RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 HOXC6P09630 235 aa27.38■■□□□ 1.97
COL13A1-213ENST00000520267 GBP1P32455 592 aa27.38■■□□□ 1.97
COL13A1-213ENST00000520267 TAS2R40P59535 323 aa27.38■■□□□ 1.97
COL13A1-213ENST00000520267 C1QBPQ07021 282 aaKnown RBP27.38■■□□□ 1.97
COL13A1-213ENST00000520267 C9orf131Q5VYM1 1079 aa27.38■■□□□ 1.97
COL13A1-213ENST00000520267 EFCAB12Q6NXP0 572 aa27.38■■□□□ 1.97
COL13A1-213ENST00000520267 MPZL3Q6UWV2 235 aa27.38■■□□□ 1.97
COL13A1-213ENST00000520267 TSHZ1Q6ZSZ6 1077 aa27.38■■□□□ 1.97
COL13A1-213ENST00000520267 FZD8Q9H461 694 aa27.38■■□□□ 1.97
COL13A1-213ENST00000520267 MROH8Q9H579 483 aa27.38■■□□□ 1.97
COL13A1-213ENST00000520267 PARP2Q9UGN5 583 aa27.38■■□□□ 1.97
COL13A1-213ENST00000520267 INO80B-WBP1J3KQ70 363 aa27.38■■□□□ 1.97
COL13A1-213ENST00000520267 ZEB2O60315 1214 aa27.38■■□□□ 1.97
COL13A1-213ENST00000520267 SHBGP04278 402 aa27.38■■□□□ 1.97
COL13A1-213ENST00000520267 CLCN3P51790 818 aa27.38■■□□□ 1.97
COL13A1-213ENST00000520267 OSTNP61366 133 aa27.38■■□□□ 1.97
COL13A1-213ENST00000520267 KRT71Q3SY84 523 aa27.38■■□□□ 1.97
COL13A1-213ENST00000520267 AGBL2Q5U5Z8 902 aa27.38■■□□□ 1.97
COL13A1-213ENST00000520267 ATF7IP2Q5U623 682 aa27.38■■□□□ 1.97
COL13A1-213ENST00000520267 EEF1DP3Q658K8 133 aa27.38■■□□□ 1.97
COL13A1-213ENST00000520267 CEP120Q8N960 986 aa27.38■■□□□ 1.97
COL13A1-213ENST00000520267 ATG4AQ8WYN0 398 aa27.38■■□□□ 1.97
COL13A1-213ENST00000520267 RNF25Q96BH1 459 aaPredicted RBP27.38■■□□□ 1.97
COL13A1-213ENST00000520267 INO80BQ9C086 356 aaPredicted RBP27.38■■□□□ 1.97
COL13A1-213ENST00000520267 PABPC3Q9H361 631 aaKnown RBP27.38■■□□□ 1.97
COL13A1-213ENST00000520267 ACKR2O00590 384 aa27.37■■□□□ 1.97
COL13A1-213ENST00000520267 GJA5P36382 358 aa27.37■■□□□ 1.97
COL13A1-213ENST00000520267 TFAMQ00059 246 aaKnown RBP27.37■■□□□ 1.97
COL13A1-213ENST00000520267 ZNF394Q53GI3 561 aa27.37■■□□□ 1.97
COL13A1-213ENST00000520267 ART4Q93070 314 aa27.37■■□□□ 1.97
COL13A1-213ENST00000520267 NIF3L1Q9GZT8 377 aa27.37■■□□□ 1.97
COL13A1-213ENST00000520267 EFCC1Q9HA90 598 aa27.37■■□□□ 1.97
COL13A1-213ENST00000520267 CISHQ9NSE2 258 aa27.37■■□□□ 1.97
COL13A1-213ENST00000520267 LCMT1Q9UIC8 334 aa27.37■■□□□ 1.97
COL13A1-213ENST00000520267 TLR3O15455 904 aaKnown RBP27.37■■□□□ 1.97
COL13A1-213ENST00000520267 IFFO1Q0D2I5 559 aa27.37■■□□□ 1.97
COL13A1-213ENST00000520267 SURF1Q15526 300 aa27.37■■□□□ 1.97
COL13A1-213ENST00000520267 SGSM1Q2NKQ1 1148 aa27.37■■□□□ 1.97
COL13A1-213ENST00000520267 ZNF568Q3ZCX4 644 aa27.37■■□□□ 1.97
COL13A1-213ENST00000520267 SLCO2A1Q92959 643 aa27.37■■□□□ 1.97
COL13A1-213ENST00000520267 JPH2Q9BR39 696 aaPredicted RBP27.37■■□□□ 1.97
COL13A1-213ENST00000520267 RNPEPQ9H4A4 650 aa27.37■■□□□ 1.97
COL13A1-213ENST00000520267 NOVA2Q9UNW9 492 aaKnown RBP27.37■■□□□ 1.97
COL13A1-213ENST00000520267 SCINQ9Y6U3 715 aa27.37■■□□□ 1.97
COL13A1-213ENST00000520267 HBP1O60381 514 aa27.36■■□□□ 1.97
COL13A1-213ENST00000520267 BRD2P25440 801 aaKnown RBP27.36■■□□□ 1.97
COL13A1-213ENST00000520267 LSP1P33241 339 aa27.36■■□□□ 1.97
COL13A1-213ENST00000520267 MDH1P40925 334 aaKnown RBP27.36■■□□□ 1.97
COL13A1-213ENST00000520267 SLC26A2P50443 739 aa27.36■■□□□ 1.97
COL13A1-213ENST00000520267 PPP1R7Q15435 360 aa27.36■■□□□ 1.97
COL13A1-213ENST00000520267 UBAP2Q5T6F2 1119 aaKnown RBP27.36■■□□□ 1.97
COL13A1-213ENST00000520267 GADD45GIP1Q8TAE8 222 aaPredicted RBP27.36■■□□□ 1.97
COL13A1-213ENST00000520267 MINDY3Q9H8M7 445 aa27.36■■□□□ 1.97
COL13A1-213ENST00000520267 MTRF1LQ9UGC7 380 aaKnown RBP27.36■■□□□ 1.97
COL13A1-213ENST00000520267 USTQ9Y2C2 406 aa27.36■■□□□ 1.97
COL13A1-213ENST00000520267 MMP8P22894 467 aa27.36■■□□□ 1.97
COL13A1-213ENST00000520267 CCT5P48643 541 aa27.36■■□□□ 1.97
COL13A1-213ENST00000520267 EIF3BP55884 814 aaKnown RBP27.36■■□□□ 1.97
COL13A1-213ENST00000520267 KRT17Q04695 432 aa27.36■■□□□ 1.97
COL13A1-213ENST00000520267 TRPC3Q13507 836 aa27.36■■□□□ 1.97
COL13A1-213ENST00000520267 TFDP1Q14186 410 aa27.36■■□□□ 1.97
COL13A1-213ENST00000520267 TTLL4Q14679 1199 aa27.36■■□□□ 1.97
COL13A1-213ENST00000520267 RHOT1Q8IXI2 618 aa27.36■■□□□ 1.97
COL13A1-213ENST00000520267 FEZF2Q8TBJ5 459 aa27.36■■□□□ 1.97
COL13A1-213ENST00000520267 SPON1Q9HCB6 807 aa27.36■■□□□ 1.97
COL13A1-213ENST00000520267 PSTPIP1O43586 416 aa27.35■■□□□ 1.97
COL13A1-213ENST00000520267 NUDT17P0C025 328 aa27.35■■□□□ 1.97
COL13A1-213ENST00000520267 WEE2P0C1S8 567 aa27.35■■□□□ 1.97
COL13A1-213ENST00000520267 CYP2C8P10632 490 aa27.35■■□□□ 1.97
COL13A1-213ENST00000520267 SCARA5Q6ZMJ2 495 aa27.35■■□□□ 1.97
COL13A1-213ENST00000520267 USP50Q70EL3 339 aaPredicted RBP27.35■■□□□ 1.97
COL13A1-213ENST00000520267 SRLQ86TD4 932 aa27.35■■□□□ 1.97
COL13A1-213ENST00000520267 CCDC50Q8IVM0 306 aa27.35■■□□□ 1.97
COL13A1-213ENST00000520267 MAIP1Q8WWC4 291 aa27.35■■□□□ 1.97
COL13A1-213ENST00000520267 SEMA4AQ9H3S1 761 aa27.35■■□□□ 1.97
COL13A1-213ENST00000520267 PARVAQ9NVD7 372 aa27.35■■□□□ 1.97
COL13A1-213ENST00000520267 R3HDM2Q9Y2K5 976 aaKnown RBP27.35■■□□□ 1.97
COL13A1-213ENST00000520267 DCDC2CA8MYV0 355 aa27.34■■□□□ 1.97
COL13A1-213ENST00000520267 TMEM191BP0C7N4 346 aa27.34■■□□□ 1.97
COL13A1-213ENST00000520267 MBTD1Q05BQ5 628 aa27.34■■□□□ 1.97
COL13A1-213ENST00000520267 GJC2Q5T442 439 aaPredicted RBP27.34■■□□□ 1.97
COL13A1-213ENST00000520267 PPP1R2P3Q6NXS1 205 aa27.34■■□□□ 1.97
COL13A1-213ENST00000520267 TMEM192Q8IY95 271 aa27.34■■□□□ 1.97
COL13A1-213ENST00000520267 HEMGNQ9BXL5 484 aa27.34■■□□□ 1.97
COL13A1-213ENST00000520267 DCLK3Q9C098 648 aa27.34■■□□□ 1.97
COL13A1-213ENST00000520267 RRP15Q9Y3B9 282 aaKnown RBP27.34■■□□□ 1.97
COL13A1-213ENST00000520267 IQCF3P0C7M6 154 aa27.34■■□□□ 1.97
COL13A1-213ENST00000520267 RALAP11233 206 aa27.34■■□□□ 1.97
COL13A1-213ENST00000520267 RPL7AP62424 266 aaKnown RBP27.34■■□□□ 1.97
COL13A1-213ENST00000520267 PPARDQ03181 441 aa27.34■■□□□ 1.97
COL13A1-213ENST00000520267 TMEM132AQ24JP5 1023 aa27.34■■□□□ 1.97
COL13A1-213ENST00000520267 ARFGAP2Q8N6H7 521 aa27.34■■□□□ 1.97
COL13A1-213ENST00000520267 XYLT2Q9H1B5 865 aa27.34■■□□□ 1.97
COL13A1-213ENST00000520267 YBX3P16989 372 aaKnown RBP eCLIP27.33■■□□□ 1.97
COL13A1-213ENST00000520267 EPHX2P34913 555 aa27.33■■□□□ 1.97
COL13A1-213ENST00000520267 GJC1P36383 396 aa27.33■■□□□ 1.97
COL13A1-213ENST00000520267 IGBP1P78318 339 aa27.33■■□□□ 1.97
COL13A1-213ENST00000520267 SLC29A2Q14542 456 aa27.33■■□□□ 1.97
COL13A1-213ENST00000520267 ZNF699Q32M78 642 aa27.33■■□□□ 1.97
COL13A1-213ENST00000520267 DENND2CQ68D51 928 aa27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms