RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 LAMTOR5O43504 91 aa8.56□□□□□ -1.04
SDCBP-208ENST00000520228 NDUFS2O75306 463 aa8.56□□□□□ -1.04
SDCBP-208ENST00000520228 TOX4O94842 621 aa8.56□□□□□ -1.04
SDCBP-208ENST00000520228 DDX58O95786 925 aaKnown RBP8.56□□□□□ -1.04
SDCBP-208ENST00000520228 YY1P25490 414 aa8.56□□□□□ -1.04
SDCBP-208ENST00000520228 MCAMP43121 646 aa8.56□□□□□ -1.04
SDCBP-208ENST00000520228 PIN1Q13526 163 aaPredicted RBP8.56□□□□□ -1.04
SDCBP-208ENST00000520228 ACAP1Q15027 740 aa8.56□□□□□ -1.04
SDCBP-208ENST00000520228 ZNF568Q3ZCX4 644 aa8.56□□□□□ -1.04
SDCBP-208ENST00000520228 MUM1L1Q5H9M0 696 aa8.56□□□□□ -1.04
SDCBP-208ENST00000520228 ABHD15Q6UXT9 468 aa8.56□□□□□ -1.04
SDCBP-208ENST00000520228 PPP1R42Q7Z4L9 355 aa8.56□□□□□ -1.04
SDCBP-208ENST00000520228 CMTR2Q8IYT2 770 aaKnown RBP8.56□□□□□ -1.04
SDCBP-208ENST00000520228 SNX33Q8WV41 574 aa8.56□□□□□ -1.04
SDCBP-208ENST00000520228 RABGGTAQ92696 567 aa8.56□□□□□ -1.04
SDCBP-208ENST00000520228 ZNF622Q969S3 477 aaKnown RBP eCLIP8.56□□□□□ -1.04
SDCBP-208ENST00000520228 UTP14AQ9BVJ6 771 aaKnown RBP8.56□□□□□ -1.04
SDCBP-208ENST00000520228 AASDHPPTQ9NRN7 309 aa8.56□□□□□ -1.04
SDCBP-208ENST00000520228 LUC7L2Q9Y383 392 aaKnown RBP8.56□□□□□ -1.04
SDCBP-208ENST00000520228 C4AP0C0L4 1744 aa8.56□□□□□ -1.04
SDCBP-208ENST00000520228 UBN2Q6ZU65 1347 aa8.55□□□□□ -1.04
SDCBP-208ENST00000520228 E2F8A0AVK6 867 aa8.55□□□□□ -1.04
SDCBP-208ENST00000520228 KLRG2A4D1S0 409 aaPredicted RBP8.55□□□□□ -1.04
SDCBP-208ENST00000520228 SNUPNO95149 360 aaKnown RBP8.55□□□□□ -1.04
SDCBP-208ENST00000520228 VSIG10L2P0DP72 767 aa8.55□□□□□ -1.04
SDCBP-208ENST00000520228 HSP90B1P14625 803 aaKnown RBP8.55□□□□□ -1.04
SDCBP-208ENST00000520228 WASP42768 502 aa8.55□□□□□ -1.04
SDCBP-208ENST00000520228 BPIFB4P59827 614 aa8.55□□□□□ -1.04
SDCBP-208ENST00000520228 RAC3P60763 192 aa8.55□□□□□ -1.04
SDCBP-208ENST00000520228 DUSP8Q13202 625 aa8.55□□□□□ -1.04
SDCBP-208ENST00000520228 NFE2Q16621 373 aaPredicted RBP8.55□□□□□ -1.04
SDCBP-208ENST00000520228 TBC1D10BQ4KMP7 808 aaPredicted RBP8.55□□□□□ -1.04
SDCBP-208ENST00000520228 JDP2Q8WYK2 163 aa8.55□□□□□ -1.04
SDCBP-208ENST00000520228 GPHA2Q96T91 129 aa8.55□□□□□ -1.04
SDCBP-208ENST00000520228 PTPN18Q99952 460 aa8.55□□□□□ -1.04
SDCBP-208ENST00000520228 RTFDC1Q9BY42 306 aaPredicted RBP8.55□□□□□ -1.04
SDCBP-208ENST00000520228 RHOBTB2Q9BYZ6 727 aa8.55□□□□□ -1.04
SDCBP-208ENST00000520228 ADAM7Q9H2U9 754 aa8.55□□□□□ -1.04
SDCBP-208ENST00000520228 MSL2Q9HCI7 577 aa8.55□□□□□ -1.04
SDCBP-208ENST00000520228 ING3Q9NXR8 418 aa8.55□□□□□ -1.04
SDCBP-208ENST00000520228 PUF60Q9UHX1 559 aaKnown RBP8.55□□□□□ -1.04
SDCBP-208ENST00000520228 VIRMAQ69YN4 1812 aaKnown RBP8.54□□□□□ -1.04
SDCBP-208ENST00000520228 PRICKLE3O43900 615 aaPredicted RBP8.54□□□□□ -1.04
SDCBP-208ENST00000520228 ALDH1A2O94788 518 aa8.54□□□□□ -1.04
SDCBP-208ENST00000520228 NTSR2O95665 410 aa8.54□□□□□ -1.04
SDCBP-208ENST00000520228 JUNP05412 331 aaKnown RBP8.54□□□□□ -1.04
SDCBP-208ENST00000520228 SRGNP10124 158 aa8.54□□□□□ -1.04
SDCBP-208ENST00000520228 WNT3AP56704 352 aa8.54□□□□□ -1.04
SDCBP-208ENST00000520228 SLFN5Q08AF3 891 aa8.54□□□□□ -1.04
SDCBP-208ENST00000520228 SLFN13Q68D06 897 aa8.54□□□□□ -1.04
SDCBP-208ENST00000520228 ADGRE4PQ86SQ3 457 aa8.54□□□□□ -1.04
SDCBP-208ENST00000520228 ANKRD53Q8N9V6 530 aa8.54□□□□□ -1.04
SDCBP-208ENST00000520228 GPR156Q8NFN8 814 aa8.54□□□□□ -1.04
SDCBP-208ENST00000520228 RIN2Q8WYP3 895 aaPredicted RBP8.54□□□□□ -1.04
SDCBP-208ENST00000520228 HOXB13Q92826 284 aaPredicted RBP8.54□□□□□ -1.04
SDCBP-208ENST00000520228 MASTLQ96GX5 879 aa8.54□□□□□ -1.04
SDCBP-208ENST00000520228 TEPSINQ96N21 525 aa8.54□□□□□ -1.04
SDCBP-208ENST00000520228 ISCA1Q9BUE6 129 aa8.54□□□□□ -1.04
SDCBP-208ENST00000520228 CDH19Q9H159 772 aa8.54□□□□□ -1.04
SDCBP-208ENST00000520228 DMRT3Q9NQL9 472 aa8.54□□□□□ -1.04
SDCBP-208ENST00000520228 PPP4R1LQ9P1A2 415 aa8.54□□□□□ -1.04
SDCBP-208ENST00000520228 TRMT112Q9UI30 125 aaKnown RBP8.54□□□□□ -1.04
SDCBP-208ENST00000520228 OAZ3Q9UMX2 235 aa8.54□□□□□ -1.04
SDCBP-208ENST00000520228 G3BP2Q9UN86 482 aaKnown RBP8.54□□□□□ -1.04
SDCBP-208ENST00000520228 RPTORQ8N122 1335 aa8.54□□□□□ -1.04
SDCBP-208ENST00000520228 IBTKQ9P2D0 1353 aaPredicted RBP8.53□□□□□ -1.04
SDCBP-208ENST00000520228 A0A0G2JLL6 359 aaPredicted RBP8.53□□□□□ -1.04
SDCBP-208ENST00000520228 PI4KAP2A4QPH2 592 aa8.53□□□□□ -1.04
SDCBP-208ENST00000520228 SLC26A4O43511 780 aa8.53□□□□□ -1.04
SDCBP-208ENST00000520228 PLATP00750 562 aa8.53□□□□□ -1.04
SDCBP-208ENST00000520228 INHBBP09529 407 aa8.53□□□□□ -1.04
SDCBP-208ENST00000520228 NPR1P16066 1061 aa8.53□□□□□ -1.04
SDCBP-208ENST00000520228 ADKP55263 362 aaKnown RBP8.53□□□□□ -1.04
SDCBP-208ENST00000520228 KSR2Q6VAB6 950 aa8.53□□□□□ -1.04
SDCBP-208ENST00000520228 G2E3Q7L622 706 aa8.53□□□□□ -1.04
SDCBP-208ENST00000520228 LILRA3Q8N6C8 439 aaPredicted RBP8.53□□□□□ -1.04
SDCBP-208ENST00000520228 PI4KAP1Q8N8J0 262 aa8.53□□□□□ -1.04
SDCBP-208ENST00000520228 LMF1Q96S06 567 aa8.53□□□□□ -1.04
SDCBP-208ENST00000520228 MYD88Q99836 296 aa8.53□□□□□ -1.04
SDCBP-208ENST00000520228 SSBP3Q9BWW4 388 aaPredicted RBP8.53□□□□□ -1.04
SDCBP-208ENST00000520228 ENKD1Q9H0I2 346 aa8.53□□□□□ -1.04
SDCBP-208ENST00000520228 AGO3Q9H9G7 860 aaKnown RBP8.53□□□□□ -1.04
SDCBP-208ENST00000520228 RBM12Q9NTZ6 932 aaKnown RBP8.53□□□□□ -1.04
SDCBP-208ENST00000520228 MAP3K2Q9Y2U5 619 aa8.53□□□□□ -1.04
SDCBP-208ENST00000520228 GOLGB1Q14789 3259 aaKnown RBP8.53□□□□□ -1.04
SDCBP-208ENST00000520228 RNF123Q5XPI4 1314 aa8.53□□□□□ -1.04
SDCBP-208ENST00000520228 UTRNP46939 3433 aa8.52□□□□□ -1.04
SDCBP-208ENST00000520228 ABCC12Q96J65 1359 aa8.52□□□□□ -1.05
SDCBP-208ENST00000520228 HOXA5P20719 270 aa8.52□□□□□ -1.05
SDCBP-208ENST00000520228 NEXNQ0ZGT2 675 aa8.52□□□□□ -1.05
SDCBP-208ENST00000520228 MST1LQ2TV78 715 aa8.52□□□□□ -1.05
SDCBP-208ENST00000520228 CRY2Q49AN0 593 aa8.52□□□□□ -1.05
SDCBP-208ENST00000520228 SLC10A5Q5PT55 438 aa8.52□□□□□ -1.05
SDCBP-208ENST00000520228 TTLL10Q6ZVT0 673 aa8.52□□□□□ -1.05
SDCBP-208ENST00000520228 GPR135Q8IZ08 494 aa8.52□□□□□ -1.05
SDCBP-208ENST00000520228 PPM1NQ8N819 430 aa8.52□□□□□ -1.05
SDCBP-208ENST00000520228 COA7Q96BR5 231 aa8.52□□□□□ -1.05
SDCBP-208ENST00000520228 DPYSL5Q9BPU6 564 aa8.52□□□□□ -1.05
SDCBP-208ENST00000520228 RTEL1Q9NZ71 1219 aa8.52□□□□□ -1.05
SDCBP-208ENST00000520228 IP6K2Q9UHH9 426 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms