516 DBX2Q6ZNG2 339 aa8.41□□□□□ -1.06
HMBOX1-208ENST00000521516 GAREM2Q75VX8 874 aa8.41□□□□□ -1.06
HMBOX1-208ENST00000521516 IFNLR1Q8IU57 520 aaPredicted RBP8.41□□□□□ -1.06
HMBOX1-208ENST00000521516 RDM1Q8NG50 284 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms