RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-208	ENST00000520580	ARL4A	P40617	200 aa		4.16	□□□□□ -1.74
SREK1-208	ENST00000520580	PAPOLA	P51003	745 aa	Known RBP	4.16	□□□□□ -1.74
SREK1-208	ENST00000520580	CASP6	P55212	293 aa		4.16	□□□□□ -1.74
SREK1-208	ENST00000520580	UBE3A	Q05086	875 aa		4.16	□□□□□ -1.74
SREK1-208	ENST00000520580	RAB32	Q13637	225 aa		4.16	□□□□□ -1.74
SREK1-208	ENST00000520580	CR1L	Q2VPA4	569 aa		4.16	□□□□□ -1.74
SREK1-208	ENST00000520580	SLC44A4	Q53GD3	710 aa		4.16	□□□□□ -1.74
SREK1-208	ENST00000520580	MFSD4B	Q5TF39	518 aa		4.16	□□□□□ -1.74
SREK1-208	ENST00000520580	RAP1GAP2	Q684P5	730 aa		4.16	□□□□□ -1.74
SREK1-208	ENST00000520580	ZNF787	Q6DD87	383 aa		4.16	□□□□□ -1.74
SREK1-208	ENST00000520580	GRAMD4	Q6IC98	578 aa		4.16	□□□□□ -1.74
SREK1-208	ENST00000520580	TANGO2	Q6ICL3	276 aa		4.16	□□□□□ -1.74
SREK1-208	ENST00000520580	CRTC1	Q6UUV9	634 aa		4.16	□□□□□ -1.74
SREK1-208	ENST00000520580	ETV3L	Q6ZN32	361 aa		4.16	□□□□□ -1.74
SREK1-208	ENST00000520580	STPG3	Q8N7X2	389 aa		4.16	□□□□□ -1.74
SREK1-208	ENST00000520580	WDR92	Q96MX6	357 aa		4.16	□□□□□ -1.74
SREK1-208	ENST00000520580	GDF15	Q99988	308 aa		4.16	□□□□□ -1.74
SREK1-208	ENST00000520580	ZNF518B	Q9C0D4	1074 aa		4.16	□□□□□ -1.74
SREK1-208	ENST00000520580	HAPLN2	Q9GZV7	340 aa		4.16	□□□□□ -1.74
SREK1-208	ENST00000520580	KRT84	Q9NSB2	600 aa		4.16	□□□□□ -1.74
SREK1-208	ENST00000520580	ORC3	Q9UBD5	711 aa	Predicted RBP	4.16	□□□□□ -1.74
SREK1-208	ENST00000520580	LPAR3	Q9UBY5	353 aa		4.16	□□□□□ -1.74
SREK1-208	ENST00000520580	ZFP69B	Q9UJL9	534 aa		4.16	□□□□□ -1.74
SREK1-208	ENST00000520580	PGPEP1L	A6NFU8	196 aa		4.15	□□□□□ -1.75
SREK1-208	ENST00000520580	CLCA1	A8K7I4	914 aa		4.15	□□□□□ -1.75
SREK1-208	ENST00000520580	ZBED4	O75132	1171 aa		4.15	□□□□□ -1.75
SREK1-208	ENST00000520580	KRT38	O76015	456 aa		4.15	□□□□□ -1.75
SREK1-208	ENST00000520580	INMT	O95050	263 aa		4.15	□□□□□ -1.75
SREK1-208	ENST00000520580	UNC5C	O95185	931 aa		4.15	□□□□□ -1.75
SREK1-208	ENST00000520580	RTN3	O95197	1032 aa	Predicted RBP	4.15	□□□□□ -1.75
SREK1-208	ENST00000520580	DDX58	O95786	925 aa	Known RBP	4.15	□□□□□ -1.75
SREK1-208	ENST00000520580	CYBB	P04839	570 aa		4.15	□□□□□ -1.75
SREK1-208	ENST00000520580	LTA4H	P09960	611 aa	Known RBP	4.15	□□□□□ -1.75
SREK1-208	ENST00000520580	GAA	P10253	952 aa		4.15	□□□□□ -1.75
SREK1-208	ENST00000520580	ALOX15	P16050	662 aa	Predicted RBP	4.15	□□□□□ -1.75
SREK1-208	ENST00000520580	HOXD12	P35452	270 aa		4.15	□□□□□ -1.75
SREK1-208	ENST00000520580	ALDH1A3	P47895	512 aa		4.15	□□□□□ -1.75
SREK1-208	ENST00000520580	NPTX2	P47972	431 aa		4.15	□□□□□ -1.75
SREK1-208	ENST00000520580	PSMC1	P62191	440 aa	Known RBP	4.15	□□□□□ -1.75
SREK1-208	ENST00000520580	MTM1	Q13496	603 aa		4.15	□□□□□ -1.75
SREK1-208	ENST00000520580	MYBPC2	Q14324	1141 aa		4.15	□□□□□ -1.75
SREK1-208	ENST00000520580	MEA1	Q16626	185 aa		4.15	□□□□□ -1.75
SREK1-208	ENST00000520580	SLC9C2	Q5TAH2	1124 aa		4.15	□□□□□ -1.75
SREK1-208	ENST00000520580	PAQR3	Q6TCH7	311 aa		4.15	□□□□□ -1.75
SREK1-208	ENST00000520580	KRT77	Q7Z794	578 aa		4.15	□□□□□ -1.75
SREK1-208	ENST00000520580	GATAD2A	Q86YP4	633 aa		4.15	□□□□□ -1.75
SREK1-208	ENST00000520580	CREBRF	Q8IUR6	639 aa		4.15	□□□□□ -1.75
SREK1-208	ENST00000520580	BCL6B	Q8N143	479 aa	Predicted RBP	4.15	□□□□□ -1.75
SREK1-208	ENST00000520580	DNAJC5G	Q8N7S2	189 aa		4.15	□□□□□ -1.75
SREK1-208	ENST00000520580	VGLL2	Q8N8G2	317 aa		4.15	□□□□□ -1.75
SREK1-208	ENST00000520580	SPPL3	Q8TCT6	385 aa		4.15	□□□□□ -1.75
SREK1-208	ENST00000520580	ZNF480	Q8WV37	535 aa		4.15	□□□□□ -1.75
SREK1-208	ENST00000520580	RSRC1	Q96IZ7	334 aa	Known RBP	4.15	□□□□□ -1.75
SREK1-208	ENST00000520580	KRTAP9-8	Q9BYQ0	159 aa		4.15	□□□□□ -1.75
SREK1-208	ENST00000520580	AGXT2	Q9BYV1	514 aa		4.15	□□□□□ -1.75
SREK1-208	ENST00000520580	PAIP1	Q9H074	479 aa	Known RBP	4.15	□□□□□ -1.75
SREK1-208	ENST00000520580	PCDHAC1	Q9H158	963 aa		4.15	□□□□□ -1.75
SREK1-208	ENST00000520580	PABPC3	Q9H361	631 aa	Known RBP	4.15	□□□□□ -1.75
SREK1-208	ENST00000520580	PREB	Q9HCU5	417 aa		4.15	□□□□□ -1.75
SREK1-208	ENST00000520580	NECTIN3	Q9NQS3	549 aa		4.15	□□□□□ -1.75
SREK1-208	ENST00000520580	LANCL2	Q9NS86	450 aa		4.15	□□□□□ -1.75
SREK1-208	ENST00000520580	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	4.15	□□□□□ -1.75
SREK1-208	ENST00000520580	TMEM140	Q9NV12	185 aa		4.15	□□□□□ -1.75
SREK1-208	ENST00000520580	DNPH1	O43598	174 aa		4.14	□□□□□ -1.75
SREK1-208	ENST00000520580	DOK2	O60496	412 aa		4.14	□□□□□ -1.75
SREK1-208	ENST00000520580	COBL	O75128	1261 aa		4.14	□□□□□ -1.75
SREK1-208	ENST00000520580	ACTL6B	O94805	426 aa		4.14	□□□□□ -1.75
SREK1-208	ENST00000520580	HNRNPA1	P09651	372 aa	Known RBP eCLIP	4.14	□□□□□ -1.75
SREK1-208	ENST00000520580	FTH1P19	P0C7X4	201 aa		4.14	□□□□□ -1.75
SREK1-208	ENST00000520580	PECAM1	P16284	738 aa	Predicted RBP	4.14	□□□□□ -1.75
SREK1-208	ENST00000520580	HOXA10	P31260	410 aa	Predicted RBP	4.14	□□□□□ -1.75
SREK1-208	ENST00000520580	ATXN1	P54253	815 aa	Known RBP	4.14	□□□□□ -1.75
SREK1-208	ENST00000520580	UCP3	P55916	312 aa		4.14	□□□□□ -1.75
SREK1-208	ENST00000520580	CHRNE	Q04844	493 aa		4.14	□□□□□ -1.75
SREK1-208	ENST00000520580	CACNB2	Q08289	660 aa	Predicted RBP	4.14	□□□□□ -1.75
SREK1-208	ENST00000520580	HABP2	Q14520	560 aa	Predicted RBP	4.14	□□□□□ -1.75
SREK1-208	ENST00000520580	TST	Q16762	297 aa	Known RBP	4.14	□□□□□ -1.75
SREK1-208	ENST00000520580	FAM133B	Q5BKY9	247 aa	Known RBP	4.14	□□□□□ -1.75
SREK1-208	ENST00000520580	TMTC4	Q5T4D3	741 aa		4.14	□□□□□ -1.75
SREK1-208	ENST00000520580	LCE2A	Q5TA79	106 aa	Predicted RBP	4.14	□□□□□ -1.75
SREK1-208	ENST00000520580	LMBRD2	Q68DH5	695 aa	Predicted RBP	4.14	□□□□□ -1.75
SREK1-208	ENST00000520580	PDZD8	Q8NEN9	1154 aa		4.14	□□□□□ -1.75
SREK1-208	ENST00000520580	OR7D4	Q8NG98	312 aa		4.14	□□□□□ -1.75
SREK1-208	ENST00000520580	CEP70	Q8NHQ1	597 aa		4.14	□□□□□ -1.75
SREK1-208	ENST00000520580	PPP1R14C	Q8TAE6	165 aa		4.14	□□□□□ -1.75
SREK1-208	ENST00000520580	MDM1	Q8TC05	714 aa		4.14	□□□□□ -1.75
SREK1-208	ENST00000520580	CPT1C	Q8TCG5	803 aa		4.14	□□□□□ -1.75
SREK1-208	ENST00000520580	KCNG4	Q8TDN1	519 aa		4.14	□□□□□ -1.75
SREK1-208	ENST00000520580	PAWR	Q96IZ0	340 aa	Known RBP	4.14	□□□□□ -1.75
SREK1-208	ENST00000520580	JMJD4	Q9H9V9	463 aa		4.14	□□□□□ -1.75
SREK1-208	ENST00000520580	BCO1	Q9HAY6	547 aa		4.14	□□□□□ -1.75
SREK1-208	ENST00000520580	TNFRSF12A	Q9NP84	129 aa		4.14	□□□□□ -1.75
SREK1-208	ENST00000520580	HEYL	Q9NQ87	328 aa	Predicted RBP	4.14	□□□□□ -1.75
SREK1-208	ENST00000520580	ING3	Q9NXR8	418 aa		4.14	□□□□□ -1.75
SREK1-208	ENST00000520580	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	4.14	□□□□□ -1.75
SREK1-208	ENST00000520580	PRSS29P	A6NIE9	313 aa		4.14	□□□□□ -1.75
SREK1-208	ENST00000520580	GRM6	O15303	877 aa		4.14	□□□□□ -1.75
SREK1-208	ENST00000520580	USO1	O60763	962 aa	Known RBP	4.14	□□□□□ -1.75
SREK1-208	ENST00000520580	ITGA5	P08648	1049 aa		4.14	□□□□□ -1.75
SREK1-208	ENST00000520580	RAP2A	P10114	183 aa		4.14	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms