RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 FSD1LQ9BXM9 530 aa12.71□□□□□ -0.37
ERGIC1-208ENST00000520399 PITPNM3Q9BZ71 974 aa12.71□□□□□ -0.37
ERGIC1-208ENST00000520399 KLHL31Q9H511 634 aa12.71□□□□□ -0.37
ERGIC1-208ENST00000520399 SH3GLB1Q9Y371 365 aa12.71□□□□□ -0.37
ERGIC1-208ENST00000520399 MTTPP55157 894 aa12.71□□□□□ -0.38
ERGIC1-208ENST00000520399 RHOT1Q8IXI2 618 aa12.71□□□□□ -0.38
ERGIC1-208ENST00000520399 TTC17Q96AE7 1141 aa12.71□□□□□ -0.38
ERGIC1-208ENST00000520399 CCSER1Q9C0I3 900 aa12.71□□□□□ -0.38
ERGIC1-208ENST00000520399 PARVAQ9NVD7 372 aa12.71□□□□□ -0.38
ERGIC1-208ENST00000520399 HDAC6Q9UBN7 1215 aa12.71□□□□□ -0.38
ERGIC1-208ENST00000520399 HEY1Q9Y5J3 304 aa12.71□□□□□ -0.38
ERGIC1-208ENST00000520399 ASB14A6NK59 587 aa12.71□□□□□ -0.38
ERGIC1-208ENST00000520399 H2AFXP16104 143 aaPredicted RBP12.71□□□□□ -0.38
ERGIC1-208ENST00000520399 S100A5P33763 92 aa12.71□□□□□ -0.38
ERGIC1-208ENST00000520399 RGS9BPQ6ZS82 235 aa12.71□□□□□ -0.38
ERGIC1-208ENST00000520399 HAUS6Q7Z4H7 955 aa12.71□□□□□ -0.38
ERGIC1-208ENST00000520399 CDKL3Q8IVW4 592 aaPredicted RBP12.71□□□□□ -0.38
ERGIC1-208ENST00000520399 RFFLQ8WZ73 363 aa12.71□□□□□ -0.38
ERGIC1-208ENST00000520399 TRAPPC9Q96Q05 1148 aa12.71□□□□□ -0.38
ERGIC1-208ENST00000520399 FAM217BQ9NTX9 383 aaPredicted RBP12.71□□□□□ -0.38
ERGIC1-208ENST00000520399 PCDHGB4Q9UN71 923 aa12.71□□□□□ -0.38
ERGIC1-208ENST00000520399 ARL4DP49703 201 aa12.7□□□□□ -0.38
ERGIC1-208ENST00000520399 MYBPC2Q14324 1141 aa12.7□□□□□ -0.38
ERGIC1-208ENST00000520399 ZNF746Q6NUN9 644 aaPredicted RBP12.7□□□□□ -0.38
ERGIC1-208ENST00000520399 TRIM69Q86WT6 500 aa12.7□□□□□ -0.38
ERGIC1-208ENST00000520399 LINC00116Q8NCU8 138 aa12.7□□□□□ -0.38
ERGIC1-208ENST00000520399 MAGEB5Q9BZ81 275 aa12.7□□□□□ -0.38
ERGIC1-208ENST00000520399 SLITRK6Q9H5Y7 841 aa12.7□□□□□ -0.38
ERGIC1-208ENST00000520399 JPH1Q9HDC5 661 aaPredicted RBP12.7□□□□□ -0.38
ERGIC1-208ENST00000520399 ITIH6Q6UXX5 1313 aa12.7□□□□□ -0.38
ERGIC1-208ENST00000520399 SETD1BQ9UPS6 1966 aaKnown RBP12.7□□□□□ -0.38
ERGIC1-208ENST00000520399 SPDYE5A6NIY4 337 aa12.7□□□□□ -0.38
ERGIC1-208ENST00000520399 KIAA0391O15091 583 aaKnown RBP12.7□□□□□ -0.38
ERGIC1-208ENST00000520399 RTN2O75298 545 aa12.7□□□□□ -0.38
ERGIC1-208ENST00000520399 ATP1A1P05023 1023 aaKnown RBP12.7□□□□□ -0.38
ERGIC1-208ENST00000520399 TRIM49P0CI25 452 aa12.7□□□□□ -0.38
ERGIC1-208ENST00000520399 TRIM49CP0CI26 452 aa12.7□□□□□ -0.38
ERGIC1-208ENST00000520399 RAB14P61106 215 aa12.7□□□□□ -0.38
ERGIC1-208ENST00000520399 TMPRSS15P98073 1019 aa12.7□□□□□ -0.38
ERGIC1-208ENST00000520399 SPDYE7PQ495Y7 208 aa12.7□□□□□ -0.38
ERGIC1-208ENST00000520399 OTUD5Q96G74 571 aa12.7□□□□□ -0.38
ERGIC1-208ENST00000520399 YIPF2Q9BWQ6 316 aa12.7□□□□□ -0.38
ERGIC1-208ENST00000520399 STAP1Q9ULZ2 295 aa12.7□□□□□ -0.38
ERGIC1-208ENST00000520399 LZTS3O60299 673 aaPredicted RBP12.7□□□□□ -0.38
ERGIC1-208ENST00000520399 FAM107AO95990 144 aa12.7□□□□□ -0.38
ERGIC1-208ENST00000520399 MAGEA8P43361 318 aa12.7□□□□□ -0.38
ERGIC1-208ENST00000520399 MTMR2Q13614 643 aa12.7□□□□□ -0.38
ERGIC1-208ENST00000520399 TKFCQ3LXA3 575 aa12.7□□□□□ -0.38
ERGIC1-208ENST00000520399 ZCWPW2Q504Y3 356 aa12.7□□□□□ -0.38
ERGIC1-208ENST00000520399 TTC8Q8TAM2 541 aa12.7□□□□□ -0.38
ERGIC1-208ENST00000520399 DDI1Q8WTU0 396 aa12.7□□□□□ -0.38
ERGIC1-208ENST00000520399 TUBGCP3Q96CW5 907 aa12.7□□□□□ -0.38
ERGIC1-208ENST00000520399 TMEM245Q9H330 911 aa12.7□□□□□ -0.38
ERGIC1-208ENST00000520399 TAF1DQ9H5J8 278 aaPredicted RBP12.7□□□□□ -0.38
ERGIC1-208ENST00000520399 C15orf41Q9Y2V0 281 aa12.7□□□□□ -0.38
ERGIC1-208ENST00000520399 E5RI56 91 aa12.7□□□□□ -0.38
ERGIC1-208ENST00000520399 CCDC142Q17RM4 750 aa12.7□□□□□ -0.38
ERGIC1-208ENST00000520399 KIRREL3Q8IZU9 778 aa12.7□□□□□ -0.38
ERGIC1-208ENST00000520399 TADA1Q96BN2 335 aa12.7□□□□□ -0.38
ERGIC1-208ENST00000520399 DNAJC7Q99615 494 aa12.7□□□□□ -0.38
ERGIC1-208ENST00000520399 RUBCNLQ9H714 662 aa12.7□□□□□ -0.38
ERGIC1-208ENST00000520399 H2AFY2Q9P0M6 372 aaPredicted RBP12.7□□□□□ -0.38
ERGIC1-208ENST00000520399 CORO1CQ9ULV4 474 aaPredicted RBP12.7□□□□□ -0.38
ERGIC1-208ENST00000520399 A0A1B0GTH6 734 aa12.69□□□□□ -0.38
ERGIC1-208ENST00000520399 ATP6V1G1O75348 118 aa12.69□□□□□ -0.38
ERGIC1-208ENST00000520399 TOMM70O94826 608 aa12.69□□□□□ -0.38
ERGIC1-208ENST00000520399 ADORA2BP29275 332 aa12.69□□□□□ -0.38
ERGIC1-208ENST00000520399 EFNA5P52803 228 aa12.69□□□□□ -0.38
ERGIC1-208ENST00000520399 VPS72Q15906 364 aa12.69□□□□□ -0.38
ERGIC1-208ENST00000520399 CYFIP1Q7L576 1253 aa12.69□□□□□ -0.38
ERGIC1-208ENST00000520399 ZNF555Q8NEP9 628 aa12.69□□□□□ -0.38
ERGIC1-208ENST00000520399 TRIM54Q9BYV2 358 aa12.69□□□□□ -0.38
ERGIC1-208ENST00000520399 NMT1P30419 496 aaKnown RBP12.69□□□□□ -0.38
ERGIC1-208ENST00000520399 HIPK4Q8NE63 616 aa12.69□□□□□ -0.38
ERGIC1-208ENST00000520399 CD163L1Q9NR16 1453 aa12.69□□□□□ -0.38
ERGIC1-208ENST00000520399 C5orf58C9J3I9 102 aa12.69□□□□□ -0.38
ERGIC1-208ENST00000520399 SMAPO00193 183 aa12.69□□□□□ -0.38
ERGIC1-208ENST00000520399 ZNF197O14709 1029 aa12.69□□□□□ -0.38
ERGIC1-208ENST00000520399 TBX3O15119 743 aa12.69□□□□□ -0.38
ERGIC1-208ENST00000520399 TEX28O15482 410 aa12.69□□□□□ -0.38
ERGIC1-208ENST00000520399 DDHD2O94830 711 aa12.69□□□□□ -0.38
ERGIC1-208ENST00000520399 DHX34Q14147 1143 aaKnown RBP12.69□□□□□ -0.38
ERGIC1-208ENST00000520399 R3HDM1Q15032 1099 aaKnown RBP12.69□□□□□ -0.38
ERGIC1-208ENST00000520399 PLD3Q8IV08 490 aa12.69□□□□□ -0.38
ERGIC1-208ENST00000520399 PPP1R14AQ96A00 147 aa12.69□□□□□ -0.38
ERGIC1-208ENST00000520399 ATAD3AQ9NVI7 634 aa12.69□□□□□ -0.38
ERGIC1-208ENST00000520399 NYAP2Q9P242 653 aa12.69□□□□□ -0.38
ERGIC1-208ENST00000520399 SPATA31A1Q5TZJ5 1347 aa12.69□□□□□ -0.38
ERGIC1-208ENST00000520399 GCLCP48506 637 aaPredicted RBP12.69□□□□□ -0.38
ERGIC1-208ENST00000520399 PKN3Q6P5Z2 889 aa12.69□□□□□ -0.38
ERGIC1-208ENST00000520399 ZNF554Q86TJ5 538 aa12.69□□□□□ -0.38
ERGIC1-208ENST00000520399 GLYCTKQ8IVS8 523 aa12.69□□□□□ -0.38
ERGIC1-208ENST00000520399 C19orf60Q96EN9 201 aa12.69□□□□□ -0.38
ERGIC1-208ENST00000520399 TRIM9Q9C026 710 aa12.69□□□□□ -0.38
ERGIC1-208ENST00000520399 SYNDIG1Q9H7V2 258 aa12.69□□□□□ -0.38
ERGIC1-208ENST00000520399 RNF181Q9P0P0 153 aa12.69□□□□□ -0.38
ERGIC1-208ENST00000520399 PCSK1NQ9UHG2 260 aa12.69□□□□□ -0.38
ERGIC1-208ENST00000520399 JCADQ9P266 1359 aa12.69□□□□□ -0.38
ERGIC1-208ENST00000520399 CFAP69A5D8W1 941 aa12.68□□□□□ -0.38
ERGIC1-208ENST00000520399 KRT6AP02538 564 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms