RNA–Protein interactions for RNA: ENST00000520850.5

TNPO1-212, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-212ENST00000520850 BORCS6Q96GS4 357 aa17.6■□□□□ 0.41
TNPO1-212ENST00000520850 TSHZ2Q9NRE2 1034 aa17.6■□□□□ 0.41
TNPO1-212ENST00000520850 DSEQ9UL01 958 aa17.6■□□□□ 0.41
TNPO1-212ENST00000520850 MTCL1Q9Y4B5 1905 aaKnown RBP17.59■□□□□ 0.41
TNPO1-212ENST00000520850 TGM5O43548 720 aa17.59■□□□□ 0.41
TNPO1-212ENST00000520850 EXOC3O60645 756 aa17.59■□□□□ 0.41
TNPO1-212ENST00000520850 TAF6P49848 677 aa17.59■□□□□ 0.41
TNPO1-212ENST00000520850 RBP5P82980 135 aa17.59■□□□□ 0.41
TNPO1-212ENST00000520850 RBM10P98175 930 aaKnown RBP17.59■□□□□ 0.41
TNPO1-212ENST00000520850 TFAMQ00059 246 aaKnown RBP17.59■□□□□ 0.41
TNPO1-212ENST00000520850 ZCWPW2Q504Y3 356 aa17.59■□□□□ 0.41
TNPO1-212ENST00000520850 CENPPQ6IPU0 288 aa17.59■□□□□ 0.41
TNPO1-212ENST00000520850 CES5AQ6NT32 575 aa17.59■□□□□ 0.41
TNPO1-212ENST00000520850 LLGL2Q6P1M3 1020 aa17.59■□□□□ 0.41
TNPO1-212ENST00000520850 C1orf127Q8N9H9 656 aa17.59■□□□□ 0.41
TNPO1-212ENST00000520850 ZNF461Q8TAF7 563 aa17.59■□□□□ 0.41
TNPO1-212ENST00000520850 SPATA18Q8TC71 538 aa17.59■□□□□ 0.41
TNPO1-212ENST00000520850 ANKRD36BP1Q96IX9 119 aa17.59■□□□□ 0.41
TNPO1-212ENST00000520850 ZNF560Q96MR9 790 aa17.59■□□□□ 0.41
TNPO1-212ENST00000520850 NECTIN4Q96NY8 510 aa17.59■□□□□ 0.41
TNPO1-212ENST00000520850 SFXN1Q9H9B4 322 aa17.59■□□□□ 0.41
TNPO1-212ENST00000520850 ZDHHC7Q9NXF8 308 aa17.59■□□□□ 0.41
TNPO1-212ENST00000520850 IKBKBO14920 756 aa17.58■□□□□ 0.4
TNPO1-212ENST00000520850 ABLIM3O94929 683 aa17.58■□□□□ 0.4
TNPO1-212ENST00000520850 NR3C1P04150 777 aa17.58■□□□□ 0.4
TNPO1-212ENST00000520850 POU2F2P09086 479 aa17.58■□□□□ 0.4
TNPO1-212ENST00000520850 FAM163BP0C2L3 166 aa17.58■□□□□ 0.4
TNPO1-212ENST00000520850 CYP2J2P51589 502 aa17.58■□□□□ 0.4
TNPO1-212ENST00000520850 GUCY2FP51841 1108 aa17.58■□□□□ 0.4
TNPO1-212ENST00000520850 SV2CQ496J9 727 aa17.58■□□□□ 0.4
TNPO1-212ENST00000520850 TPGS2Q68CL5 300 aa17.58■□□□□ 0.4
TNPO1-212ENST00000520850 PARD3BQ8TEW8 1205 aa17.58■□□□□ 0.4
TNPO1-212ENST00000520850 SENP8Q96LD8 212 aa17.58■□□□□ 0.4
TNPO1-212ENST00000520850 FNBP1Q96RU3 617 aa17.58■□□□□ 0.4
TNPO1-212ENST00000520850 GDAP2Q9NXN4 497 aa17.58■□□□□ 0.4
TNPO1-212ENST00000520850 KPNA7A9QM74 516 aa17.57■□□□□ 0.4
TNPO1-212ENST00000520850 I3L4J1 428 aa17.57■□□□□ 0.4
TNPO1-212ENST00000520850 SPTLC1O15269 473 aa17.57■□□□□ 0.4
TNPO1-212ENST00000520850 TNNC2P02585 160 aa17.57■□□□□ 0.4
TNPO1-212ENST00000520850 TMEM191BP0C7N4 346 aa17.57■□□□□ 0.4
TNPO1-212ENST00000520850 ODC1P11926 461 aa17.57■□□□□ 0.4
TNPO1-212ENST00000520850 HOXA9P31269 272 aa17.57■□□□□ 0.4
TNPO1-212ENST00000520850 OR1D2P34982 312 aa17.57■□□□□ 0.4
TNPO1-212ENST00000520850 PRCPP42785 496 aa17.57■□□□□ 0.4
TNPO1-212ENST00000520850 MTHFRP42898 656 aa17.57■□□□□ 0.4
TNPO1-212ENST00000520850 YWHAHQ04917 246 aaPredicted RBP17.57■□□□□ 0.4
TNPO1-212ENST00000520850 ATAT1Q5SQI0 421 aa17.57■□□□□ 0.4
TNPO1-212ENST00000520850 ZNF280DQ6N043 979 aa17.57■□□□□ 0.4
TNPO1-212ENST00000520850 DSTYKQ6XUX3 929 aa17.57■□□□□ 0.4
TNPO1-212ENST00000520850 DPH6Q7L8W6 267 aa17.57■□□□□ 0.4
TNPO1-212ENST00000520850 GPR149Q86SP6 731 aa17.57■□□□□ 0.4
TNPO1-212ENST00000520850 USP37Q86T82 979 aa17.57■□□□□ 0.4
TNPO1-212ENST00000520850 CSGALNACT2Q8N6G5 542 aa17.57■□□□□ 0.4
TNPO1-212ENST00000520850 TRIML1Q8N9V2 468 aa17.57■□□□□ 0.4
TNPO1-212ENST00000520850 RDH13Q8NBN7 331 aa17.57■□□□□ 0.4
TNPO1-212ENST00000520850 KREMEN2Q8NCW0 462 aa17.57■□□□□ 0.4
TNPO1-212ENST00000520850 TMC2Q8TDI7 906 aa17.57■□□□□ 0.4
TNPO1-212ENST00000520850 ADAMTS19Q8TE59 1207 aa17.57■□□□□ 0.4
TNPO1-212ENST00000520850 RIPOR3Q96MK2 946 aa17.57■□□□□ 0.4
TNPO1-212ENST00000520850 GBP4Q96PP9 640 aa17.57■□□□□ 0.4
TNPO1-212ENST00000520850 POP1Q99575 1024 aaKnown RBP17.57■□□□□ 0.4
TNPO1-212ENST00000520850 CGRRF1Q99675 332 aa17.57■□□□□ 0.4
TNPO1-212ENST00000520850 MKNK1Q9BUB5 465 aa17.57■□□□□ 0.4
TNPO1-212ENST00000520850 FBXW11Q9UKB1 542 aa17.57■□□□□ 0.4
TNPO1-212ENST00000520850 FRMD4BQ9Y2L6 1034 aa17.57■□□□□ 0.4
TNPO1-212ENST00000520850 USP15Q9Y4E8 981 aaPredicted RBP17.57■□□□□ 0.4
TNPO1-212ENST00000520850 C19orf67A6NJJ6 358 aa17.56■□□□□ 0.4
TNPO1-212ENST00000520850 OR6C75A6NL08 312 aa17.56■□□□□ 0.4
TNPO1-212ENST00000520850 PPEF2O14830 753 aa17.56■□□□□ 0.4
TNPO1-212ENST00000520850 STAU1O95793 577 aaKnown RBP17.56■□□□□ 0.4
TNPO1-212ENST00000520850 ITGB3P05106 788 aa17.56■□□□□ 0.4
TNPO1-212ENST00000520850 HNRNPA1P09651 372 aaKnown RBP eCLIP17.56■□□□□ 0.4
TNPO1-212ENST00000520850 IL9P15248 144 aa17.56■□□□□ 0.4
TNPO1-212ENST00000520850 ATF2P15336 505 aa17.56■□□□□ 0.4
TNPO1-212ENST00000520850 RPL17P18621 184 aaKnown RBP17.56■□□□□ 0.4
TNPO1-212ENST00000520850 RSPO2Q6UXX9 243 aaPredicted RBP17.56■□□□□ 0.4
TNPO1-212ENST00000520850 TRAPPC11Q7Z392 1133 aa17.56■□□□□ 0.4
TNPO1-212ENST00000520850 PALB2Q86YC2 1186 aa17.56■□□□□ 0.4
TNPO1-212ENST00000520850 ADHFE1Q8IWW8 467 aa17.56■□□□□ 0.4
TNPO1-212ENST00000520850 ADSSL1Q8N142 457 aa17.56■□□□□ 0.4
TNPO1-212ENST00000520850 DHTKD1Q96HY7 919 aaPredicted RBP17.56■□□□□ 0.4
TNPO1-212ENST00000520850 COL25A1Q9BXS0 654 aaPredicted RBP17.56■□□□□ 0.4
TNPO1-212ENST00000520850 GZF1Q9H116 711 aaPredicted RBP17.56■□□□□ 0.4
TNPO1-212ENST00000520850 MAN1C1Q9NR34 630 aa17.56■□□□□ 0.4
TNPO1-212ENST00000520850 SIX4Q9UIU6 781 aa17.56■□□□□ 0.4
TNPO1-212ENST00000520850 FBXL5Q9UKA1 691 aa17.56■□□□□ 0.4
TNPO1-212ENST00000520850 AGAP1Q9UPQ3 857 aa17.56■□□□□ 0.4
TNPO1-212ENST00000520850 CDY1Q9Y6F8 540 aa17.56■□□□□ 0.4
TNPO1-212ENST00000520850 SCN1AP35498 2009 aa17.55■□□□□ 0.4
TNPO1-212ENST00000520850 ADAM12O43184 909 aa17.55■□□□□ 0.4
TNPO1-212ENST00000520850 ZMYND10O75800 440 aa17.55■□□□□ 0.4
TNPO1-212ENST00000520850 TNNI1P19237 187 aa17.55■□□□□ 0.4
TNPO1-212ENST00000520850 NR2F2P24468 414 aa17.55■□□□□ 0.4
TNPO1-212ENST00000520850 POLR2BP30876 1174 aaKnown RBP17.55■□□□□ 0.4
TNPO1-212ENST00000520850 LRRC63Q05C16 580 aa17.55■□□□□ 0.4
TNPO1-212ENST00000520850 MYO1EQ12965 1108 aa17.55■□□□□ 0.4
TNPO1-212ENST00000520850 ADAM9Q13443 819 aa17.55■□□□□ 0.4
TNPO1-212ENST00000520850 STIM1Q13586 685 aa17.55■□□□□ 0.4
TNPO1-212ENST00000520850 MORC3Q14149 939 aa17.55■□□□□ 0.4
TNPO1-212ENST00000520850 CBX2Q14781 532 aaPredicted RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms