RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, human

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS13B-208	ENST00000521037	ZEB2	O60315	1214 aa		4.59	□□□□□ -1.67
VPS13B-208	ENST00000521037	DNAJC6	O75061	913 aa		4.59	□□□□□ -1.67
VPS13B-208	ENST00000521037	ARIH2	O95376	493 aa		4.59	□□□□□ -1.67
VPS13B-208	ENST00000521037	RB1	P06400	928 aa		4.59	□□□□□ -1.67
VPS13B-208	ENST00000521037	LDHC	P07864	332 aa		4.59	□□□□□ -1.67
VPS13B-208	ENST00000521037	MSL3P1	P0C860	447 aa		4.59	□□□□□ -1.67
VPS13B-208	ENST00000521037	CYP2D6	P10635	497 aa		4.59	□□□□□ -1.67
VPS13B-208	ENST00000521037	HOXC8	P31273	242 aa		4.59	□□□□□ -1.67
VPS13B-208	ENST00000521037	EIF4A3	P38919	411 aa	Known RBP	4.59	□□□□□ -1.67
VPS13B-208	ENST00000521037	NRIP1	P48552	1158 aa		4.59	□□□□□ -1.67
VPS13B-208	ENST00000521037	ADAM17	P78536	824 aa		4.59	□□□□□ -1.67
VPS13B-208	ENST00000521037	ZNF200	P98182	395 aa	Predicted RBP	4.59	□□□□□ -1.67
VPS13B-208	ENST00000521037	BFSP2	Q13515	415 aa		4.59	□□□□□ -1.67
VPS13B-208	ENST00000521037	DUSP6	Q16828	381 aa		4.59	□□□□□ -1.67
VPS13B-208	ENST00000521037	ARSH	Q5FYA8	562 aa		4.59	□□□□□ -1.67
VPS13B-208	ENST00000521037	IQSEC1	Q6DN90	963 aa		4.59	□□□□□ -1.67
VPS13B-208	ENST00000521037	SNRNP48	Q6IEG0	339 aa	Known RBP	4.59	□□□□□ -1.67
VPS13B-208	ENST00000521037	RELL1	Q8IUW5	271 aa		4.59	□□□□□ -1.67
VPS13B-208	ENST00000521037	CAGE1	Q8TC20	777 aa		4.59	□□□□□ -1.67
VPS13B-208	ENST00000521037	RIN2	Q8WYP3	895 aa	Predicted RBP	4.59	□□□□□ -1.67
VPS13B-208	ENST00000521037	DEPDC7	Q96QD5	511 aa		4.59	□□□□□ -1.67
VPS13B-208	ENST00000521037	GPR20	Q99678	358 aa		4.59	□□□□□ -1.67
VPS13B-208	ENST00000521037	MTG1	Q9BT17	334 aa	Predicted RBP	4.59	□□□□□ -1.67
VPS13B-208	ENST00000521037	TEX13B	Q9BXU2	312 aa		4.59	□□□□□ -1.67
VPS13B-208	ENST00000521037	KIAA1671	Q9BY89	1806 aa		4.59	□□□□□ -1.67
VPS13B-208	ENST00000521037	PCGF6	Q9BYE7	350 aa		4.59	□□□□□ -1.67
VPS13B-208	ENST00000521037	POMK	Q9H5K3	350 aa		4.59	□□□□□ -1.67
VPS13B-208	ENST00000521037	SLC38A10	Q9HBR0	1119 aa		4.59	□□□□□ -1.67
VPS13B-208	ENST00000521037	PCDH12	Q9NPG4	1184 aa		4.59	□□□□□ -1.67
VPS13B-208	ENST00000521037	FANCI	Q9NVI1	1328 aa		4.59	□□□□□ -1.67
VPS13B-208	ENST00000521037	GNL3L	Q9NVN8	582 aa	Known RBP	4.59	□□□□□ -1.67
VPS13B-208	ENST00000521037	KLHL42	Q9P2K6	505 aa		4.59	□□□□□ -1.67
VPS13B-208	ENST00000521037	EFR3B	Q9Y2G0	817 aa		4.59	□□□□□ -1.67
VPS13B-208	ENST00000521037	MYH1	P12882	1939 aa		4.58	□□□□□ -1.68
VPS13B-208	ENST00000521037	ATM	Q13315	3056 aa		4.58	□□□□□ -1.68
VPS13B-208	ENST00000521037	USP9X	Q93008	2570 aa	Predicted RBP	4.58	□□□□□ -1.68
VPS13B-208	ENST00000521037	SSU72P8	A0A1W2PR75	194 aa		4.58	□□□□□ -1.68
VPS13B-208	ENST00000521037	PER2	O15055	1255 aa		4.58	□□□□□ -1.68
VPS13B-208	ENST00000521037	NOBOX	O60393	691 aa		4.58	□□□□□ -1.68
VPS13B-208	ENST00000521037	TOP3B	O95985	862 aa	Known RBP	4.58	□□□□□ -1.68
VPS13B-208	ENST00000521037	ITGB3	P05106	788 aa		4.58	□□□□□ -1.68
VPS13B-208	ENST00000521037	TDGF1	P13385	188 aa		4.58	□□□□□ -1.68
VPS13B-208	ENST00000521037	EEF2	P13639	858 aa	Known RBP	4.58	□□□□□ -1.68
VPS13B-208	ENST00000521037	VAV1	P15498	845 aa		4.58	□□□□□ -1.68
VPS13B-208	ENST00000521037	SP100	P23497	879 aa	Predicted RBP	4.58	□□□□□ -1.68
VPS13B-208	ENST00000521037	POLR2B	P30876	1174 aa	Known RBP	4.58	□□□□□ -1.68
VPS13B-208	ENST00000521037	CTNNB1	P35222	781 aa		4.58	□□□□□ -1.68
VPS13B-208	ENST00000521037	NDUFV1	P49821	464 aa		4.58	□□□□□ -1.68
VPS13B-208	ENST00000521037	GSTO1	P78417	241 aa		4.58	□□□□□ -1.68
VPS13B-208	ENST00000521037	MPP2	Q14168	576 aa		4.58	□□□□□ -1.68
VPS13B-208	ENST00000521037	NR1I3	Q14994	352 aa		4.58	□□□□□ -1.68
VPS13B-208	ENST00000521037	PTGIS	Q16647	500 aa		4.58	□□□□□ -1.68
VPS13B-208	ENST00000521037	RTP2	Q5QGT7	225 aa		4.58	□□□□□ -1.68
VPS13B-208	ENST00000521037	FAM83B	Q5T0W9	1011 aa		4.58	□□□□□ -1.68
VPS13B-208	ENST00000521037	UBXN11	Q5T124	520 aa		4.58	□□□□□ -1.68
VPS13B-208	ENST00000521037	EEPD1	Q7L9B9	569 aa		4.58	□□□□□ -1.68
VPS13B-208	ENST00000521037	FILIP1	Q7Z7B0	1213 aa		4.58	□□□□□ -1.68
VPS13B-208	ENST00000521037	MYOCD	Q8IZQ8	938 aa		4.58	□□□□□ -1.68
VPS13B-208	ENST00000521037	ZBTB44	Q8NCP5	570 aa		4.58	□□□□□ -1.68
VPS13B-208	ENST00000521037	NUP43	Q8NFH3	380 aa		4.58	□□□□□ -1.68
VPS13B-208	ENST00000521037	DYNLL2	Q96FJ2	89 aa		4.58	□□□□□ -1.68
VPS13B-208	ENST00000521037	EAF1	Q96JC9	268 aa	Predicted RBP	4.58	□□□□□ -1.68
VPS13B-208	ENST00000521037	CHAMP1	Q96JM3	812 aa		4.58	□□□□□ -1.68
VPS13B-208	ENST00000521037	SPATA25	Q9BR10	227 aa		4.58	□□□□□ -1.68
VPS13B-208	ENST00000521037	C1QTNF3	Q9BXJ4	246 aa		4.58	□□□□□ -1.68
VPS13B-208	ENST00000521037	CNNM2	Q9H8M5	875 aa		4.58	□□□□□ -1.68
VPS13B-208	ENST00000521037	RAVER2	Q9HCJ3	691 aa	Known RBP	4.58	□□□□□ -1.68
VPS13B-208	ENST00000521037	CHST7	Q9NS84	486 aa		4.58	□□□□□ -1.68
VPS13B-208	ENST00000521037	IMPACT	Q9P2X3	320 aa		4.58	□□□□□ -1.68
VPS13B-208	ENST00000521037	ANGPTL2	Q9UKU9	493 aa		4.58	□□□□□ -1.68
VPS13B-208	ENST00000521037	MSRB2	Q9Y3D2	182 aa		4.58	□□□□□ -1.68
VPS13B-208	ENST00000521037	SUPT16H	Q9Y5B9	1047 aa	Known RBP	4.58	□□□□□ -1.68
VPS13B-208	ENST00000521037	HCFC2	Q9Y5Z7	792 aa		4.58	□□□□□ -1.68
VPS13B-208	ENST00000521037	DENND4A	Q7Z401	1863 aa		4.58	□□□□□ -1.68
VPS13B-208	ENST00000521037	PLXNA4	Q9HCM2	1894 aa		4.58	□□□□□ -1.68
VPS13B-208	ENST00000521037	NBPF19	A0A087WUL8	3843 aa		4.57	□□□□□ -1.68
VPS13B-208	ENST00000521037	MYO10	Q9HD67	2058 aa		4.57	□□□□□ -1.68
VPS13B-208	ENST00000521037	CACNA1F	O60840	1977 aa		4.57	□□□□□ -1.68
VPS13B-208	ENST00000521037	SHISA7	A6NL88	538 aa		4.57	□□□□□ -1.68
VPS13B-208	ENST00000521037	PRR5-ARHGAP8	B1AHC4	643 aa		4.57	□□□□□ -1.68
VPS13B-208	ENST00000521037	SUV39H1	O43463	412 aa		4.57	□□□□□ -1.68
VPS13B-208	ENST00000521037	NARS	O43776	548 aa	Known RBP	4.57	□□□□□ -1.68
VPS13B-208	ENST00000521037	EFCAB14	O75071	495 aa		4.57	□□□□□ -1.68
VPS13B-208	ENST00000521037	CDC45	O75419	566 aa		4.57	□□□□□ -1.68
VPS13B-208	ENST00000521037	C1QL1	O75973	258 aa		4.57	□□□□□ -1.68
VPS13B-208	ENST00000521037	EDNRB	P24530	442 aa		4.57	□□□□□ -1.68
VPS13B-208	ENST00000521037	GBP2	P32456	591 aa	Predicted RBP	4.57	□□□□□ -1.68
VPS13B-208	ENST00000521037	COPB2	P35606	906 aa		4.57	□□□□□ -1.68
VPS13B-208	ENST00000521037	ETFB	P38117	255 aa		4.57	□□□□□ -1.68
VPS13B-208	ENST00000521037	IL15	P40933	162 aa	Predicted RBP	4.57	□□□□□ -1.68
VPS13B-208	ENST00000521037	ARHGAP8	P85298	464 aa		4.57	□□□□□ -1.68
VPS13B-208	ENST00000521037	KRTAP1-1	Q07627	177 aa		4.57	□□□□□ -1.68
VPS13B-208	ENST00000521037	TFCP2	Q12800	502 aa		4.57	□□□□□ -1.68
VPS13B-208	ENST00000521037	TNNI3K	Q59H18	835 aa		4.57	□□□□□ -1.68
VPS13B-208	ENST00000521037	MUM1L1	Q5H9M0	696 aa		4.57	□□□□□ -1.68
VPS13B-208	ENST00000521037	NT5DC1	Q5TFE4	455 aa		4.57	□□□□□ -1.68
VPS13B-208	ENST00000521037	NAA16	Q6N069	864 aa	Predicted RBP	4.57	□□□□□ -1.68
VPS13B-208	ENST00000521037	ANKRD54	Q6NXT1	300 aa		4.57	□□□□□ -1.68
VPS13B-208	ENST00000521037	CCDC62	Q6P9F0	684 aa		4.57	□□□□□ -1.68
VPS13B-208	ENST00000521037	ZC3H14	Q6PJT7	736 aa	Known RBP	4.57	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 138.4 ms